RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CUBNO60494 3623 aa9.23□□□□□ -0.93
SRP54-201ENST00000216774 FAM236AA0A1B0GUQ0 79 aa9.22□□□□□ -0.93
SRP54-201ENST00000216774 FAM236BA0A1B0GV22 79 aa9.22□□□□□ -0.93
SRP54-201ENST00000216774 SMIM9A6NGZ8 99 aa9.22□□□□□ -0.93
SRP54-201ENST00000216774 XCL1P47992 114 aa9.22□□□□□ -0.93
SRP54-201ENST00000216774 PRO0255Q9UI72 69 aa9.22□□□□□ -0.93
SRP54-201ENST00000216774 CCDC168Q8NDH2 2452 aa9.22□□□□□ -0.93
SRP54-201ENST00000216774 NBPF19A0A087WUL8 3843 aa9.22□□□□□ -0.93
SRP54-201ENST00000216774 ATP5G1P05496 136 aa9.21□□□□□ -0.93
SRP54-201ENST00000216774 X6R8D5 127 aa9.21□□□□□ -0.93
SRP54-201ENST00000216774 SETD2Q9BYW2 2564 aaPredicted RBP9.21□□□□□ -0.93
SRP54-201ENST00000216774 OR13C6PQ8NH95 151 aa9.21□□□□□ -0.94
SRP54-201ENST00000216774 LECT2O14960 151 aa9.2□□□□□ -0.94
SRP54-201ENST00000216774 C11orf68Q9H3H3 251 aaKnown RBP9.2□□□□□ -0.94
SRP54-201ENST00000216774 LINC00482Q8N8I6 264 aa9.19□□□□□ -0.94
SRP54-201ENST00000216774 PDZD2O15018 2839 aa9.19□□□□□ -0.94
SRP54-201ENST00000216774 KLK5Q9Y337 293 aaPredicted RBP9.19□□□□□ -0.94
SRP54-201ENST00000216774 LYRM9A8MSI8 78 aa9.18□□□□□ -0.94
SRP54-201ENST00000216774 COX17Q14061 63 aa9.18□□□□□ -0.94
SRP54-201ENST00000216774 C14orf132Q9NPU4 83 aa9.18□□□□□ -0.94
SRP54-201ENST00000216774 C9orf129Q5T035 196 aaKnown RBP9.17□□□□□ -0.94
SRP54-201ENST00000216774 CD164L2Q6UWJ8 174 aa9.17□□□□□ -0.94
SRP54-201ENST00000216774 A0A1B0GX51 115 aa9.17□□□□□ -0.94
SRP54-201ENST00000216774 NDUFC2O95298 119 aa9.17□□□□□ -0.94
SRP54-201ENST00000216774 ORMDL1Q9P0S3 153 aa9.17□□□□□ -0.94
SRP54-201ENST00000216774 CLPSL2Q6UWE3 100 aa9.16□□□□□ -0.94
SRP54-201ENST00000216774 KRTAP10-3P60369 221 aa9.16□□□□□ -0.94
SRP54-201ENST00000216774 KIAA0087Q14695 138 aa9.16□□□□□ -0.94
SRP54-201ENST00000216774 LINC00167Q96N53 147 aa9.16□□□□□ -0.94
SRP54-201ENST00000216774 TENM4Q6N022 2769 aa9.16□□□□□ -0.94
SRP54-201ENST00000216774 ANK3Q12955 4377 aaKnown RBP9.16□□□□□ -0.94
SRP54-201ENST00000216774 CFAP161Q6P656 301 aa9.15□□□□□ -0.94
SRP54-201ENST00000216774 LINC00269Q8N2A0 174 aa9.15□□□□□ -0.94
SRP54-201ENST00000216774 IGHV4-28A0A0C4DH34 117 aa9.15□□□□□ -0.95
SRP54-201ENST00000216774 TMEM126AQ9H061 195 aa9.15□□□□□ -0.95
SRP54-201ENST00000216774 A0A096LPF7 62 aa9.14□□□□□ -0.95
SRP54-201ENST00000216774 NANOS2P60321 138 aaKnown RBP9.14□□□□□ -0.95
SRP54-201ENST00000216774 HIST1H4AP62805 103 aaKnown RBP9.14□□□□□ -0.95
SRP54-201ENST00000216774 CHCHD10Q8WYQ3 142 aaPredicted RBP9.14□□□□□ -0.95
SRP54-201ENST00000216774 NCR3O14931 201 aa9.13□□□□□ -0.95
SRP54-201ENST00000216774 SLPIP03973 132 aa9.13□□□□□ -0.95
SRP54-201ENST00000216774 Q6JHZ5 121 aa9.13□□□□□ -0.95
SRP54-201ENST00000216774 C3orf22Q8N5N4 141 aa9.13□□□□□ -0.95
SRP54-201ENST00000216774 MTORP42345 2549 aa9.13□□□□□ -0.95
SRP54-201ENST00000216774 UQCRQO14949 82 aa9.12□□□□□ -0.95
SRP54-201ENST00000216774 BAHCC1Q9P281 2608 aa9.12□□□□□ -0.95
SRP54-201ENST00000216774 REG3AQ06141 175 aa9.12□□□□□ -0.95
SRP54-201ENST00000216774 Q8N814 137 aa9.12□□□□□ -0.95
SRP54-201ENST00000216774 LINC00846Q9NV44 126 aa9.12□□□□□ -0.95
SRP54-201ENST00000216774 ACANP16112 2415 aa9.12□□□□□ -0.95
SRP54-201ENST00000216774 ANGP03950 147 aaKnown RBP9.11□□□□□ -0.95
SRP54-201ENST00000216774 SVIPQ8NHG7 77 aa9.11□□□□□ -0.95
SRP54-201ENST00000216774 JMJD7-PLA2G4BH0Y9G9 81 aa9.11□□□□□ -0.95
SRP54-201ENST00000216774 C9orf66Q5T8R8 295 aa9.11□□□□□ -0.95
SRP54-201ENST00000216774 CCKP06307 115 aa9.1□□□□□ -0.95
SRP54-201ENST00000216774 PRR3P79522 188 aaKnown RBP9.1□□□□□ -0.95
SRP54-201ENST00000216774 MUC7Q8TAX7 377 aa9.1□□□□□ -0.95
SRP54-201ENST00000216774 LINC00526Q96FQ7 95 aa9.1□□□□□ -0.95
SRP54-201ENST00000216774 TMEM256-PLSCR3K7ERE1 68 aa9.1□□□□□ -0.95
SRP54-201ENST00000216774 ATOX1O00244 68 aa9.1□□□□□ -0.95
SRP54-201ENST00000216774 APOC4P55056 127 aa9.09□□□□□ -0.95
SRP54-201ENST00000216774 C9orf153Q5TBE3 101 aa9.09□□□□□ -0.95
SRP54-201ENST00000216774 GCN1Q92616 2671 aaKnown RBP9.09□□□□□ -0.95
SRP54-201ENST00000216774 IGLV10-54A0A075B6I4 117 aa9.08□□□□□ -0.96
SRP54-201ENST00000216774 DAD1P61803 113 aa9.08□□□□□ -0.96
SRP54-201ENST00000216774 DEFB135Q30KP9 77 aa9.08□□□□□ -0.96
SRP54-201ENST00000216774 COX7CP15954 63 aa9.07□□□□□ -0.96
SRP54-201ENST00000216774 Q8N3U1 123 aa9.07□□□□□ -0.96
SRP54-201ENST00000216774 RPL18AQ02543 176 aaKnown RBP9.07□□□□□ -0.96
SRP54-201ENST00000216774 DEFB4AO15263 64 aa9.06□□□□□ -0.96
SRP54-201ENST00000216774 C9orf116Q5BN46 136 aaPredicted RBP9.06□□□□□ -0.96
SRP54-201ENST00000216774 S100A7L2Q5SY68 101 aa9.06□□□□□ -0.96
SRP54-201ENST00000216774 ITPR2Q14571 2701 aa9.06□□□□□ -0.96
SRP54-201ENST00000216774 FN1P02751 2386 aaKnown RBP9.06□□□□□ -0.96
SRP54-201ENST00000216774 IGKV3D-7A0A0C4DH55 119 aa9.06□□□□□ -0.96
SRP54-201ENST00000216774 C2orf48Q96LS8 159 aa9.06□□□□□ -0.96
SRP54-201ENST00000216774 NBEAL2Q6ZNJ1 2754 aa9.05□□□□□ -0.96
SRP54-201ENST00000216774 MIFP14174 115 aa9.05□□□□□ -0.96
SRP54-201ENST00000216774 C6orf99Q4VX62 202 aa9.05□□□□□ -0.96
SRP54-201ENST00000216774 LELP1Q5T871 98 aa9.05□□□□□ -0.96
SRP54-201ENST00000216774 SMIM20Q8N5G0 67 aa9.05□□□□□ -0.96
SRP54-201ENST00000216774 Q8NAQ8 132 aa9.05□□□□□ -0.96
SRP54-201ENST00000216774 SMR3AQ99954 134 aa9.05□□□□□ -0.96
SRP54-201ENST00000216774 A0A0J9YWU9 116 aa9.04□□□□□ -0.96
SRP54-201ENST00000216774 IGHV4-30-4P0DP06 118 aa9.04□□□□□ -0.96
SRP54-201ENST00000216774 SPAG11BQ08648 103 aa9.04□□□□□ -0.96
SRP54-201ENST00000216774 ATP5EP2Q5VTU8 51 aa9.04□□□□□ -0.96
SRP54-201ENST00000216774 Q8NDZ9 215 aa9.04□□□□□ -0.96
SRP54-201ENST00000216774 LINC00575Q6W349 94 aa9.03□□□□□ -0.96
SRP54-201ENST00000216774 C3orf56Q8N813 242 aa9.03□□□□□ -0.96
SRP54-201ENST00000216774 SPATA3Q8NHX4 192 aa9.03□□□□□ -0.96
SRP54-201ENST00000216774 CRYGAP11844 174 aa9.03□□□□□ -0.96
SRP54-201ENST00000216774 PRR34Q9NV39 138 aa9.03□□□□□ -0.96
SRP54-201ENST00000216774 CELA1Q9UNI1 258 aa9.03□□□□□ -0.96
SRP54-201ENST00000216774 SPART-AS1P0CW21 52 aa9.02□□□□□ -0.96
SRP54-201ENST00000216774 HIVEP2P31629 2446 aa9.02□□□□□ -0.97
SRP54-201ENST00000216774 J3QKU1 62 aa9.02□□□□□ -0.97
SRP54-201ENST00000216774 C10orf25Q5T742 122 aa9.02□□□□□ -0.97
SRP54-201ENST00000216774 UNQ6190/PRO20217Q6UXQ8 127 aa9.02□□□□□ -0.97
SRP54-201ENST00000216774 UNC79Q9P2D8 2635 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms