RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 CHCHD7Q9BUK0 85 aa9.77□□□□□ -0.85
SIX4-201ENST00000216513 LAMA3Q16787 3333 aa9.76□□□□□ -0.85
SIX4-201ENST00000216513 UNQ6190/PRO20217Q6UXQ8 127 aa9.76□□□□□ -0.85
SIX4-201ENST00000216513 SPANXB1Q9NS25 103 aaPredicted RBP9.76□□□□□ -0.85
SIX4-201ENST00000216513 TRBV27A0A0K0K1C4 114 aa9.76□□□□□ -0.85
SIX4-201ENST00000216513 IGLV4-60A0A075B6I1 120 aa9.75□□□□□ -0.85
SIX4-201ENST00000216513 K7EIL1 84 aa9.75□□□□□ -0.85
SIX4-201ENST00000216513 LINC00694P0DN24 101 aa9.74□□□□□ -0.85
SIX4-201ENST00000216513 SNURFQ9Y675 71 aa9.74□□□□□ -0.85
SIX4-201ENST00000216513 TRBV6-5A0A0K0K1A5 114 aa9.74□□□□□ -0.85
SIX4-201ENST00000216513 Q6ZSN1 163 aa9.74□□□□□ -0.85
SIX4-201ENST00000216513 NDUFV3P56181 108 aaKnown RBP9.74□□□□□ -0.85
SIX4-201ENST00000216513 CDC42SE2Q9NRR3 84 aa9.74□□□□□ -0.85
SIX4-201ENST00000216513 ESRGQ1W209 222 aa9.73□□□□□ -0.85
SIX4-201ENST00000216513 WFDC13Q8IUB5 93 aa9.73□□□□□ -0.85
SIX4-201ENST00000216513 MRPS12O15235 138 aaKnown RBP9.73□□□□□ -0.85
SIX4-201ENST00000216513 CCKP06307 115 aa9.73□□□□□ -0.85
SIX4-201ENST00000216513 J3KT08 172 aa9.72□□□□□ -0.85
SIX4-201ENST00000216513 YPEL4Q96NS1 127 aa9.72□□□□□ -0.85
SIX4-201ENST00000216513 C3orf22Q8N5N4 141 aa9.72□□□□□ -0.85
SIX4-201ENST00000216513 KRTAP10-11P60412 298 aa9.72□□□□□ -0.85
SIX4-201ENST00000216513 LINC00643Q86TS7 51 aa9.72□□□□□ -0.85
SIX4-201ENST00000216513 A8MTW9 85 aa9.71□□□□□ -0.85
SIX4-201ENST00000216513 NDUFC2O95298 119 aa9.7□□□□□ -0.86
SIX4-201ENST00000216513 DEFB116Q30KQ4 102 aa9.7□□□□□ -0.86
SIX4-201ENST00000216513 SMIM11BQ8TCY0 68 aa9.7□□□□□ -0.86
SIX4-201ENST00000216513 C2orf91Q6ZV80 131 aa9.7□□□□□ -0.86
SIX4-201ENST00000216513 PYGO1Q9Y3Y4 419 aa9.7□□□□□ -0.86
SIX4-201ENST00000216513 LINC00315P59091 139 aa9.7□□□□□ -0.86
SIX4-201ENST00000216513 REG3GQ6UW15 175 aa9.69□□□□□ -0.86
SIX4-201ENST00000216513 Q6ZQY7 126 aa9.69□□□□□ -0.86
SIX4-201ENST00000216513 NBDYA0A0U1RRE5 68 aa9.69□□□□□ -0.86
SIX4-201ENST00000216513 DHRS4-AS1Q9P1J3 65 aa9.69□□□□□ -0.86
SIX4-201ENST00000216513 PDE6GP18545 87 aa9.69□□□□□ -0.86
SIX4-201ENST00000216513 PCSK5Q92824 1860 aa9.69□□□□□ -0.86
SIX4-201ENST00000216513 FAM30AQ9NZY2 134 aa9.68□□□□□ -0.86
SIX4-201ENST00000216513 EGFEM1PQ0D2K5 195 aa9.68□□□□□ -0.86
SIX4-201ENST00000216513 TRBV30A0A0K0K1B3 111 aa9.67□□□□□ -0.86
SIX4-201ENST00000216513 Q8IZM0 81 aa9.67□□□□□ -0.86
SIX4-201ENST00000216513 URB1-AS1Q96HZ7 61 aa9.67□□□□□ -0.86
SIX4-201ENST00000216513 LINC00337Q8N6G1 96 aa9.67□□□□□ -0.86
SIX4-201ENST00000216513 TSPEAR-AS2P59090 65 aa9.67□□□□□ -0.86
SIX4-201ENST00000216513 MRPS36P82909 103 aaKnown RBP9.67□□□□□ -0.86
SIX4-201ENST00000216513 COL27A1Q8IZC6 1860 aaPredicted RBP9.67□□□□□ -0.86
SIX4-201ENST00000216513 LINC00310P59036 64 aa9.66□□□□□ -0.86
SIX4-201ENST00000216513 A0A0U1RQV1 116 aa9.66□□□□□ -0.86
SIX4-201ENST00000216513 RTL8CO15255 209 aa9.66□□□□□ -0.86
SIX4-201ENST00000216513 POLR2KP53803 58 aaKnown RBP9.65□□□□□ -0.86
SIX4-201ENST00000216513 UNC80Q8N2C7 3258 aa9.65□□□□□ -0.86
SIX4-201ENST00000216513 AGRNO00468 2067 aa9.65□□□□□ -0.86
SIX4-201ENST00000216513 C10orf25Q5T742 122 aa9.65□□□□□ -0.86
SIX4-201ENST00000216513 KRTAP10-3P60369 221 aa9.64□□□□□ -0.87
SIX4-201ENST00000216513 FAM236DA0A1B0GTK5 79 aa9.64□□□□□ -0.87
SIX4-201ENST00000216513 FAM236CP0DP71 79 aa9.64□□□□□ -0.87
SIX4-201ENST00000216513 X6R8D5 127 aa9.64□□□□□ -0.87
SIX4-201ENST00000216513 ZNF73O43830 326 aaPredicted RBP9.63□□□□□ -0.87
SIX4-201ENST00000216513 COX17Q14061 63 aa9.62□□□□□ -0.87
SIX4-201ENST00000216513 ADAMTSL4-AS1Q5T5F5 129 aa9.61□□□□□ -0.87
SIX4-201ENST00000216513 A0A087WYN8 130 aa9.61□□□□□ -0.87
SIX4-201ENST00000216513 MRPL55Q7Z7F7 128 aaKnown RBP9.61□□□□□ -0.87
SIX4-201ENST00000216513 PLA2G1BP04054 148 aaKnown RBP9.61□□□□□ -0.87
SIX4-201ENST00000216513 LINC00242Q5T6M2 205 aa9.61□□□□□ -0.87
SIX4-201ENST00000216513 LINC00588Q9Y4M8 146 aa9.61□□□□□ -0.87
SIX4-201ENST00000216513 CDH23Q9H251 3354 aa9.6□□□□□ -0.87
SIX4-201ENST00000216513 Q6ZRU5 148 aa9.6□□□□□ -0.87
SIX4-201ENST00000216513 KRTAP1-3Q8IUG1 177 aa9.6□□□□□ -0.87
SIX4-201ENST00000216513 A0A096LNT2 108 aa9.6□□□□□ -0.87
SIX4-201ENST00000216513 Q8N3U1 123 aa9.59□□□□□ -0.87
SIX4-201ENST00000216513 C2orf48Q96LS8 159 aa9.59□□□□□ -0.87
SIX4-201ENST00000216513 NDUFC2-KCTD14E9PQ53 114 aa9.59□□□□□ -0.87
SIX4-201ENST00000216513 MUC4Q99102 2169 aa9.59□□□□□ -0.87
SIX4-201ENST00000216513 Q8NAQ8 132 aa9.58□□□□□ -0.88
SIX4-201ENST00000216513 A0A087WVE0 104 aa9.58□□□□□ -0.88
SIX4-201ENST00000216513 CCDC179H3BU77 68 aa9.57□□□□□ -0.88
SIX4-201ENST00000216513 PRLHP81277 87 aa9.57□□□□□ -0.88
SIX4-201ENST00000216513 TRBV10-3A0A0K0K1G6 114 aa9.57□□□□□ -0.88
SIX4-201ENST00000216513 Q9UF83 564 aa9.57□□□□□ -0.88
SIX4-201ENST00000216513 C11orf72Q8NBR9 251 aa9.56□□□□□ -0.88
SIX4-201ENST00000216513 IGIPA6NJ69 53 aa9.56□□□□□ -0.88
SIX4-201ENST00000216513 PRUNE2Q8WUY3 3088 aa9.56□□□□□ -0.88
SIX4-201ENST00000216513 A0A1B0GUV1 79 aa9.55□□□□□ -0.88
SIX4-201ENST00000216513 RANBP2P49792 3224 aaKnown RBP9.55□□□□□ -0.88
SIX4-201ENST00000216513 UQCRQO14949 82 aa9.55□□□□□ -0.88
SIX4-201ENST00000216513 HELZ2Q9BYK8 2649 aaKnown RBP9.55□□□□□ -0.88
SIX4-201ENST00000216513 DNAH14Q0VDD8 3507 aa9.54□□□□□ -0.88
SIX4-201ENST00000216513 LAMA2P24043 3122 aaKnown RBP9.53□□□□□ -0.88
SIX4-201ENST00000216513 SZT2Q5T011 3432 aa9.53□□□□□ -0.88
SIX4-201ENST00000216513 SMIM1B2RUZ4 78 aa9.52□□□□□ -0.88
SIX4-201ENST00000216513 KRTAP1-1Q07627 177 aa9.52□□□□□ -0.88
SIX4-201ENST00000216513 Q6Q795 121 aa9.52□□□□□ -0.88
SIX4-201ENST00000216513 PRRC2CQ9Y520 2896 aaKnown RBP9.52□□□□□ -0.89
SIX4-201ENST00000216513 CHTF8P0CG12 524 aa9.52□□□□□ -0.89
SIX4-201ENST00000216513 Q9BRP9 147 aa9.52□□□□□ -0.89
SIX4-201ENST00000216513 RPL37AP61513 92 aaKnown RBP9.52□□□□□ -0.89
SIX4-201ENST00000216513 LST1O00453 97 aa9.51□□□□□ -0.89
SIX4-201ENST00000216513 SMR3BP02814 79 aaPredicted RBP9.51□□□□□ -0.89
SIX4-201ENST00000216513 C22orf24Q9Y442 160 aa9.51□□□□□ -0.89
SIX4-201ENST00000216513 FAM19A3Q7Z5A8 133 aa9.51□□□□□ -0.89
SIX4-201ENST00000216513 K7ERS5 55 aa9.51□□□□□ -0.89
SIX4-201ENST00000216513 H3BNG1 76 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms