RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 MUC7Q8TAX7 377 aa12.56□□□□□ -0.4
TNFSF9-201ENST00000245817 LITAFQ99732 161 aa12.56□□□□□ -0.4
TNFSF9-201ENST00000245817 RPL24P83731 157 aaKnown RBP12.55□□□□□ -0.4
TNFSF9-201ENST00000245817 NHP2Q9NX24 153 aaKnown RBP12.55□□□□□ -0.4
TNFSF9-201ENST00000245817 CSMD3Q7Z407 3707 aa12.55□□□□□ -0.4
TNFSF9-201ENST00000245817 SMIM13P0DJ93 91 aa12.54□□□□□ -0.4
TNFSF9-201ENST00000245817 SPAG11BQ08648 103 aa12.54□□□□□ -0.4
TNFSF9-201ENST00000245817 ADAMTSL4-AS1Q5T5F5 129 aa12.54□□□□□ -0.4
TNFSF9-201ENST00000245817 COPS9Q8WXC6 57 aa12.54□□□□□ -0.4
TNFSF9-201ENST00000245817 A0A0U1RRA0 63 aa12.54□□□□□ -0.4
TNFSF9-201ENST00000245817 MUSTN1Q8IVN3 82 aa12.54□□□□□ -0.4
TNFSF9-201ENST00000245817 KIAA0087Q14695 138 aa12.53□□□□□ -0.4
TNFSF9-201ENST00000245817 KRTAP26-1Q6PEX3 210 aa12.53□□□□□ -0.4
TNFSF9-201ENST00000245817 IFITM1P13164 125 aa12.52□□□□□ -0.4
TNFSF9-201ENST00000245817 LINC00158P58513 81 aa12.51□□□□□ -0.41
TNFSF9-201ENST00000245817 C2orf82Q6UX34 121 aa12.51□□□□□ -0.41
TNFSF9-201ENST00000245817 DYNC2H1Q8NCM8 4307 aaKnown RBP12.51□□□□□ -0.41
TNFSF9-201ENST00000245817 ZNF561-AS1K7EIQ3 104 aa12.51□□□□□ -0.41
TNFSF9-201ENST00000245817 DAND5Q8N907 189 aa12.51□□□□□ -0.41
TNFSF9-201ENST00000245817 C3orf84H3BNL1 204 aa12.5□□□□□ -0.41
TNFSF9-201ENST00000245817 NPC2P61916 151 aa12.5□□□□□ -0.41
TNFSF9-201ENST00000245817 COX11Q9Y6N1 276 aa12.5□□□□□ -0.41
TNFSF9-201ENST00000245817 PFN2P35080 140 aa12.49□□□□□ -0.41
TNFSF9-201ENST00000245817 RAB37Q96AX2 223 aa12.49□□□□□ -0.41
TNFSF9-201ENST00000245817 ERG28Q9UKR5 140 aa12.49□□□□□ -0.41
TNFSF9-201ENST00000245817 STARD9Q9P2P6 4700 aa12.49□□□□□ -0.41
TNFSF9-201ENST00000245817 TAX1BP3O14907 124 aa12.48□□□□□ -0.41
TNFSF9-201ENST00000245817 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.48□□□□□ -0.41
TNFSF9-201ENST00000245817 A0A1B0GV90 55 aa12.48□□□□□ -0.41
TNFSF9-201ENST00000245817 A4D1N5 150 aa12.48□□□□□ -0.41
TNFSF9-201ENST00000245817 K7ERJ3 54 aa12.47□□□□□ -0.41
TNFSF9-201ENST00000245817 HIGD2BQ4VC39 106 aa12.47□□□□□ -0.41
TNFSF9-201ENST00000245817 LINC00308Q8TCZ7 52 aa12.47□□□□□ -0.41
TNFSF9-201ENST00000245817 PLECQ15149 4684 aaKnown RBP12.46□□□□□ -0.41
TNFSF9-201ENST00000245817 TTC32Q5I0X7 151 aa12.46□□□□□ -0.41
TNFSF9-201ENST00000245817 C6orf223Q8N319 242 aa12.46□□□□□ -0.41
TNFSF9-201ENST00000245817 MIR7-3HGQ8N6C7 128 aa12.46□□□□□ -0.41
TNFSF9-201ENST00000245817 LINC00526Q96FQ7 95 aa12.46□□□□□ -0.41
TNFSF9-201ENST00000245817 A0A1B0GWB2 263 aa12.45□□□□□ -0.42
TNFSF9-201ENST00000245817 COX17Q14061 63 aa12.45□□□□□ -0.42
TNFSF9-201ENST00000245817 CASC10Q5T4H9 136 aa12.45□□□□□ -0.42
TNFSF9-201ENST00000245817 NTN5Q8WTR8 489 aaPredicted RBP12.45□□□□□ -0.42
TNFSF9-201ENST00000245817 UNQ6190/PRO20217Q6UXQ8 127 aa12.45□□□□□ -0.42
TNFSF9-201ENST00000245817 C15orf56Q8N910 161 aa12.44□□□□□ -0.42
TNFSF9-201ENST00000245817 CAMK2N2Q96S95 79 aa12.44□□□□□ -0.42
TNFSF9-201ENST00000245817 CFC1BP0CG36 223 aa12.43□□□□□ -0.42
TNFSF9-201ENST00000245817 CFC1P0CG37 223 aa12.43□□□□□ -0.42
TNFSF9-201ENST00000245817 C9orf118A6NHY6 69 aa12.42□□□□□ -0.42
TNFSF9-201ENST00000245817 C2orf48Q96LS8 159 aa12.42□□□□□ -0.42
TNFSF9-201ENST00000245817 F8WDY8 70 aa12.42□□□□□ -0.42
TNFSF9-201ENST00000245817 GVQW2A0A096LPI5 108 aaPredicted RBP12.41□□□□□ -0.42
TNFSF9-201ENST00000245817 A0A0B4J2C4 111 aa12.41□□□□□ -0.42
TNFSF9-201ENST00000245817 NBDYA0A0U1RRE5 68 aa12.41□□□□□ -0.42
TNFSF9-201ENST00000245817 PSCAO43653 123 aa12.41□□□□□ -0.42
TNFSF9-201ENST00000245817 C10orf25Q5T742 122 aa12.41□□□□□ -0.42
TNFSF9-201ENST00000245817 KRTAP1-5Q9BYS1 174 aa12.41□□□□□ -0.42
TNFSF9-201ENST00000245817 PPDPFQ9H3Y8 114 aa12.41□□□□□ -0.42
TNFSF9-201ENST00000245817 H3BUT2 72 aa12.4□□□□□ -0.42
TNFSF9-201ENST00000245817 PRO1854Q9UHT4 67 aa12.4□□□□□ -0.42
TNFSF9-201ENST00000245817 TRBV30A0A0K0K1B3 111 aa12.39□□□□□ -0.43
TNFSF9-201ENST00000245817 C9orf116Q5BN46 136 aaPredicted RBP12.39□□□□□ -0.43
TNFSF9-201ENST00000245817 USP17L23D6RBM5 183 aa12.38□□□□□ -0.43
TNFSF9-201ENST00000245817 EIF4EBP3O60516 100 aaPredicted RBP12.38□□□□□ -0.43
TNFSF9-201ENST00000245817 SOSTDC1Q6X4U4 206 aa12.38□□□□□ -0.43
TNFSF9-201ENST00000245817 TENM2Q9NT68 2774 aa12.38□□□□□ -0.43
TNFSF9-201ENST00000245817 PGPEP1Q9NXJ5 209 aa12.38□□□□□ -0.43
TNFSF9-201ENST00000245817 VAMP3Q15836 100 aa12.37□□□□□ -0.43
TNFSF9-201ENST00000245817 LYSTQ99698 3801 aa12.36□□□□□ -0.43
TNFSF9-201ENST00000245817 NAA38Q9BRA0 125 aaKnown RBP12.36□□□□□ -0.43
TNFSF9-201ENST00000245817 SND1-IT1Q9HBX3 110 aa12.36□□□□□ -0.43
TNFSF9-201ENST00000245817 C6orf48Q9UBA6 75 aa12.36□□□□□ -0.43
TNFSF9-201ENST00000245817 SYCNQ0VAF6 134 aa12.35□□□□□ -0.43
TNFSF9-201ENST00000245817 Q6ZRU5 148 aa12.35□□□□□ -0.43
TNFSF9-201ENST00000245817 Q1RN00 199 aa12.34□□□□□ -0.43
TNFSF9-201ENST00000245817 FABP2P12104 132 aa12.33□□□□□ -0.44
TNFSF9-201ENST00000245817 A0A1W2PPM0 123 aa12.32□□□□□ -0.44
TNFSF9-201ENST00000245817 H7C2G1 150 aa12.32□□□□□ -0.44
TNFSF9-201ENST00000245817 LECT2O14960 151 aa12.32□□□□□ -0.44
TNFSF9-201ENST00000245817 TSPAN13O95857 204 aa12.32□□□□□ -0.44
TNFSF9-201ENST00000245817 CARD19Q96LW7 228 aa12.32□□□□□ -0.44
TNFSF9-201ENST00000245817 LOC107984156A0A0G2JMH3 177 aa12.31□□□□□ -0.44
TNFSF9-201ENST00000245817 M0R2N4 97 aa12.31□□□□□ -0.44
TNFSF9-201ENST00000245817 ARL17AQ8IVW1 177 aa12.31□□□□□ -0.44
TNFSF9-201ENST00000245817 TRAV13-2A0A0B4J235 113 aa12.29□□□□□ -0.44
TNFSF9-201ENST00000245817 LY6G6CO95867 125 aa12.29□□□□□ -0.44
TNFSF9-201ENST00000245817 RPL13AP40429 203 aaKnown RBP12.29□□□□□ -0.44
TNFSF9-201ENST00000245817 PSMB2P49721 201 aa12.29□□□□□ -0.44
TNFSF9-201ENST00000245817 C14orf177Q52M58 125 aa12.29□□□□□ -0.44
TNFSF9-201ENST00000245817 LYRM7Q5U5X0 104 aa12.29□□□□□ -0.44
TNFSF9-201ENST00000245817 NDUFC2-KCTD14E9PQ53 114 aa12.28□□□□□ -0.44
TNFSF9-201ENST00000245817 RNF151Q2KHN1 245 aa12.28□□□□□ -0.44
TNFSF9-201ENST00000245817 GAGE10A6NGK3 116 aa12.27□□□□□ -0.45
TNFSF9-201ENST00000245817 GTF2H5Q6ZYL4 71 aa12.27□□□□□ -0.45
TNFSF9-201ENST00000245817 NDUFC2O95298 119 aa12.26□□□□□ -0.45
TNFSF9-201ENST00000245817 SCGB1C2P0DMR2 95 aa12.26□□□□□ -0.45
TNFSF9-201ENST00000245817 SPCS1Q9Y6A9 102 aa12.26□□□□□ -0.45
TNFSF9-201ENST00000245817 IGKV2-28A0A075B6P5 120 aa12.24□□□□□ -0.45
TNFSF9-201ENST00000245817 IGKV2D-28P01615 120 aa12.24□□□□□ -0.45
TNFSF9-201ENST00000245817 OR13C6PQ8NH95 151 aa12.24□□□□□ -0.45
TNFSF9-201ENST00000245817 VPS13DQ5THJ4 4388 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms