RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 SMIM26A0A096LP01 95 aa12.66□□□□□ -0.38
EXTL3-201ENST00000220562 DEFB116Q30KQ4 102 aa12.65□□□□□ -0.38
EXTL3-201ENST00000220562 PLXNB1O43157 2135 aa12.64□□□□□ -0.39
EXTL3-201ENST00000220562 TRBV7-6A0A0J9YX20 115 aa12.64□□□□□ -0.39
EXTL3-201ENST00000220562 A0A1B0GUV1 79 aa12.63□□□□□ -0.39
EXTL3-201ENST00000220562 PCOTHQ58A44 107 aa12.63□□□□□ -0.39
EXTL3-201ENST00000220562 A8MTW9 85 aa12.63□□□□□ -0.39
EXTL3-201ENST00000220562 F8WDY8 70 aa12.63□□□□□ -0.39
EXTL3-201ENST00000220562 Q8N3U1 123 aa12.63□□□□□ -0.39
EXTL3-201ENST00000220562 C1orf195Q5TG92 126 aa12.63□□□□□ -0.39
EXTL3-201ENST00000220562 ADAMTS20P59510 1910 aa12.62□□□□□ -0.39
EXTL3-201ENST00000220562 C2orf48Q96LS8 159 aa12.62□□□□□ -0.39
EXTL3-201ENST00000220562 ARHGAP32A7KAX9 2087 aa12.61□□□□□ -0.39
EXTL3-201ENST00000220562 A0A087WSZ3 146 aa12.61□□□□□ -0.39
EXTL3-201ENST00000220562 ANKHD1Q8IWZ3 2542 aaKnown RBP12.6□□□□□ -0.39
EXTL3-201ENST00000220562 Q6ZRU5 148 aa12.6□□□□□ -0.39
EXTL3-201ENST00000220562 X6R8D5 127 aa12.59□□□□□ -0.39
EXTL3-201ENST00000220562 COL5A1P20908 1838 aaPredicted RBP12.59□□□□□ -0.39
EXTL3-201ENST00000220562 H0Y9P7 68 aa12.59□□□□□ -0.39
EXTL3-201ENST00000220562 EXPH5Q8NEV8 1989 aa12.59□□□□□ -0.39
EXTL3-201ENST00000220562 TRBV7-7A0A0K0K1E9 115 aa12.57□□□□□ -0.4
EXTL3-201ENST00000220562 C1orf134Q5TEV5 83 aa12.57□□□□□ -0.4
EXTL3-201ENST00000220562 LINC01561Q8N1V8 128 aa12.57□□□□□ -0.4
EXTL3-201ENST00000220562 OTOGLQ3ZCN5 2332 aa12.56□□□□□ -0.4
EXTL3-201ENST00000220562 PRLHP81277 87 aa12.56□□□□□ -0.4
EXTL3-201ENST00000220562 SBSPONQ8IVN8 264 aa12.55□□□□□ -0.4
EXTL3-201ENST00000220562 WNK1Q9H4A3 2382 aa12.55□□□□□ -0.4
EXTL3-201ENST00000220562 SPINK1P00995 79 aa12.55□□□□□ -0.4
EXTL3-201ENST00000220562 LINC00337Q8N6G1 96 aa12.54□□□□□ -0.4
EXTL3-201ENST00000220562 HCG22E2RYF7 251 aa12.53□□□□□ -0.4
EXTL3-201ENST00000220562 LINC00846Q9NV44 126 aa12.53□□□□□ -0.4
EXTL3-201ENST00000220562 PSPHP1O15172 72 aa12.52□□□□□ -0.41
EXTL3-201ENST00000220562 C22orf24Q9Y442 160 aa12.51□□□□□ -0.41
EXTL3-201ENST00000220562 KIF25-AS1Q9Y6Z4 181 aa12.5□□□□□ -0.41
EXTL3-201ENST00000220562 PMAIP1Q13794 54 aa12.5□□□□□ -0.41
EXTL3-201ENST00000220562 C11orf72Q8NBR9 251 aa12.5□□□□□ -0.41
EXTL3-201ENST00000220562 SMCR5Q8TEV8 140 aa12.49□□□□□ -0.41
EXTL3-201ENST00000220562 LINC01546A6NGU7 62 aa12.48□□□□□ -0.41
EXTL3-201ENST00000220562 FHL3Q13643 280 aa12.48□□□□□ -0.41
EXTL3-201ENST00000220562 CRYGAP11844 174 aa12.46□□□□□ -0.41
EXTL3-201ENST00000220562 TMEM254Q8TBM7 123 aa12.46□□□□□ -0.41
EXTL3-201ENST00000220562 KIAA0087Q14695 138 aa12.45□□□□□ -0.42
EXTL3-201ENST00000220562 SORL1Q92673 2214 aa12.45□□□□□ -0.42
EXTL3-201ENST00000220562 IGLV5-39A0A0G2JS06 123 aa12.44□□□□□ -0.42
EXTL3-201ENST00000220562 LIMD2Q9BT23 127 aa12.44□□□□□ -0.42
EXTL3-201ENST00000220562 PRRC2AP48634 2157 aaKnown RBP12.43□□□□□ -0.42
EXTL3-201ENST00000220562 CXCL6P80162 114 aa12.43□□□□□ -0.42
EXTL3-201ENST00000220562 Q8N2B8 174 aa12.43□□□□□ -0.42
EXTL3-201ENST00000220562 SPG11Q96JI7 2443 aa12.42□□□□□ -0.42
EXTL3-201ENST00000220562 FAM19A4Q96LR4 140 aa12.42□□□□□ -0.42
EXTL3-201ENST00000220562 CSPG4Q6UVK1 2322 aa12.42□□□□□ -0.42
EXTL3-201ENST00000220562 SMIM29Q86T20 159 aa12.42□□□□□ -0.42
EXTL3-201ENST00000220562 FSHBP01225 129 aa12.41□□□□□ -0.42
EXTL3-201ENST00000220562 C1orf64Q8NEQ6 169 aa12.4□□□□□ -0.42
EXTL3-201ENST00000220562 Q9UF83 564 aa12.4□□□□□ -0.42
EXTL3-201ENST00000220562 SPATA3Q8NHX4 192 aa12.39□□□□□ -0.43
EXTL3-201ENST00000220562 hDV103S1A0JD37 113 aa12.39□□□□□ -0.43
EXTL3-201ENST00000220562 CDIP1Q9H305 208 aa12.39□□□□□ -0.43
EXTL3-201ENST00000220562 AGRNO00468 2067 aa12.38□□□□□ -0.43
EXTL3-201ENST00000220562 NHLRC4P0CG21 123 aaPredicted RBP12.38□□□□□ -0.43
EXTL3-201ENST00000220562 MDFIQ99750 246 aa12.38□□□□□ -0.43
EXTL3-201ENST00000220562 LINC00315P59091 139 aa12.38□□□□□ -0.43
EXTL3-201ENST00000220562 CUL9Q8IWT3 2517 aa12.37□□□□□ -0.43
EXTL3-201ENST00000220562 C6orf48Q9UBA6 75 aa12.37□□□□□ -0.43
EXTL3-201ENST00000220562 BDP1A6H8Y1 2624 aa12.37□□□□□ -0.43
EXTL3-201ENST00000220562 IGHV3OR16-9A0A0B4J2B5 98 aa12.37□□□□□ -0.43
EXTL3-201ENST00000220562 IGKV2D-30A0A075B6S6 120 aa12.36□□□□□ -0.43
EXTL3-201ENST00000220562 IGKV2-30P06310 120 aa12.36□□□□□ -0.43
EXTL3-201ENST00000220562 LINC00167Q96N53 147 aa12.36□□□□□ -0.43
EXTL3-201ENST00000220562 C7orf65Q6ZTY9 151 aa12.35□□□□□ -0.43
EXTL3-201ENST00000220562 NAV3Q8IVL0 2385 aa12.35□□□□□ -0.43
EXTL3-201ENST00000220562 MOBPQ13875 183 aa12.32□□□□□ -0.44
EXTL3-201ENST00000220562 ACACBO00763 2458 aa12.32□□□□□ -0.44
EXTL3-201ENST00000220562 PTPN13Q12923 2485 aa12.32□□□□□ -0.44
EXTL3-201ENST00000220562 HIVEP3Q5T1R4 2406 aa12.32□□□□□ -0.44
EXTL3-201ENST00000220562 FAM218AQ96MZ4 157 aa12.32□□□□□ -0.44
EXTL3-201ENST00000220562 SPACA4Q8TDM5 124 aa12.3□□□□□ -0.44
EXTL3-201ENST00000220562 SMCPP49901 116 aaPredicted RBP12.28□□□□□ -0.44
EXTL3-201ENST00000220562 ELOF1P60002 83 aaKnown RBP12.28□□□□□ -0.44
EXTL3-201ENST00000220562 IGLV5-45A0A087WSX0 123 aa12.28□□□□□ -0.44
EXTL3-201ENST00000220562 PHF5AQ7RTV0 110 aaKnown RBP12.26□□□□□ -0.45
EXTL3-201ENST00000220562 COL4A2P08572 1712 aa12.26□□□□□ -0.45
EXTL3-201ENST00000220562 TET2Q6N021 2002 aaPredicted RBP12.25□□□□□ -0.45
EXTL3-201ENST00000220562 TTC28Q96AY4 2481 aa12.25□□□□□ -0.45
EXTL3-201ENST00000220562 PTPRBP23467 1997 aa12.24□□□□□ -0.45
EXTL3-201ENST00000220562 COL27A1Q8IZC6 1860 aaPredicted RBP12.23□□□□□ -0.45
EXTL3-201ENST00000220562 A0A1B0GU69 56 aa12.22□□□□□ -0.45
EXTL3-201ENST00000220562 TP53AIP1Q9HCN2 124 aa12.22□□□□□ -0.45
EXTL3-201ENST00000220562 Q6ZQT0 140 aa12.22□□□□□ -0.45
EXTL3-201ENST00000220562 CHTF8P0CG12 524 aa12.21□□□□□ -0.45
EXTL3-201ENST00000220562 H3BNG1 76 aa12.21□□□□□ -0.45
EXTL3-201ENST00000220562 LINC00476Q8WZB0 136 aa12.2□□□□□ -0.46
EXTL3-201ENST00000220562 ACYP2P14621 99 aa12.19□□□□□ -0.46
EXTL3-201ENST00000220562 NOTCH2Q04721 2471 aa12.19□□□□□ -0.46
EXTL3-201ENST00000220562 Q6ZRX8 168 aa12.19□□□□□ -0.46
EXTL3-201ENST00000220562 ST20-AS1Q8NBB2 130 aa12.18□□□□□ -0.46
EXTL3-201ENST00000220562 RTL8CO15255 209 aa12.18□□□□□ -0.46
EXTL3-201ENST00000220562 PRO0461Q9UI25 63 aa12.18□□□□□ -0.46
EXTL3-201ENST00000220562 SONP18583 2426 aaKnown RBP12.18□□□□□ -0.46
EXTL3-201ENST00000220562 EPM2AB3EWF7 344 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms