RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Dock11A2AF47 2073 aa9.73□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Spsb3Q571F5 354 aa9.73□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Lime1Q9EQR5 269 aa9.73□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Igkv1-99F6XWB2 120 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Gm10842Q3U587 122 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Higd1bQ99JY6 98 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Gm44973A0A140LJJ1 189 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 MalO09198 153 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 H2-DMb1P35737 261 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 4930596D02RikQ3V0H9 216 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Olfr484Q8VFD3 321 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Higd1aQ9JLR9 95 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Apc2Q9Z1K7 2274 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Tspoap1Q7TNF8 1846 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Igkv3-2A0A075B5P0 119 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 P01724 129 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 P01727 129 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Igkv4-90A0A075B5L3 117 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Trav8-1A0A075B641 109 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Rpl35aO55142 110 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Jsrp1Q3MI48 332 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Wdr83osQ6ZWX0 106 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Vmn1r197Q8R265 298 aa9.72□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Zfp36l2P23949 484 aaKnown RBP9.71□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Znf260Q62513 407 aa9.71□□□□□ -0.85
Scn8a-208ENSMUST00000200963 P01896 185 aa9.71□□□□□ -0.85
Scn8a-208ENSMUST00000200963 NrtnP97463 195 aa9.71□□□□□ -0.85
Scn8a-208ENSMUST00000200963 Psg25Q497W1 475 aa9.71□□□□□ -0.85
Scn8a-208ENSMUST00000200963 H1fxQ80ZM5 188 aa9.71□□□□□ -0.86
Scn8a-208ENSMUST00000200963 SelenokQ9JLJ1 94 aa9.71□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Atp5iQ06185 71 aaKnown RBP9.71□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Dmrt3Q80WT2 476 aa9.71□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Znf22Q9ERU3 237 aa9.71□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Gm37388A0A0A6YY46 143 aa9.71□□□□□ -0.86
Scn8a-208ENSMUST00000200963 P01638 115 aa9.71□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Folr2Q05685 251 aa9.71□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Sslp1Q3UN54 99 aa9.71□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Lypd8Q9D7S0 255 aa9.71□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Trdv1A0A075B657 112 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 1700031F05RikB1AX30 191 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Wdr86D3Z757 380 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Nat8b-psE0CYC6 232 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Gm21370Q3T9V6 190 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Ube2d2bQ6ZWY6 147 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Tmem238A9JSM3 176 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Usmg5Q78IK2 58 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Zg16Q8K0C5 167 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 1700001C19RikQ8K168 210 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Anapc10Q8K2H6 185 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Chac1Q8R3J5 223 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Pnrc2Q9CR73 140 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Wnt2P21552 360 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Hist1h4aP62806 103 aaKnown RBP9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Msrb2Q78J03 175 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Ovol1Q9WTJ2 267 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Rs1Q9Z1L4 224 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Map1bP14873 2464 aaKnown RBP9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Trbv12-1A0A0B4J1H0 124 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Efna4O08542 206 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 5730522E02RikQ5SP45 163 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Gkn1Q9CR36 201 aa9.7□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Repin1Q5U4E2 545 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Fgf16Q9ESL8 207 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Lamtor2Q9JHS3 125 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Lsm4Q9QXA5 137 aaKnown RBP9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Psme4Q5SSW2 1843 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Trbv31A0A075B5J5 111 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Cited2O35740 269 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 4930583I09RikQ9D2E3 102 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Cpsf4lE9Q2N0 280 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 P01736 120 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Nrxn2E9Q7X7 1710 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Trav6-4A0A075B6B4 115 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Trbv30A0A0B4J1P1 111 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Tmem92B7ZWI3 162 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 P01741 114 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Hist1h2bfP10853 126 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Hist1h2bbQ64475 126 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Hist1h2bkQ8CGP1 126 aaKnown RBP9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Hist1h2bpQ8CGP2 126 aaKnown RBP9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Ly6g6dQ9Z1Q3 135 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Ighv1-81A0A075B5Y4 117 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Igkv4-62A0A0G2JDW9 117 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Gm43517E9PYS1 339 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Rnf5O35445 180 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Klk1b4P00757 256 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Defb30Q30KN4 75 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Rnf166Q3U9F6 237 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 C1qtnf9Q4ZJN1 333 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Znf787Q8BIF9 381 aa9.69□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Pla2g5P97391 137 aa9.68□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Pglyrp4Q0VB07 374 aa9.68□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Leap2Q91V13 76 aa9.68□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Slc25a39Q9D8K8 359 aa9.68□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Ighv3-8A0A075B5T0 131 aa9.68□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Chd3B1AR17 2055 aa9.68□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Ighv14-1A0A075B5R4 117 aa9.68□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Fxyd7P59648 80 aa9.68□□□□□ -0.86
Scn8a-208ENSMUST00000200963 Csrp1P97315 193 aaKnown RBP9.68□□□□□ -0.86
Scn8a-208ENSMUST00000200963 ElaneQ3UP87 265 aa9.68□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 98.9 ms