RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 PLAC8L1A1L4L8 177 aa13.44□□□□□ -0.26
MBD3-201ENST00000156825 TRBV10-3A0A0K0K1G6 114 aa13.44□□□□□ -0.26
MBD3-201ENST00000156825 SNURFQ9Y675 71 aa13.43□□□□□ -0.26
MBD3-201ENST00000156825 COL5A1P20908 1838 aaPredicted RBP13.43□□□□□ -0.26
MBD3-201ENST00000156825 CASC2Q6XLA1 102 aa13.43□□□□□ -0.26
MBD3-201ENST00000156825 DHRS4-AS1Q9P1J3 65 aa13.42□□□□□ -0.26
MBD3-201ENST00000156825 UQCRQO14949 82 aa13.41□□□□□ -0.26
MBD3-201ENST00000156825 COX17Q14061 63 aa13.41□□□□□ -0.26
MBD3-201ENST00000156825 XGP55808 180 aa13.4□□□□□ -0.26
MBD3-201ENST00000156825 M0QXV9 152 aa13.4□□□□□ -0.26
MBD3-201ENST00000156825 ATRQ13535 2644 aa13.39□□□□□ -0.27
MBD3-201ENST00000156825 C16orf95Q9H693 158 aa13.39□□□□□ -0.27
MBD3-201ENST00000156825 ATP5EP2Q5VTU8 51 aa13.38□□□□□ -0.27
MBD3-201ENST00000156825 BRK1Q8WUW1 75 aa13.38□□□□□ -0.27
MBD3-201ENST00000156825 COX8CQ7Z4L0 72 aa13.38□□□□□ -0.27
MBD3-201ENST00000156825 C3orf22Q8N5N4 141 aa13.37□□□□□ -0.27
MBD3-201ENST00000156825 EGFEM1PQ0D2K5 195 aa13.37□□□□□ -0.27
MBD3-201ENST00000156825 AMELXQ99217 191 aa13.37□□□□□ -0.27
MBD3-201ENST00000156825 A8MTW9 85 aa13.36□□□□□ -0.27
MBD3-201ENST00000156825 BEAN1Q3B7T3 259 aa13.36□□□□□ -0.27
MBD3-201ENST00000156825 NTM-AS1Q6ZSK4 140 aa13.36□□□□□ -0.27
MBD3-201ENST00000156825 A0A087WYN8 130 aa13.36□□□□□ -0.27
MBD3-201ENST00000156825 BPTFQ12830 3046 aa13.35□□□□□ -0.27
MBD3-201ENST00000156825 CELA1Q9UNI1 258 aa13.35□□□□□ -0.27
MBD3-201ENST00000156825 FAM236DA0A1B0GTK5 79 aa13.35□□□□□ -0.27
MBD3-201ENST00000156825 FAM236CP0DP71 79 aa13.35□□□□□ -0.27
MBD3-201ENST00000156825 SEC61GP60059 68 aa13.34□□□□□ -0.27
MBD3-201ENST00000156825 SPTSSBQ8NFR3 76 aa13.34□□□□□ -0.27
MBD3-201ENST00000156825 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.33□□□□□ -0.27
MBD3-201ENST00000156825 LYPD5Q6UWN5 251 aa13.32□□□□□ -0.28
MBD3-201ENST00000156825 FAM19A3Q7Z5A8 133 aa13.32□□□□□ -0.28
MBD3-201ENST00000156825 C5orf42Q9H799 3197 aa13.32□□□□□ -0.28
MBD3-201ENST00000156825 MAST4O15021 2626 aa13.31□□□□□ -0.28
MBD3-201ENST00000156825 Q8N814 137 aa13.31□□□□□ -0.28
MBD3-201ENST00000156825 A0A087WVE0 104 aa13.3□□□□□ -0.28
MBD3-201ENST00000156825 FAM30AQ9NZY2 134 aa13.3□□□□□ -0.28
MBD3-201ENST00000156825 CSDC2Q9Y534 153 aaKnown RBP13.29□□□□□ -0.28
MBD3-201ENST00000156825 NDUFC2O95298 119 aa13.28□□□□□ -0.28
MBD3-201ENST00000156825 ZNF706Q9Y5V0 76 aaPredicted RBP13.28□□□□□ -0.28
MBD3-201ENST00000156825 KIF25-AS1Q9Y6Z4 181 aa13.28□□□□□ -0.28
MBD3-201ENST00000156825 NUPR2A6NF83 97 aa13.28□□□□□ -0.28
MBD3-201ENST00000156825 SVIPQ8NHG7 77 aa13.28□□□□□ -0.28
MBD3-201ENST00000156825 CCDC179H3BU77 68 aa13.28□□□□□ -0.28
MBD3-201ENST00000156825 RPL28P46779 137 aaKnown RBP13.28□□□□□ -0.28
MBD3-201ENST00000156825 SERP2Q8N6R1 65 aa13.28□□□□□ -0.28
MBD3-201ENST00000156825 Q9UF83 564 aa13.28□□□□□ -0.28
MBD3-201ENST00000156825 C1orf137Q5JT78 98 aa13.27□□□□□ -0.29
MBD3-201ENST00000156825 LINC00474Q9P2X8 69 aa13.26□□□□□ -0.29
MBD3-201ENST00000156825 CIRBP-AS1Q8TBR5 109 aa13.26□□□□□ -0.29
MBD3-201ENST00000156825 C11orf72Q8NBR9 251 aa13.26□□□□□ -0.29
MBD3-201ENST00000156825 NDUFC2-KCTD14E9PQ53 114 aa13.25□□□□□ -0.29
MBD3-201ENST00000156825 REG3GQ6UW15 175 aa13.25□□□□□ -0.29
MBD3-201ENST00000156825 Q6ZRU5 148 aa13.24□□□□□ -0.29
MBD3-201ENST00000156825 IGLV5-52A0A0A0MRZ9 124 aa13.23□□□□□ -0.29
MBD3-201ENST00000156825 C10orf25Q5T742 122 aa13.23□□□□□ -0.29
MBD3-201ENST00000156825 RANBP2P49792 3224 aaKnown RBP13.23□□□□□ -0.29
MBD3-201ENST00000156825 A0A1B0GUV1 79 aa13.23□□□□□ -0.29
MBD3-201ENST00000156825 LINC01556Q5JQF7 62 aa13.23□□□□□ -0.29
MBD3-201ENST00000156825 BRCA2P51587 3418 aa13.23□□□□□ -0.29
MBD3-201ENST00000156825 DEFB116Q30KQ4 102 aa13.23□□□□□ -0.29
MBD3-201ENST00000156825 MUC7Q8TAX7 377 aa13.22□□□□□ -0.29
MBD3-201ENST00000156825 CENPEQ02224 2701 aa13.22□□□□□ -0.29
MBD3-201ENST00000156825 PTPRBP23467 1997 aa13.21□□□□□ -0.29
MBD3-201ENST00000156825 IMUPQ9GZP8 106 aa13.2□□□□□ -0.3
MBD3-201ENST00000156825 LINC00337Q8N6G1 96 aa13.2□□□□□ -0.3
MBD3-201ENST00000156825 LINC00315P59091 139 aa13.19□□□□□ -0.3
MBD3-201ENST00000156825 FHL3Q13643 280 aa13.19□□□□□ -0.3
MBD3-201ENST00000156825 PRLHP81277 87 aa13.18□□□□□ -0.3
MBD3-201ENST00000156825 A0A0U1RQV1 116 aa13.18□□□□□ -0.3
MBD3-201ENST00000156825 Q8N2B8 174 aa13.17□□□□□ -0.3
MBD3-201ENST00000156825 COX7CP15954 63 aa13.17□□□□□ -0.3
MBD3-201ENST00000156825 Q6JHZ5 121 aa13.17□□□□□ -0.3
MBD3-201ENST00000156825 MRPL55Q7Z7F7 128 aaKnown RBP13.17□□□□□ -0.3
MBD3-201ENST00000156825 Q8N9L7 120 aa13.17□□□□□ -0.3
MBD3-201ENST00000156825 MKI67P46013 3256 aaKnown RBP13.16□□□□□ -0.3
MBD3-201ENST00000156825 A0A087WSZ3 146 aa13.15□□□□□ -0.3
MBD3-201ENST00000156825 CHD7Q9P2D1 2997 aa13.15□□□□□ -0.3
MBD3-201ENST00000156825 Q6Q795 121 aa13.15□□□□□ -0.3
MBD3-201ENST00000156825 RETNLBQ9BQ08 111 aa13.15□□□□□ -0.3
MBD3-201ENST00000156825 LINC00575Q6W349 94 aa13.15□□□□□ -0.3
MBD3-201ENST00000156825 Q9BRP9 147 aa13.14□□□□□ -0.31
MBD3-201ENST00000156825 ESRGQ1W209 222 aa13.14□□□□□ -0.31
MBD3-201ENST00000156825 IGHV6-1A0A0B4J1U7 121 aa13.14□□□□□ -0.31
MBD3-201ENST00000156825 Q8N3U1 123 aa13.13□□□□□ -0.31
MBD3-201ENST00000156825 LINC00208Q96KT6 92 aa13.13□□□□□ -0.31
MBD3-201ENST00000156825 LINC01547P58512 204 aaPredicted RBP13.12□□□□□ -0.31
MBD3-201ENST00000156825 IGHV3OR16-9A0A0B4J2B5 98 aa13.12□□□□□ -0.31
MBD3-201ENST00000156825 C1orf134Q5TEV5 83 aa13.12□□□□□ -0.31
MBD3-201ENST00000156825 C2orf48Q96LS8 159 aa13.1□□□□□ -0.31
MBD3-201ENST00000156825 LAMA3Q16787 3333 aa13.09□□□□□ -0.31
MBD3-201ENST00000156825 FAM19A4Q96LR4 140 aa13.09□□□□□ -0.31
MBD3-201ENST00000156825 FAM240AA0A1B0GVK7 77 aa13.08□□□□□ -0.32
MBD3-201ENST00000156825 KRTAP24-1Q3LI83 254 aa13.08□□□□□ -0.32
MBD3-201ENST00000156825 C22orf24Q9Y442 160 aa13.07□□□□□ -0.32
MBD3-201ENST00000156825 LINC00846Q9NV44 126 aa13.07□□□□□ -0.32
MBD3-201ENST00000156825 IGLV5-39A0A0G2JS06 123 aa13.06□□□□□ -0.32
MBD3-201ENST00000156825 SBSPONQ8IVN8 264 aa13.06□□□□□ -0.32
MBD3-201ENST00000156825 NDUFC1O43677 76 aa13.05□□□□□ -0.32
MBD3-201ENST00000156825 X6R8D5 127 aa13.05□□□□□ -0.32
MBD3-201ENST00000156825 COL27A1Q8IZC6 1860 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms