RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 BPTFQ12830 3046 aa3.18□□□□□ -1.9
CHD9-201ENST00000219084 KLK9Q2XQG4 91 aa3.18□□□□□ -1.9
CHD9-201ENST00000219084 SLPIP03973 132 aa3.18□□□□□ -1.9
CHD9-201ENST00000219084 REG3GQ6UW15 175 aa3.18□□□□□ -1.9
CHD9-201ENST00000219084 KPRPQ5T749 579 aaPredicted RBP3.18□□□□□ -1.9
CHD9-201ENST00000219084 WFDC10BQ8IUB3 73 aa3.18□□□□□ -1.9
CHD9-201ENST00000219084 TP53AIP1Q9HCN2 124 aa3.18□□□□□ -1.9
CHD9-201ENST00000219084 IGLV1-51P01701 117 aa3.18□□□□□ -1.9
CHD9-201ENST00000219084 FASNP49327 2511 aaKnown RBP3.17□□□□□ -1.9
CHD9-201ENST00000219084 LOC110117498A0A087WWA1 95 aa3.17□□□□□ -1.9
CHD9-201ENST00000219084 SBSPONQ8IVN8 264 aa3.17□□□□□ -1.9
CHD9-201ENST00000219084 HIGD2AQ9BW72 106 aa3.17□□□□□ -1.9
CHD9-201ENST00000219084 C3orf84H3BNL1 204 aa3.17□□□□□ -1.9
CHD9-201ENST00000219084 CYSRT1A8MQ03 144 aa3.17□□□□□ -1.9
CHD9-201ENST00000219084 ERC2-IT1O76042 136 aa3.17□□□□□ -1.9
CHD9-201ENST00000219084 LINC00575Q6W349 94 aa3.17□□□□□ -1.9
CHD9-201ENST00000219084 C22orf34Q6ZV56 151 aa3.17□□□□□ -1.9
CHD9-201ENST00000219084 SNURFQ9Y675 71 aa3.17□□□□□ -1.9
CHD9-201ENST00000219084 C1orf137Q5JT78 98 aa3.17□□□□□ -1.9
CHD9-201ENST00000219084 CDIP1Q9H305 208 aa3.17□□□□□ -1.9
CHD9-201ENST00000219084 FAM30AQ9NZY2 134 aa3.17□□□□□ -1.9
CHD9-201ENST00000219084 PRO0628Q9UI54 55 aa3.17□□□□□ -1.9
CHD9-201ENST00000219084 TSPEAR-AS2P59090 65 aa3.17□□□□□ -1.9
CHD9-201ENST00000219084 BBC3Q96PG8 261 aaPredicted RBP3.17□□□□□ -1.9
CHD9-201ENST00000219084 WFDC10AQ9H1F0 79 aa3.17□□□□□ -1.9
CHD9-201ENST00000219084 NUPR2A6NF83 97 aa3.16□□□□□ -1.9
CHD9-201ENST00000219084 FAM19A5Q7Z5A7 132 aaPredicted RBP3.16□□□□□ -1.9
CHD9-201ENST00000219084 PKD1L2Q7Z442 2459 aa3.16□□□□□ -1.9
CHD9-201ENST00000219084 A0A087WYN8 130 aa3.16□□□□□ -1.9
CHD9-201ENST00000219084 ADAMTSL4-AS1Q5T5F5 129 aa3.16□□□□□ -1.9
CHD9-201ENST00000219084 Q8N2B8 174 aa3.16□□□□□ -1.9
CHD9-201ENST00000219084 H3BNG1 76 aa3.16□□□□□ -1.9
CHD9-201ENST00000219084 ACANP16112 2415 aa3.16□□□□□ -1.9
CHD9-201ENST00000219084 PROK1P58294 105 aa3.16□□□□□ -1.9
CHD9-201ENST00000219084 CELA1Q9UNI1 258 aa3.16□□□□□ -1.9
CHD9-201ENST00000219084 FHL2Q14192 279 aa3.15□□□□□ -1.9
CHD9-201ENST00000219084 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.15□□□□□ -1.9
CHD9-201ENST00000219084 HCG22E2RYF7 251 aa3.15□□□□□ -1.9
CHD9-201ENST00000219084 Q8N3U1 123 aa3.15□□□□□ -1.9
CHD9-201ENST00000219084 KIF25-AS1Q9Y6Z4 181 aa3.15□□□□□ -1.9
CHD9-201ENST00000219084 GAS8-AS1O95177 125 aa3.15□□□□□ -1.9
CHD9-201ENST00000219084 LINC01547P58512 204 aaPredicted RBP3.15□□□□□ -1.9
CHD9-201ENST00000219084 LINC01006Q8NI28 216 aa3.15□□□□□ -1.9
CHD9-201ENST00000219084 TMEM254Q8TBM7 123 aa3.15□□□□□ -1.9
CHD9-201ENST00000219084 XAGE1AQ9HD64 81 aa3.15□□□□□ -1.9
CHD9-201ENST00000219084 CR1P17927 2039 aa3.15□□□□□ -1.9
CHD9-201ENST00000219084 A0A0U1RQV1 116 aa3.15□□□□□ -1.91
CHD9-201ENST00000219084 APCP25054 2843 aa3.15□□□□□ -1.91
CHD9-201ENST00000219084 DEFB4AO15263 64 aa3.15□□□□□ -1.91
CHD9-201ENST00000219084 COX6A2Q02221 97 aa3.15□□□□□ -1.91
CHD9-201ENST00000219084 IGF2RP11717 2491 aa3.15□□□□□ -1.91
CHD9-201ENST00000219084 HELZ2Q9BYK8 2649 aaKnown RBP3.15□□□□□ -1.91
CHD9-201ENST00000219084 ATRQ13535 2644 aa3.15□□□□□ -1.91
CHD9-201ENST00000219084 ESM1Q9NQ30 184 aa3.14□□□□□ -1.91
CHD9-201ENST00000219084 MTORP42345 2549 aa3.14□□□□□ -1.91
CHD9-201ENST00000219084 ODF3L2Q3SX64 289 aa3.14□□□□□ -1.91
CHD9-201ENST00000219084 EP400Q96L91 3159 aa3.14□□□□□ -1.91
CHD9-201ENST00000219084 IGKV2-28A0A075B6P5 120 aa3.14□□□□□ -1.91
CHD9-201ENST00000219084 IGKV2-24A0A0C4DH68 120 aa3.14□□□□□ -1.91
CHD9-201ENST00000219084 IGKV2D-28P01615 120 aa3.14□□□□□ -1.91
CHD9-201ENST00000219084 PRO0461Q9UI25 63 aa3.14□□□□□ -1.91
CHD9-201ENST00000219084 ESRGQ1W209 222 aa3.14□□□□□ -1.91
CHD9-201ENST00000219084 A8MZ25 164 aa3.14□□□□□ -1.91
CHD9-201ENST00000219084 SCXQ7RTU7 201 aa3.14□□□□□ -1.91
CHD9-201ENST00000219084 PLAC8L1A1L4L8 177 aa3.14□□□□□ -1.91
CHD9-201ENST00000219084 PMAIP1Q13794 54 aa3.13□□□□□ -1.91
CHD9-201ENST00000219084 LINC00482Q8N8I6 264 aa3.13□□□□□ -1.91
CHD9-201ENST00000219084 Q6ZVQ6 151 aa3.13□□□□□ -1.91
CHD9-201ENST00000219084 C11orf72Q8NBR9 251 aa3.13□□□□□ -1.91
CHD9-201ENST00000219084 FN1P02751 2386 aaKnown RBP3.13□□□□□ -1.91
CHD9-201ENST00000219084 ABCA12Q86UK0 2595 aa3.13□□□□□ -1.91
CHD9-201ENST00000219084 MAP1AP78559 2803 aaPredicted RBP3.13□□□□□ -1.91
CHD9-201ENST00000219084 ZNF843Q8N446 348 aa3.13□□□□□ -1.91
CHD9-201ENST00000219084 LINC00337Q8N6G1 96 aa3.12□□□□□ -1.91
CHD9-201ENST00000219084 NHLRC4P0CG21 123 aaPredicted RBP3.12□□□□□ -1.91
CHD9-201ENST00000219084 PRB1P04280 392 aa3.12□□□□□ -1.91
CHD9-201ENST00000219084 H0Y9P7 68 aa3.12□□□□□ -1.91
CHD9-201ENST00000219084 ASB16-AS1Q495Z4 193 aa3.12□□□□□ -1.91
CHD9-201ENST00000219084 LOC100131303A0A0U1RQF7 123 aa3.12□□□□□ -1.91
CHD9-201ENST00000219084 WFDC11Q8NEX6 87 aa3.12□□□□□ -1.91
CHD9-201ENST00000219084 GVQW2A0A096LPI5 108 aaPredicted RBP3.12□□□□□ -1.91
CHD9-201ENST00000219084 FHL3Q13643 280 aa3.12□□□□□ -1.91
CHD9-201ENST00000219084 UNQ6190/PRO20217Q6UXQ8 127 aa3.12□□□□□ -1.91
CHD9-201ENST00000219084 WFDC13Q8IUB5 93 aa3.12□□□□□ -1.91
CHD9-201ENST00000219084 LINC00846Q9NV44 126 aa3.12□□□□□ -1.91
CHD9-201ENST00000219084 IGHV3OR16-9A0A0B4J2B5 98 aa3.11□□□□□ -1.91
CHD9-201ENST00000219084 HRCT1Q6UXD1 115 aa3.11□□□□□ -1.91
CHD9-201ENST00000219084 ELOF1P60002 83 aaKnown RBP3.11□□□□□ -1.91
CHD9-201ENST00000219084 Q9BRP9 147 aa3.11□□□□□ -1.91
CHD9-201ENST00000219084 LINC00315P59091 139 aa3.11□□□□□ -1.91
CHD9-201ENST00000219084 LINC00208Q96KT6 92 aa3.11□□□□□ -1.91
CHD9-201ENST00000219084 LINC01556Q5JQF7 62 aa3.1□□□□□ -1.91
CHD9-201ENST00000219084 C10orf99Q6UWK7 81 aa3.1□□□□□ -1.91
CHD9-201ENST00000219084 IGLV4-60A0A075B6I1 120 aa3.1□□□□□ -1.91
CHD9-201ENST00000219084 CFAP46Q8IYW2 2715 aa3.1□□□□□ -1.91
CHD9-201ENST00000219084 IGHV4-30-4P0DP06 118 aa3.1□□□□□ -1.91
CHD9-201ENST00000219084 Q6ZQT0 140 aa3.1□□□□□ -1.91
CHD9-201ENST00000219084 LY6G6DO95868 133 aa3.1□□□□□ -1.91
CHD9-201ENST00000219084 A0A0J9YWU9 116 aa3.1□□□□□ -1.91
CHD9-201ENST00000219084 PRB2P02812 416 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms