RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 TIMM17BO60830 172 aa10.83□□□□□ -0.68
TGFB1-201ENST00000221930 COX6CP09669 75 aa10.83□□□□□ -0.68
TGFB1-201ENST00000221930 LINC00308Q8TCZ7 52 aa10.83□□□□□ -0.68
TGFB1-201ENST00000221930 PLAC8L1A1L4L8 177 aa10.82□□□□□ -0.68
TGFB1-201ENST00000221930 UPK3BQ9BT76 320 aa10.82□□□□□ -0.68
TGFB1-201ENST00000221930 PRIMA1Q86XR5 153 aa10.82□□□□□ -0.68
TGFB1-201ENST00000221930 IGKV3OR2-268A0A0C4DH90 116 aa10.82□□□□□ -0.68
TGFB1-201ENST00000221930 LINC00336Q6ZUF6 198 aa10.82□□□□□ -0.68
TGFB1-201ENST00000221930 UBE2L6O14933 153 aa10.81□□□□□ -0.68
TGFB1-201ENST00000221930 PFN2P35080 140 aa10.81□□□□□ -0.68
TGFB1-201ENST00000221930 SOSTDC1Q6X4U4 206 aa10.81□□□□□ -0.68
TGFB1-201ENST00000221930 V9GYY9 64 aa10.8□□□□□ -0.68
TGFB1-201ENST00000221930 OTOGQ6ZRI0 2925 aa10.8□□□□□ -0.68
TGFB1-201ENST00000221930 LST1O00453 97 aa10.79□□□□□ -0.68
TGFB1-201ENST00000221930 SERP2Q8N6R1 65 aa10.79□□□□□ -0.68
TGFB1-201ENST00000221930 TMEM243Q9BU79 118 aa10.79□□□□□ -0.68
TGFB1-201ENST00000221930 C19orf73Q9NVV2 129 aa10.79□□□□□ -0.68
TGFB1-201ENST00000221930 RPL18AQ02543 176 aaKnown RBP10.78□□□□□ -0.68
TGFB1-201ENST00000221930 FAM19A3Q7Z5A8 133 aa10.78□□□□□ -0.68
TGFB1-201ENST00000221930 C16orf74Q96GX8 76 aa10.78□□□□□ -0.68
TGFB1-201ENST00000221930 TRGV4A0A0C4DH28 118 aa10.78□□□□□ -0.68
TGFB1-201ENST00000221930 IGLV1-51P01701 117 aa10.77□□□□□ -0.68
TGFB1-201ENST00000221930 CSNK1G2-AS1Q8NCQ2 148 aa10.77□□□□□ -0.69
TGFB1-201ENST00000221930 PKIGQ9Y2B9 76 aa10.77□□□□□ -0.69
TGFB1-201ENST00000221930 NDUFC2-KCTD14E9PQ53 114 aa10.75□□□□□ -0.69
TGFB1-201ENST00000221930 TOMM7Q9P0U1 55 aa10.75□□□□□ -0.69
TGFB1-201ENST00000221930 IGLV4-60A0A075B6I1 120 aa10.75□□□□□ -0.69
TGFB1-201ENST00000221930 TENM1Q9UKZ4 2725 aa10.74□□□□□ -0.69
TGFB1-201ENST00000221930 TRBV6-4A0A1B0GX49 114 aa10.74□□□□□ -0.69
TGFB1-201ENST00000221930 EPM2AB3EWF7 344 aa10.73□□□□□ -0.69
TGFB1-201ENST00000221930 DEFB130BP0DP73 79 aa10.73□□□□□ -0.69
TGFB1-201ENST00000221930 DEFB130AP0DP74 79 aa10.73□□□□□ -0.69
TGFB1-201ENST00000221930 FHL2Q14192 279 aa10.72□□□□□ -0.69
TGFB1-201ENST00000221930 SMR3AQ99954 134 aa10.72□□□□□ -0.69
TGFB1-201ENST00000221930 OVOL2Q9BRP0 275 aa10.72□□□□□ -0.69
TGFB1-201ENST00000221930 TRBV6-8A0A0A6YYG3 113 aa10.71□□□□□ -0.7
TGFB1-201ENST00000221930 TRRAPQ9Y4A5 3859 aa10.7□□□□□ -0.7
TGFB1-201ENST00000221930 COX7A2LO14548 114 aa10.7□□□□□ -0.7
TGFB1-201ENST00000221930 NDUFC2O95298 119 aa10.7□□□□□ -0.7
TGFB1-201ENST00000221930 COX7B2Q8TF08 81 aa10.7□□□□□ -0.7
TGFB1-201ENST00000221930 MIR7-3HGQ8N6C7 128 aa10.69□□□□□ -0.7
TGFB1-201ENST00000221930 COPS9Q8WXC6 57 aa10.69□□□□□ -0.7
TGFB1-201ENST00000221930 FAM236DA0A1B0GTK5 79 aa10.68□□□□□ -0.7
TGFB1-201ENST00000221930 LY6G6DO95868 133 aa10.68□□□□□ -0.7
TGFB1-201ENST00000221930 FAM236CP0DP71 79 aa10.68□□□□□ -0.7
TGFB1-201ENST00000221930 C1orf195Q5TG92 126 aa10.68□□□□□ -0.7
TGFB1-201ENST00000221930 TEP1Q99973 2627 aaKnown RBP10.67□□□□□ -0.7
TGFB1-201ENST00000221930 FAM218AQ96MZ4 157 aa10.67□□□□□ -0.7
TGFB1-201ENST00000221930 IGHV3OR16-9A0A0B4J2B5 98 aa10.67□□□□□ -0.7
TGFB1-201ENST00000221930 ATRQ13535 2644 aa10.67□□□□□ -0.7
TGFB1-201ENST00000221930 LINC00158P58513 81 aa10.66□□□□□ -0.7
TGFB1-201ENST00000221930 A0A096LPF7 62 aa10.66□□□□□ -0.7
TGFB1-201ENST00000221930 C11orf68Q9H3H3 251 aaKnown RBP10.66□□□□□ -0.7
TGFB1-201ENST00000221930 SERP1Q9Y6X1 66 aa10.66□□□□□ -0.7
TGFB1-201ENST00000221930 KRTAP10-3P60369 221 aa10.65□□□□□ -0.7
TGFB1-201ENST00000221930 LINC00337Q8N6G1 96 aa10.65□□□□□ -0.7
TGFB1-201ENST00000221930 SND1-IT1Q9HBX3 110 aa10.65□□□□□ -0.7
TGFB1-201ENST00000221930 IGKV2-28A0A075B6P5 120 aa10.65□□□□□ -0.71
TGFB1-201ENST00000221930 IGKV2D-28P01615 120 aa10.65□□□□□ -0.71
TGFB1-201ENST00000221930 HIVEP1P15822 2718 aa10.64□□□□□ -0.71
TGFB1-201ENST00000221930 GYPEP15421 78 aa10.64□□□□□ -0.71
TGFB1-201ENST00000221930 PF4P02776 101 aa10.64□□□□□ -0.71
TGFB1-201ENST00000221930 CLPSL2Q6UWE3 100 aa10.64□□□□□ -0.71
TGFB1-201ENST00000221930 Q9HAA7 133 aa10.63□□□□□ -0.71
TGFB1-201ENST00000221930 CRPP02741 224 aa10.63□□□□□ -0.71
TGFB1-201ENST00000221930 INAFM2P0DMQ5 153 aa10.63□□□□□ -0.71
TGFB1-201ENST00000221930 XCL1P47992 114 aa10.63□□□□□ -0.71
TGFB1-201ENST00000221930 USP17L23D6RBM5 183 aa10.62□□□□□ -0.71
TGFB1-201ENST00000221930 A0A087WZ39 114 aa10.62□□□□□ -0.71
TGFB1-201ENST00000221930 LINC00959A0A1B0GUT2 108 aa10.62□□□□□ -0.71
TGFB1-201ENST00000221930 BAALC-AS2P0C853 105 aa10.62□□□□□ -0.71
TGFB1-201ENST00000221930 SPATA3Q8NHX4 192 aa10.62□□□□□ -0.71
TGFB1-201ENST00000221930 CCL18P55774 89 aa10.61□□□□□ -0.71
TGFB1-201ENST00000221930 Q6JHZ5 121 aa10.61□□□□□ -0.71
TGFB1-201ENST00000221930 TRAV13-2A0A0B4J235 113 aa10.61□□□□□ -0.71
TGFB1-201ENST00000221930 DEFB4AO15263 64 aa10.6□□□□□ -0.71
TGFB1-201ENST00000221930 LINC00482Q8N8I6 264 aa10.6□□□□□ -0.71
TGFB1-201ENST00000221930 FAM222AQ5U5X8 452 aa10.6□□□□□ -0.71
TGFB1-201ENST00000221930 SMIM26A0A096LP01 95 aa10.59□□□□□ -0.71
TGFB1-201ENST00000221930 C6orf226Q5I0X4 101 aa10.59□□□□□ -0.71
TGFB1-201ENST00000221930 C22orf24Q9Y442 160 aa10.59□□□□□ -0.71
TGFB1-201ENST00000221930 RPL28P46779 137 aaKnown RBP10.59□□□□□ -0.71
TGFB1-201ENST00000221930 LINC01561Q8N1V8 128 aa10.59□□□□□ -0.71
TGFB1-201ENST00000221930 SMIM11BQ8TCY0 68 aa10.59□□□□□ -0.71
TGFB1-201ENST00000221930 X6R8D5 127 aa10.59□□□□□ -0.71
TGFB1-201ENST00000221930 IBA57-AS1B1ANH7 110 aa10.57□□□□□ -0.72
TGFB1-201ENST00000221930 PAX4O43316 350 aa10.57□□□□□ -0.72
TGFB1-201ENST00000221930 NSD1Q96L73 2696 aaPredicted RBP10.57□□□□□ -0.72
TGFB1-201ENST00000221930 A0A087WYN8 130 aa10.57□□□□□ -0.72
TGFB1-201ENST00000221930 Q8N3U1 123 aa10.56□□□□□ -0.72
TGFB1-201ENST00000221930 LINC00612Q8N6U2 182 aa10.56□□□□□ -0.72
TGFB1-201ENST00000221930 C9orf66Q5T8R8 295 aa10.55□□□□□ -0.72
TGFB1-201ENST00000221930 FP248Q71RG6 208 aaPredicted RBP10.55□□□□□ -0.72
TGFB1-201ENST00000221930 PRO0255Q9UI72 69 aa10.55□□□□□ -0.72
TGFB1-201ENST00000221930 DEFB135Q30KP9 77 aa10.54□□□□□ -0.72
TGFB1-201ENST00000221930 SS18Q15532 418 aa10.54□□□□□ -0.72
TGFB1-201ENST00000221930 A0A087WVE0 104 aa10.54□□□□□ -0.72
TGFB1-201ENST00000221930 IGKV3D-7A0A0C4DH55 119 aa10.54□□□□□ -0.72
TGFB1-201ENST00000221930 IGLV10-54A0A075B6I4 117 aa10.53□□□□□ -0.72
TGFB1-201ENST00000221930 INAFM1C9JVW0 142 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 1210.4 ms