RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 COL6A5A8TX70 2615 aa8.38□□□□□ -1.07
SOX9-201ENST00000245479 UPK3BQ9BT76 320 aa8.38□□□□□ -1.07
SOX9-201ENST00000245479 ZNF702PQ9H963 129 aa8.38□□□□□ -1.07
SOX9-201ENST00000245479 UBE2D4Q9Y2X8 147 aa8.37□□□□□ -1.07
SOX9-201ENST00000245479 IGLV10-54A0A075B6I4 117 aa8.37□□□□□ -1.07
SOX9-201ENST00000245479 DSCR9P59020 149 aa8.37□□□□□ -1.07
SOX9-201ENST00000245479 WFDC9Q8NEX5 89 aa8.37□□□□□ -1.07
SOX9-201ENST00000245479 KIF25-AS1Q9Y6Z4 181 aa8.37□□□□□ -1.07
SOX9-201ENST00000245479 MAP6D1Q9H9H5 199 aa8.36□□□□□ -1.07
SOX9-201ENST00000245479 K7EQD1 137 aa8.36□□□□□ -1.07
SOX9-201ENST00000245479 DNAJC9-AS1A6NH13 148 aa8.35□□□□□ -1.07
SOX9-201ENST00000245479 TMEM256-PLSCR3K7ERE1 68 aa8.35□□□□□ -1.07
SOX9-201ENST00000245479 NDUFC2O95298 119 aa8.35□□□□□ -1.07
SOX9-201ENST00000245479 LINC00315P59091 139 aa8.35□□□□□ -1.07
SOX9-201ENST00000245479 LINC00482Q8N8I6 264 aa8.35□□□□□ -1.07
SOX9-201ENST00000245479 PDZD2O15018 2839 aa8.34□□□□□ -1.07
SOX9-201ENST00000245479 SMIM11BQ8TCY0 68 aa8.34□□□□□ -1.07
SOX9-201ENST00000245479 Q6YL49 198 aa8.34□□□□□ -1.07
SOX9-201ENST00000245479 AMELXQ99217 191 aa8.34□□□□□ -1.07
SOX9-201ENST00000245479 TRAV25A0A0B4J276 109 aa8.34□□□□□ -1.08
SOX9-201ENST00000245479 Q6JHZ5 121 aa8.34□□□□□ -1.08
SOX9-201ENST00000245479 DAD1P61803 113 aa8.33□□□□□ -1.08
SOX9-201ENST00000245479 SNURFQ9Y675 71 aa8.32□□□□□ -1.08
SOX9-201ENST00000245479 DEFB114Q30KQ6 69 aa8.32□□□□□ -1.08
SOX9-201ENST00000245479 LINC00242Q5T6M2 205 aa8.32□□□□□ -1.08
SOX9-201ENST00000245479 FAM222AQ5U5X8 452 aa8.32□□□□□ -1.08
SOX9-201ENST00000245479 KIR2DL5BQ8NHK3 375 aa8.32□□□□□ -1.08
SOX9-201ENST00000245479 Q8N2B8 174 aa8.31□□□□□ -1.08
SOX9-201ENST00000245479 MPLKIPQ8TAP9 179 aa8.31□□□□□ -1.08
SOX9-201ENST00000245479 LINC00846Q9NV44 126 aa8.31□□□□□ -1.08
SOX9-201ENST00000245479 COX6A2Q02221 97 aa8.31□□□□□ -1.08
SOX9-201ENST00000245479 NSD1Q96L73 2696 aaPredicted RBP8.31□□□□□ -1.08
SOX9-201ENST00000245479 ATP5EP2Q5VTU8 51 aa8.3□□□□□ -1.08
SOX9-201ENST00000245479 VWFP04275 2813 aa8.3□□□□□ -1.08
SOX9-201ENST00000245479 CRYGAP11844 174 aa8.3□□□□□ -1.08
SOX9-201ENST00000245479 ANGP03950 147 aaKnown RBP8.3□□□□□ -1.08
SOX9-201ENST00000245479 A0A087WYN8 130 aa8.29□□□□□ -1.08
SOX9-201ENST00000245479 SMIM1B2RUZ4 78 aa8.29□□□□□ -1.08
SOX9-201ENST00000245479 SCXQ7RTU7 201 aa8.29□□□□□ -1.08
SOX9-201ENST00000245479 TRBV10-1A0A0K0K1A3 114 aa8.29□□□□□ -1.08
SOX9-201ENST00000245479 ODF3L2Q3SX64 289 aa8.29□□□□□ -1.08
SOX9-201ENST00000245479 CHCHD7Q9BUK0 85 aa8.28□□□□□ -1.08
SOX9-201ENST00000245479 DEFB135Q30KP9 77 aa8.28□□□□□ -1.08
SOX9-201ENST00000245479 J3QLI3 93 aa8.28□□□□□ -1.08
SOX9-201ENST00000245479 RPL28P46779 137 aaKnown RBP8.28□□□□□ -1.08
SOX9-201ENST00000245479 C4orf26Q17RF5 130 aa8.28□□□□□ -1.08
SOX9-201ENST00000245479 FBN1P35555 2871 aaKnown RBP8.27□□□□□ -1.08
SOX9-201ENST00000245479 CCL18P55774 89 aa8.27□□□□□ -1.09
SOX9-201ENST00000245479 DPH3Q96FX2 82 aa8.27□□□□□ -1.09
SOX9-201ENST00000245479 IBA57-AS1B1ANH7 110 aa8.27□□□□□ -1.09
SOX9-201ENST00000245479 PRB2P02812 416 aaPredicted RBP8.27□□□□□ -1.09
SOX9-201ENST00000245479 HILS1P60008 231 aa8.26□□□□□ -1.09
SOX9-201ENST00000245479 SMCR5Q8TEV8 140 aa8.26□□□□□ -1.09
SOX9-201ENST00000245479 FAM19A1Q7Z5A9 133 aa8.26□□□□□ -1.09
SOX9-201ENST00000245479 LINC01006Q8NI28 216 aa8.26□□□□□ -1.09
SOX9-201ENST00000245479 TENM4Q6N022 2769 aa8.25□□□□□ -1.09
SOX9-201ENST00000245479 RPS28P62857 69 aaKnown RBP8.25□□□□□ -1.09
SOX9-201ENST00000245479 C6orf99Q4VX62 202 aa8.25□□□□□ -1.09
SOX9-201ENST00000245479 FAM218AQ96MZ4 157 aa8.24□□□□□ -1.09
SOX9-201ENST00000245479 NDUFC2-KCTD14E9PQ53 114 aa8.24□□□□□ -1.09
SOX9-201ENST00000245479 CMC4P56277 68 aaPredicted RBP8.24□□□□□ -1.09
SOX9-201ENST00000245479 LITAFQ99732 161 aa8.24□□□□□ -1.09
SOX9-201ENST00000245479 BAHCC1Q9P281 2608 aa8.24□□□□□ -1.09
SOX9-201ENST00000245479 INAFM1C9JVW0 142 aa8.24□□□□□ -1.09
SOX9-201ENST00000245479 EIF4EBP3O60516 100 aaPredicted RBP8.24□□□□□ -1.09
SOX9-201ENST00000245479 F8WEM9 126 aa8.23□□□□□ -1.09
SOX9-201ENST00000245479 J3QKU1 62 aa8.23□□□□□ -1.09
SOX9-201ENST00000245479 CCKP06307 115 aa8.23□□□□□ -1.09
SOX9-201ENST00000245479 GYPEP15421 78 aa8.23□□□□□ -1.09
SOX9-201ENST00000245479 LINC00337Q8N6G1 96 aa8.23□□□□□ -1.09
SOX9-201ENST00000245479 C4orf3Q8WVX3 66 aa8.23□□□□□ -1.09
SOX9-201ENST00000245479 CDC42SE2Q9NRR3 84 aa8.23□□□□□ -1.09
SOX9-201ENST00000245479 NREPQ16612 68 aa8.22□□□□□ -1.09
SOX9-201ENST00000245479 SOSTDC1Q6X4U4 206 aa8.22□□□□□ -1.09
SOX9-201ENST00000245479 TENM1Q9UKZ4 2725 aa8.22□□□□□ -1.09
SOX9-201ENST00000245479 SMIM26A0A096LP01 95 aa8.22□□□□□ -1.09
SOX9-201ENST00000245479 DEFB121Q5J5C9 76 aa8.22□□□□□ -1.09
SOX9-201ENST00000245479 C1orf158Q8N1D5 194 aa8.22□□□□□ -1.09
SOX9-201ENST00000245479 IGHV4-28A0A0C4DH34 117 aa8.22□□□□□ -1.09
SOX9-201ENST00000245479 TMEM89A2RUT3 159 aa8.21□□□□□ -1.09
SOX9-201ENST00000245479 SERP1Q9Y6X1 66 aa8.21□□□□□ -1.09
SOX9-201ENST00000245479 V9GYY9 64 aa8.21□□□□□ -1.09
SOX9-201ENST00000245479 OTOGQ6ZRI0 2925 aa8.21□□□□□ -1.1
SOX9-201ENST00000245479 DEFB105AQ8NG35 78 aa8.21□□□□□ -1.1
SOX9-201ENST00000245479 ZNF469Q96JG9 3925 aaPredicted RBP8.21□□□□□ -1.1
SOX9-201ENST00000245479 FAM19A4Q96LR4 140 aa8.2□□□□□ -1.1
SOX9-201ENST00000245479 ZNF561-AS1K7EIQ3 104 aa8.2□□□□□ -1.1
SOX9-201ENST00000245479 C16orf74Q96GX8 76 aa8.2□□□□□ -1.1
SOX9-201ENST00000245479 TRAV7A0A075B6U4 112 aa8.19□□□□□ -1.1
SOX9-201ENST00000245479 PDE6GP18545 87 aa8.19□□□□□ -1.1
SOX9-201ENST00000245479 PRR3P79522 188 aaKnown RBP8.18□□□□□ -1.1
SOX9-201ENST00000245479 C1orf195Q5TG92 126 aa8.18□□□□□ -1.1
SOX9-201ENST00000245479 Q6ZQY7 126 aa8.18□□□□□ -1.1
SOX9-201ENST00000245479 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.18□□□□□ -1.1
SOX9-201ENST00000245479 LINC00269Q8N2A0 174 aa8.18□□□□□ -1.1
SOX9-201ENST00000245479 Q8N3U1 123 aa8.18□□□□□ -1.1
SOX9-201ENST00000245479 IGLV5-39A0A0G2JS06 123 aa8.17□□□□□ -1.1
SOX9-201ENST00000245479 TRBV6-4A0A1B0GX49 114 aa8.17□□□□□ -1.1
SOX9-201ENST00000245479 DIRC1Q969H9 104 aa8.17□□□□□ -1.1
SOX9-201ENST00000245479 IGLV4-60A0A075B6I1 120 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms