RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 DYNLRB2Q8TF09 96 aa6.71□□□□□ -1.34
HLA-DOA-201ENST00000229829 PDZD2O15018 2839 aa6.7□□□□□ -1.34
HLA-DOA-201ENST00000229829 A0A087WYN8 130 aa6.7□□□□□ -1.34
HLA-DOA-201ENST00000229829 S100A7L2Q5SY68 101 aa6.7□□□□□ -1.34
HLA-DOA-201ENST00000229829 BEAN1Q3B7T3 259 aa6.7□□□□□ -1.34
HLA-DOA-201ENST00000229829 Q5XG85 94 aa6.7□□□□□ -1.34
HLA-DOA-201ENST00000229829 MPLKIPQ8TAP9 179 aa6.7□□□□□ -1.34
HLA-DOA-201ENST00000229829 FLNAP21333 2647 aaKnown RBP6.7□□□□□ -1.34
HLA-DOA-201ENST00000229829 ODF3L2Q3SX64 289 aa6.69□□□□□ -1.34
HLA-DOA-201ENST00000229829 LINC01561Q8N1V8 128 aa6.69□□□□□ -1.34
HLA-DOA-201ENST00000229829 MTORP42345 2549 aa6.69□□□□□ -1.34
HLA-DOA-201ENST00000229829 ACANP16112 2415 aa6.69□□□□□ -1.34
HLA-DOA-201ENST00000229829 TRGV1A0A0A0MS02 117 aa6.69□□□□□ -1.34
HLA-DOA-201ENST00000229829 INSP01308 110 aa6.69□□□□□ -1.34
HLA-DOA-201ENST00000229829 HAMPP81172 84 aa6.69□□□□□ -1.34
HLA-DOA-201ENST00000229829 LINC00242Q5T6M2 205 aa6.69□□□□□ -1.34
HLA-DOA-201ENST00000229829 C1orf158Q8N1D5 194 aa6.69□□□□□ -1.34
HLA-DOA-201ENST00000229829 FASNP49327 2511 aaKnown RBP6.69□□□□□ -1.34
HLA-DOA-201ENST00000229829 WIPF1O43516 503 aa6.69□□□□□ -1.34
HLA-DOA-201ENST00000229829 NTM-AS1Q6ZSK4 140 aa6.68□□□□□ -1.34
HLA-DOA-201ENST00000229829 Q6ZTI0 123 aa6.68□□□□□ -1.34
HLA-DOA-201ENST00000229829 MIR7-3HGQ8N6C7 128 aa6.68□□□□□ -1.34
HLA-DOA-201ENST00000229829 C4orf3Q8WVX3 66 aa6.68□□□□□ -1.34
HLA-DOA-201ENST00000229829 SND1-IT1Q9HBX3 110 aa6.68□□□□□ -1.34
HLA-DOA-201ENST00000229829 IGLV5-45A0A087WSX0 123 aa6.67□□□□□ -1.34
HLA-DOA-201ENST00000229829 NDUFA1O15239 70 aa6.67□□□□□ -1.34
HLA-DOA-201ENST00000229829 RPL28P46779 137 aaKnown RBP6.67□□□□□ -1.34
HLA-DOA-201ENST00000229829 TENM4Q6N022 2769 aa6.66□□□□□ -1.34
HLA-DOA-201ENST00000229829 STHQ8IWL8 128 aa6.66□□□□□ -1.34
HLA-DOA-201ENST00000229829 NBEAL2Q6ZNJ1 2754 aa6.66□□□□□ -1.34
HLA-DOA-201ENST00000229829 IGLV5-39A0A0G2JS06 123 aa6.66□□□□□ -1.34
HLA-DOA-201ENST00000229829 COPS9Q8WXC6 57 aa6.66□□□□□ -1.34
HLA-DOA-201ENST00000229829 LINC01600Q96MT4 127 aa6.66□□□□□ -1.34
HLA-DOA-201ENST00000229829 PRO0628Q9UI54 55 aa6.66□□□□□ -1.34
HLA-DOA-201ENST00000229829 SMIM1B2RUZ4 78 aa6.65□□□□□ -1.34
HLA-DOA-201ENST00000229829 SMIM11BQ8TCY0 68 aa6.65□□□□□ -1.34
HLA-DOA-201ENST00000229829 Q96MF0 132 aa6.65□□□□□ -1.34
HLA-DOA-201ENST00000229829 Q6JHZ5 121 aa6.65□□□□□ -1.35
HLA-DOA-201ENST00000229829 TIMM17BO60830 172 aa6.64□□□□□ -1.35
HLA-DOA-201ENST00000229829 XCL1P47992 114 aa6.64□□□□□ -1.35
HLA-DOA-201ENST00000229829 WFDC10AQ9H1F0 79 aa6.64□□□□□ -1.35
HLA-DOA-201ENST00000229829 LINC00474Q9P2X8 69 aa6.64□□□□□ -1.35
HLA-DOA-201ENST00000229829 SCXQ7RTU7 201 aa6.64□□□□□ -1.35
HLA-DOA-201ENST00000229829 LINC00337Q8N6G1 96 aa6.64□□□□□ -1.35
HLA-DOA-201ENST00000229829 RMI2Q96E14 147 aa6.64□□□□□ -1.35
HLA-DOA-201ENST00000229829 NOP10Q9NPE3 64 aaKnown RBP6.64□□□□□ -1.35
HLA-DOA-201ENST00000229829 TRAV13-2A0A0B4J235 113 aa6.64□□□□□ -1.35
HLA-DOA-201ENST00000229829 LOC100131303A0A0U1RQF7 123 aa6.64□□□□□ -1.35
HLA-DOA-201ENST00000229829 UPK3BQ9BT76 320 aa6.64□□□□□ -1.35
HLA-DOA-201ENST00000229829 GCN1Q92616 2671 aaKnown RBP6.63□□□□□ -1.35
HLA-DOA-201ENST00000229829 K7EQD1 137 aa6.63□□□□□ -1.35
HLA-DOA-201ENST00000229829 IL17DQ8TAD2 202 aa6.63□□□□□ -1.35
HLA-DOA-201ENST00000229829 CDC42SE2Q9NRR3 84 aa6.63□□□□□ -1.35
HLA-DOA-201ENST00000229829 PRB2P02812 416 aaPredicted RBP6.63□□□□□ -1.35
HLA-DOA-201ENST00000229829 UBL5Q9BZL1 73 aa6.63□□□□□ -1.35
HLA-DOA-201ENST00000229829 DNAH6Q9C0G6 4158 aa6.62□□□□□ -1.35
HLA-DOA-201ENST00000229829 F8WEM9 126 aa6.62□□□□□ -1.35
HLA-DOA-201ENST00000229829 DEFB113Q30KQ7 82 aa6.62□□□□□ -1.35
HLA-DOA-201ENST00000229829 V9GYY9 64 aa6.62□□□□□ -1.35
HLA-DOA-201ENST00000229829 C22orf24Q9Y442 160 aa6.62□□□□□ -1.35
HLA-DOA-201ENST00000229829 UBE2L6O14933 153 aa6.62□□□□□ -1.35
HLA-DOA-201ENST00000229829 NDUFC2O95298 119 aa6.62□□□□□ -1.35
HLA-DOA-201ENST00000229829 GIG44P09565 113 aaPredicted RBP6.62□□□□□ -1.35
HLA-DOA-201ENST00000229829 C1orf195Q5TG92 126 aa6.62□□□□□ -1.35
HLA-DOA-201ENST00000229829 ORMDL1Q9P0S3 153 aa6.61□□□□□ -1.35
HLA-DOA-201ENST00000229829 CCL24O00175 119 aa6.61□□□□□ -1.35
HLA-DOA-201ENST00000229829 LAMTOR3Q9UHA4 124 aa6.61□□□□□ -1.35
HLA-DOA-201ENST00000229829 DAD1P61803 113 aa6.6□□□□□ -1.35
HLA-DOA-201ENST00000229829 SS18Q15532 418 aa6.6□□□□□ -1.35
HLA-DOA-201ENST00000229829 ESM1Q9NQ30 184 aa6.6□□□□□ -1.35
HLA-DOA-201ENST00000229829 FLNBO75369 2602 aaKnown RBP6.6□□□□□ -1.35
HLA-DOA-201ENST00000229829 ITPR2Q14571 2701 aa6.6□□□□□ -1.35
HLA-DOA-201ENST00000229829 FAM222AQ5U5X8 452 aa6.6□□□□□ -1.35
HLA-DOA-201ENST00000229829 DNAJC9-AS1A6NH13 148 aa6.6□□□□□ -1.35
HLA-DOA-201ENST00000229829 FAM19A3Q7Z5A8 133 aa6.6□□□□□ -1.35
HLA-DOA-201ENST00000229829 TRBV10-1A0A0K0K1A3 114 aa6.59□□□□□ -1.35
HLA-DOA-201ENST00000229829 PLAC8L1A1L4L8 177 aa6.59□□□□□ -1.35
HLA-DOA-201ENST00000229829 LRCOL1A6NCL2 159 aa6.59□□□□□ -1.35
HLA-DOA-201ENST00000229829 PRR3P79522 188 aaKnown RBP6.59□□□□□ -1.35
HLA-DOA-201ENST00000229829 TRGV2A0A075B6R0 118 aa6.59□□□□□ -1.36
HLA-DOA-201ENST00000229829 SERP1Q9Y6X1 66 aa6.58□□□□□ -1.36
HLA-DOA-201ENST00000229829 VWFP04275 2813 aa6.58□□□□□ -1.36
HLA-DOA-201ENST00000229829 IGLV4-60A0A075B6I1 120 aa6.58□□□□□ -1.36
HLA-DOA-201ENST00000229829 CCL18P55774 89 aa6.57□□□□□ -1.36
HLA-DOA-201ENST00000229829 OVOL2Q9BRP0 275 aa6.57□□□□□ -1.36
HLA-DOA-201ENST00000229829 CLPSL2Q6UWE3 100 aa6.57□□□□□ -1.36
HLA-DOA-201ENST00000229829 COX7B2Q8TF08 81 aa6.57□□□□□ -1.36
HLA-DOA-201ENST00000229829 H0YGX0 51 aa6.56□□□□□ -1.36
HLA-DOA-201ENST00000229829 C6orf226Q5I0X4 101 aa6.56□□□□□ -1.36
HLA-DOA-201ENST00000229829 IGKV2-28A0A075B6P5 120 aa6.56□□□□□ -1.36
HLA-DOA-201ENST00000229829 IGKV2D-28P01615 120 aa6.56□□□□□ -1.36
HLA-DOA-201ENST00000229829 TMEM86BQ8N661 226 aa6.56□□□□□ -1.36
HLA-DOA-201ENST00000229829 DYNC2H1Q8NCM8 4307 aaKnown RBP6.56□□□□□ -1.36
HLA-DOA-201ENST00000229829 SMIM26A0A096LP01 95 aa6.56□□□□□ -1.36
HLA-DOA-201ENST00000229829 TRAV10A0A0B4J240 114 aa6.55□□□□□ -1.36
HLA-DOA-201ENST00000229829 KRTAP1-1Q07627 177 aa6.55□□□□□ -1.36
HLA-DOA-201ENST00000229829 TRGV4A0A0C4DH28 118 aa6.55□□□□□ -1.36
HLA-DOA-201ENST00000229829 CCKP06307 115 aa6.55□□□□□ -1.36
HLA-DOA-201ENST00000229829 TRBV7-6A0A0J9YX20 115 aa6.55□□□□□ -1.36
HLA-DOA-201ENST00000229829 C19orf73Q9NVV2 129 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms