RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 C9orf129Q5T035 196 aaKnown RBP4.06□□□□□ -1.76
RFX4-201ENST00000229387 ATP11AUNQ6ZP68 121 aa4.06□□□□□ -1.76
RFX4-201ENST00000229387 LCA10Q71F78 164 aa4.06□□□□□ -1.76
RFX4-201ENST00000229387 CCL19Q99731 98 aa4.06□□□□□ -1.76
RFX4-201ENST00000229387 IGKV3-20P01619 116 aa4.05□□□□□ -1.76
RFX4-201ENST00000229387 IGLV1-40P01703 118 aa4.05□□□□□ -1.76
RFX4-201ENST00000229387 FUSP35637 526 aaKnown RBP eCLIP4.05□□□□□ -1.76
RFX4-201ENST00000229387 Q75L30 129 aa4.05□□□□□ -1.76
RFX4-201ENST00000229387 UBL5Q9BZL1 73 aa4.05□□□□□ -1.76
RFX4-201ENST00000229387 C11orf21Q9P2W6 132 aa4.05□□□□□ -1.76
RFX4-201ENST00000229387 JMJD7-PLA2G4BH0Y9G9 81 aa4.05□□□□□ -1.76
RFX4-201ENST00000229387 NPBQ8NG41 125 aa4.05□□□□□ -1.76
RFX4-201ENST00000229387 TMEM254Q8TBM7 123 aa4.05□□□□□ -1.76
RFX4-201ENST00000229387 LINC00308Q8TCZ7 52 aa4.05□□□□□ -1.76
RFX4-201ENST00000229387 A6NN06 94 aa4.05□□□□□ -1.76
RFX4-201ENST00000229387 H0YGX0 51 aa4.05□□□□□ -1.76
RFX4-201ENST00000229387 ANKRD17O75179 2603 aaKnown RBP4.05□□□□□ -1.76
RFX4-201ENST00000229387 SYCNQ0VAF6 134 aa4.05□□□□□ -1.76
RFX4-201ENST00000229387 WFDC9Q8NEX5 89 aa4.05□□□□□ -1.76
RFX4-201ENST00000229387 NF1P21359 2839 aa4.04□□□□□ -1.76
RFX4-201ENST00000229387 TEX15Q9BXT5 2789 aa4.04□□□□□ -1.76
RFX4-201ENST00000229387 TRBV6-5A0A0K0K1A5 114 aa4.04□□□□□ -1.76
RFX4-201ENST00000229387 NDUFA1O15239 70 aa4.04□□□□□ -1.76
RFX4-201ENST00000229387 RPL39P62891 51 aaKnown RBP4.04□□□□□ -1.76
RFX4-201ENST00000229387 DIRC1Q969H9 104 aa4.04□□□□□ -1.76
RFX4-201ENST00000229387 BBC3Q96PG8 261 aaPredicted RBP4.04□□□□□ -1.76
RFX4-201ENST00000229387 RNF5Q99942 180 aa4.04□□□□□ -1.76
RFX4-201ENST00000229387 ZNF469Q96JG9 3925 aaPredicted RBP4.04□□□□□ -1.76
RFX4-201ENST00000229387 TRAV10A0A0B4J240 114 aa4.04□□□□□ -1.76
RFX4-201ENST00000229387 CXCL6P80162 114 aa4.04□□□□□ -1.76
RFX4-201ENST00000229387 Q8N6K4 173 aa4.04□□□□□ -1.76
RFX4-201ENST00000229387 Q9HAA7 133 aa4.04□□□□□ -1.76
RFX4-201ENST00000229387 MXRA5Q9NR99 2828 aa4.04□□□□□ -1.76
RFX4-201ENST00000229387 NBPF19A0A087WUL8 3843 aa4.03□□□□□ -1.76
RFX4-201ENST00000229387 TRAV22A0A0B4J277 110 aa4.03□□□□□ -1.76
RFX4-201ENST00000229387 KRTAP10-9P60411 292 aa4.03□□□□□ -1.76
RFX4-201ENST00000229387 ODF3L2Q3SX64 289 aa4.03□□□□□ -1.76
RFX4-201ENST00000229387 C7orf65Q6ZTY9 151 aa4.03□□□□□ -1.76
RFX4-201ENST00000229387 IGHV3-64A0A075B6Q5 118 aa4.03□□□□□ -1.76
RFX4-201ENST00000229387 A0A0J9YXV3 536 aa4.03□□□□□ -1.76
RFX4-201ENST00000229387 ZNF580Q9UK33 172 aa4.03□□□□□ -1.76
RFX4-201ENST00000229387 A8MUN3 132 aa4.03□□□□□ -1.76
RFX4-201ENST00000229387 FAM74A4Q5TZK3 123 aa4.03□□□□□ -1.76
RFX4-201ENST00000229387 C5orf56Q8N8D9 126 aa4.03□□□□□ -1.76
RFX4-201ENST00000229387 IGHV4-59P01825 116 aa4.02□□□□□ -1.77
RFX4-201ENST00000229387 HTN1P15515 57 aa4.02□□□□□ -1.77
RFX4-201ENST00000229387 UBE2AP49459 152 aa4.02□□□□□ -1.77
RFX4-201ENST00000229387 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.02□□□□□ -1.77
RFX4-201ENST00000229387 NIPBLQ6KC79 2804 aaeCLIP4.02□□□□□ -1.77
RFX4-201ENST00000229387 CLPSL1A2RUU4 121 aa4.02□□□□□ -1.77
RFX4-201ENST00000229387 MINOS1Q5TGZ0 78 aa4.02□□□□□ -1.77
RFX4-201ENST00000229387 LINC00167Q96N53 147 aa4.02□□□□□ -1.77
RFX4-201ENST00000229387 KIF25-AS1Q9Y6Z4 181 aa4.02□□□□□ -1.77
RFX4-201ENST00000229387 MINOS1-NBL1R4GNA1 71 aa4.02□□□□□ -1.77
RFX4-201ENST00000229387 IGLV4-3A0A075B6K6 122 aa4.02□□□□□ -1.77
RFX4-201ENST00000229387 NCR3O14931 201 aa4.02□□□□□ -1.77
RFX4-201ENST00000229387 GNRH2O43555 120 aa4.02□□□□□ -1.77
RFX4-201ENST00000229387 LINC00315P59091 139 aa4.02□□□□□ -1.77
RFX4-201ENST00000229387 LINC00269Q8N2A0 174 aa4.02□□□□□ -1.77
RFX4-201ENST00000229387 KRTAP4-8Q9BYQ9 185 aa4.02□□□□□ -1.77
RFX4-201ENST00000229387 ORMDL1Q9P0S3 153 aa4.02□□□□□ -1.77
RFX4-201ENST00000229387 LENEPQ9Y5L5 61 aa4.02□□□□□ -1.77
RFX4-201ENST00000229387 MIR7-3HGQ8N6C7 128 aa4.01□□□□□ -1.77
RFX4-201ENST00000229387 JMJD1CQ15652 2540 aa4.01□□□□□ -1.77
RFX4-201ENST00000229387 PRM2P04554 102 aa4.01□□□□□ -1.77
RFX4-201ENST00000229387 NREPQ16612 68 aa4.01□□□□□ -1.77
RFX4-201ENST00000229387 PRR9Q5T870 116 aa4.01□□□□□ -1.77
RFX4-201ENST00000229387 MAP6D1Q9H9H5 199 aa4.01□□□□□ -1.77
RFX4-201ENST00000229387 LINC01547P58512 204 aaPredicted RBP4□□□□□ -1.77
RFX4-201ENST00000229387 DEFB136Q30KP8 78 aa4□□□□□ -1.77
RFX4-201ENST00000229387 C9orf47Q6ZRZ4 202 aa4□□□□□ -1.77
RFX4-201ENST00000229387 C20orf203Q8NBC4 194 aa4□□□□□ -1.77
RFX4-201ENST00000229387 HECTD1Q9ULT8 2610 aa4□□□□□ -1.77
RFX4-201ENST00000229387 A0A087WYN8 130 aa4□□□□□ -1.77
RFX4-201ENST00000229387 C16orf90A8MZG2 172 aa4□□□□□ -1.77
RFX4-201ENST00000229387 MSMBP08118 114 aa4□□□□□ -1.77
RFX4-201ENST00000229387 DEFB112Q30KQ8 113 aa4□□□□□ -1.77
RFX4-201ENST00000229387 CHD6Q8TD26 2715 aa4□□□□□ -1.77
RFX4-201ENST00000229387 TRAV21A0A0B4J279 112 aa4□□□□□ -1.77
RFX4-201ENST00000229387 XP32Q5T750 250 aa3.99□□□□□ -1.77
RFX4-201ENST00000229387 Q5VV11 94 aa3.99□□□□□ -1.77
RFX4-201ENST00000229387 C11orf72Q8NBR9 251 aa3.99□□□□□ -1.77
RFX4-201ENST00000229387 PSPHP1O15172 72 aa3.99□□□□□ -1.77
RFX4-201ENST00000229387 C18orf65Q6ZTR6 163 aa3.99□□□□□ -1.77
RFX4-201ENST00000229387 RHPN1-AS1Q9BWJ2 59 aa3.99□□□□□ -1.77
RFX4-201ENST00000229387 CYP4F30PQ9H0H9 118 aa3.99□□□□□ -1.77
RFX4-201ENST00000229387 ESM1Q9NQ30 184 aa3.99□□□□□ -1.77
RFX4-201ENST00000229387 FASNP49327 2511 aaKnown RBP3.99□□□□□ -1.77
RFX4-201ENST00000229387 IGLV5-45A0A087WSX0 123 aa3.99□□□□□ -1.77
RFX4-201ENST00000229387 IGKV2-29A2NJV5 120 aaPredicted RBP3.99□□□□□ -1.77
RFX4-201ENST00000229387 Q8N3U1 123 aa3.98□□□□□ -1.77
RFX4-201ENST00000229387 NKAPP1Q8N9T2 125 aa3.98□□□□□ -1.77
RFX4-201ENST00000229387 C1orf64Q8NEQ6 169 aa3.98□□□□□ -1.77
RFX4-201ENST00000229387 FLNAP21333 2647 aaKnown RBP3.98□□□□□ -1.77
RFX4-201ENST00000229387 LOC110117498A0A087WWA1 95 aa3.98□□□□□ -1.77
RFX4-201ENST00000229387 LOC100131303A0A0U1RQF7 123 aa3.98□□□□□ -1.77
RFX4-201ENST00000229387 SUMO4Q6EEV6 95 aa3.98□□□□□ -1.77
RFX4-201ENST00000229387 FAM104AQ969W3 186 aa3.98□□□□□ -1.77
RFX4-201ENST00000229387 PSCAO43653 123 aa3.97□□□□□ -1.77
RFX4-201ENST00000229387 IGHV3-73A0A0B4J1V6 119 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms