RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 FAM222AQ5U5X8 452 aa11.72□□□□□ -0.53
SSPN-201ENST00000242729 HTN3P15516 51 aa11.72□□□□□ -0.53
SSPN-201ENST00000242729 A0A087WYN8 130 aa11.71□□□□□ -0.53
SSPN-201ENST00000242729 CMC4P56277 68 aaPredicted RBP11.71□□□□□ -0.54
SSPN-201ENST00000242729 SMIM11BQ8TCY0 68 aa11.7□□□□□ -0.54
SSPN-201ENST00000242729 SLPIP03973 132 aa11.7□□□□□ -0.54
SSPN-201ENST00000242729 C9orf129Q5T035 196 aaKnown RBP11.7□□□□□ -0.54
SSPN-201ENST00000242729 CFAP161Q6P656 301 aa11.69□□□□□ -0.54
SSPN-201ENST00000242729 X6R8D5 127 aa11.69□□□□□ -0.54
SSPN-201ENST00000242729 NHLRC4P0CG21 123 aaPredicted RBP11.69□□□□□ -0.54
SSPN-201ENST00000242729 LINC00526Q96FQ7 95 aa11.69□□□□□ -0.54
SSPN-201ENST00000242729 C9orf116Q5BN46 136 aaPredicted RBP11.68□□□□□ -0.54
SSPN-201ENST00000242729 LINC00269Q8N2A0 174 aa11.68□□□□□ -0.54
SSPN-201ENST00000242729 LY6G6DO95868 133 aa11.68□□□□□ -0.54
SSPN-201ENST00000242729 INAFM1C9JVW0 142 aa11.67□□□□□ -0.54
SSPN-201ENST00000242729 NDUFV3P56181 108 aaKnown RBP11.67□□□□□ -0.54
SSPN-201ENST00000242729 A0A087WZ39 114 aa11.67□□□□□ -0.54
SSPN-201ENST00000242729 J3QKU1 62 aa11.67□□□□□ -0.54
SSPN-201ENST00000242729 COPS9Q8WXC6 57 aa11.67□□□□□ -0.54
SSPN-201ENST00000242729 C22orf24Q9Y442 160 aa11.67□□□□□ -0.54
SSPN-201ENST00000242729 KMT2BQ9UMN6 2715 aaPredicted RBP11.66□□□□□ -0.54
SSPN-201ENST00000242729 B5MCH6 92 aa11.66□□□□□ -0.54
SSPN-201ENST00000242729 SMCR5Q8TEV8 140 aa11.66□□□□□ -0.54
SSPN-201ENST00000242729 FLNBO75369 2602 aaKnown RBP11.65□□□□□ -0.54
SSPN-201ENST00000242729 GAGE2AQ6NT46 116 aa11.65□□□□□ -0.54
SSPN-201ENST00000242729 C3orf56Q8N813 242 aa11.65□□□□□ -0.54
SSPN-201ENST00000242729 TRAV13-2A0A0B4J235 113 aa11.65□□□□□ -0.54
SSPN-201ENST00000242729 CCDC179H3BU77 68 aa11.65□□□□□ -0.54
SSPN-201ENST00000242729 ANGP03950 147 aaKnown RBP11.64□□□□□ -0.55
SSPN-201ENST00000242729 FAM110AQ9BQ89 295 aa11.64□□□□□ -0.55
SSPN-201ENST00000242729 LECT2O14960 151 aa11.64□□□□□ -0.55
SSPN-201ENST00000242729 CELA1Q9UNI1 258 aa11.64□□□□□ -0.55
SSPN-201ENST00000242729 SS18L2Q9UHA2 77 aa11.63□□□□□ -0.55
SSPN-201ENST00000242729 LINC01600Q96MT4 127 aa11.63□□□□□ -0.55
SSPN-201ENST00000242729 PRO0255Q9UI72 69 aa11.63□□□□□ -0.55
SSPN-201ENST00000242729 SS18Q15532 418 aa11.62□□□□□ -0.55
SSPN-201ENST00000242729 DNAL4O96015 105 aa11.62□□□□□ -0.55
SSPN-201ENST00000242729 C14orf132Q9NPU4 83 aa11.62□□□□□ -0.55
SSPN-201ENST00000242729 FBN1P35555 2871 aaKnown RBP11.61□□□□□ -0.55
SSPN-201ENST00000242729 RPL28P46779 137 aaKnown RBP11.61□□□□□ -0.55
SSPN-201ENST00000242729 TRACP01848 142 aa11.61□□□□□ -0.55
SSPN-201ENST00000242729 KIR2DL5BQ8NHK3 375 aa11.61□□□□□ -0.55
SSPN-201ENST00000242729 IGHV4-28A0A0C4DH34 117 aa11.6□□□□□ -0.55
SSPN-201ENST00000242729 IBA57-AS1B1ANH7 110 aa11.6□□□□□ -0.55
SSPN-201ENST00000242729 MALP21145 153 aa11.6□□□□□ -0.55
SSPN-201ENST00000242729 STAB1Q9NY15 2570 aa11.6□□□□□ -0.55
SSPN-201ENST00000242729 NCR3O14931 201 aa11.59□□□□□ -0.55
SSPN-201ENST00000242729 DEFB121Q5J5C9 76 aa11.59□□□□□ -0.55
SSPN-201ENST00000242729 C6orf223Q8N319 242 aa11.59□□□□□ -0.55
SSPN-201ENST00000242729 DAD1P61803 113 aa11.58□□□□□ -0.56
SSPN-201ENST00000242729 CHCHD10Q8WYQ3 142 aaPredicted RBP11.58□□□□□ -0.56
SSPN-201ENST00000242729 NOTCH1P46531 2555 aa11.57□□□□□ -0.56
SSPN-201ENST00000242729 TENM3Q9P273 2699 aa11.56□□□□□ -0.56
SSPN-201ENST00000242729 REG3AQ06141 175 aa11.56□□□□□ -0.56
SSPN-201ENST00000242729 FAM236AA0A1B0GUQ0 79 aa11.55□□□□□ -0.56
SSPN-201ENST00000242729 FAM236BA0A1B0GV22 79 aa11.55□□□□□ -0.56
SSPN-201ENST00000242729 LINC00612Q8N6U2 182 aa11.55□□□□□ -0.56
SSPN-201ENST00000242729 Q8NDZ9 215 aa11.55□□□□□ -0.56
SSPN-201ENST00000242729 FAM240AA0A1B0GVK7 77 aa11.54□□□□□ -0.56
SSPN-201ENST00000242729 C10orf25Q5T742 122 aa11.54□□□□□ -0.56
SSPN-201ENST00000242729 MAST4O15021 2626 aa11.53□□□□□ -0.56
SSPN-201ENST00000242729 A0A1B0GUV1 79 aa11.52□□□□□ -0.56
SSPN-201ENST00000242729 ANK2Q01484 3957 aa11.52□□□□□ -0.56
SSPN-201ENST00000242729 KLK12Q9UKR0 248 aa11.52□□□□□ -0.57
SSPN-201ENST00000242729 C9orf66Q5T8R8 295 aa11.51□□□□□ -0.57
SSPN-201ENST00000242729 Q8IZM0 81 aa11.51□□□□□ -0.57
SSPN-201ENST00000242729 UNQ6190/PRO20217Q6UXQ8 127 aa11.51□□□□□ -0.57
SSPN-201ENST00000242729 F8P00451 2351 aa11.51□□□□□ -0.57
SSPN-201ENST00000242729 KIAA0087Q14695 138 aa11.5□□□□□ -0.57
SSPN-201ENST00000242729 IGKV3D-7A0A0C4DH55 119 aa11.5□□□□□ -0.57
SSPN-201ENST00000242729 SDIM1Q6ZPB5 146 aa11.5□□□□□ -0.57
SSPN-201ENST00000242729 RETNQ9HD89 108 aa11.5□□□□□ -0.57
SSPN-201ENST00000242729 CD164L2Q6UWJ8 174 aa11.49□□□□□ -0.57
SSPN-201ENST00000242729 NANOS2P60321 138 aaKnown RBP11.49□□□□□ -0.57
SSPN-201ENST00000242729 Q6Q795 121 aa11.48□□□□□ -0.57
SSPN-201ENST00000242729 SMIM9A6NGZ8 99 aa11.48□□□□□ -0.57
SSPN-201ENST00000242729 LYRM9A8MSI8 78 aa11.48□□□□□ -0.57
SSPN-201ENST00000242729 Q8NAQ8 132 aa11.47□□□□□ -0.57
SSPN-201ENST00000242729 H0YGX0 51 aa11.47□□□□□ -0.57
SSPN-201ENST00000242729 INAFM2P0DMQ5 153 aa11.46□□□□□ -0.57
SSPN-201ENST00000242729 IGHV4-30-4P0DP06 118 aa11.46□□□□□ -0.57
SSPN-201ENST00000242729 APOC4P55056 127 aa11.45□□□□□ -0.58
SSPN-201ENST00000242729 C6orf99Q4VX62 202 aa11.45□□□□□ -0.58
SSPN-201ENST00000242729 XAGE1AQ9HD64 81 aa11.45□□□□□ -0.58
SSPN-201ENST00000242729 LINC00846Q9NV44 126 aa11.45□□□□□ -0.58
SSPN-201ENST00000242729 TRBV7-7A0A0K0K1E9 115 aa11.45□□□□□ -0.58
SSPN-201ENST00000242729 ACYP1P07311 99 aa11.45□□□□□ -0.58
SSPN-201ENST00000242729 LINC00643Q86TS7 51 aa11.45□□□□□ -0.58
SSPN-201ENST00000242729 CXCL5P42830 114 aa11.45□□□□□ -0.58
SSPN-201ENST00000242729 OXLD1Q5BKU9 147 aa11.45□□□□□ -0.58
SSPN-201ENST00000242729 SPAG11BQ08648 103 aa11.44□□□□□ -0.58
SSPN-201ENST00000242729 MRPL23Q16540 153 aaKnown RBP11.44□□□□□ -0.58
SSPN-201ENST00000242729 A0A087WVE0 104 aa11.43□□□□□ -0.58
SSPN-201ENST00000242729 S100A7L2Q5SY68 101 aa11.43□□□□□ -0.58
SSPN-201ENST00000242729 ORMDL1Q9P0S3 153 aa11.43□□□□□ -0.58
SSPN-201ENST00000242729 CYSRT1A8MQ03 144 aa11.43□□□□□ -0.58
SSPN-201ENST00000242729 RPL18AQ02543 176 aaKnown RBP11.43□□□□□ -0.58
SSPN-201ENST00000242729 SPART-AS1P0CW21 52 aa11.42□□□□□ -0.58
SSPN-201ENST00000242729 HIGD2BQ4VC39 106 aa11.42□□□□□ -0.58
SSPN-201ENST00000242729 WFDC9Q8NEX5 89 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms