RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Gm4567Q3UTA8 301 aa13.49□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Iqcf4Q6P8Y2 204 aa13.49□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Mrpl32Q9DCI9 187 aaKnown RBP13.49□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Gm6970F7DCP6 221 aa13.49□□□□□ -0.25
Ctcf-201ENSMUST00000005841 NpsP0C0P8 89 aa13.49□□□□□ -0.25
Ctcf-201ENSMUST00000005841 KalrnA2CG49 2964 aa13.48□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Khdc1bP0C7A0 126 aa13.48□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Plp1P60202 277 aa13.48□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Oosp2Q4FZG8 168 aa13.48□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Cox11Q6P8I6 275 aa13.48□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Heatr1G3X9B1 2143 aaKnown RBP13.48□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Gm36368A0A1D5RLK8 91 aa13.48□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Colca2F8VPY8 239 aa13.48□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Tctn2Q2MV57 700 aa13.48□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Znf575Q3TXZ1 239 aa13.48□□□□□ -0.25
Ctcf-201ENSMUST00000005841 SelenokQ9JLJ1 94 aa13.48□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Cd27P41272 250 aa13.48□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Pcp4P63054 62 aa13.48□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Q9CR34 168 aa13.48□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Emp2O88662 172 aa13.47□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Zg16Q8K0C5 167 aa13.47□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Card19Q9D1I2 183 aa13.47□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Gm26602M0QWA4 95 aa13.47□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Dnajc30P59041 219 aa13.47□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Med12lQ8BQM9 2157 aa13.46□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Loxl2P58022 776 aa13.46□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Znrd1Q791N7 123 aa13.46□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Olfr958Q8VEY3 312 aa13.46□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Insig2Q91WG1 225 aa13.46□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Tmem11Q8BK08 190 aa13.46□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Fbxl15Q91W61 300 aa13.46□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Hyls1Q9CXX0 307 aa13.46□□□□□ -0.25
Ctcf-201ENSMUST00000005841 Cox8cA6H666 72 aa13.46□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Ly6c1P0CW02 131 aa13.46□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Cd5P13379 494 aa13.46□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Cox8bP48772 70 aa13.46□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Crip1P63254 77 aa13.46□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Olfr761Q7TRJ0 323 aa13.46□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Zfp53Q9Z117 652 aa13.46□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Med13Q5SWW4 2171 aa13.46□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Trav8d-2Q5R1B6 112 aa13.45□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Vmn1r197Q8R265 298 aa13.45□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Olfr1336Q8VGH5 314 aa13.45□□□□□ -0.26
Ctcf-201ENSMUST00000005841 4931428L18RikQ9D4S9 127 aa13.45□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Trdv2-1A0A0G2JGB9 116 aa13.45□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Trdv2-2Q5R1A4 116 aa13.45□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Cdc42ep2Q8JZX9 214 aa13.45□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Eny2Q9JIX0 101 aaKnown RBP13.45□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Olfr810Q8VFH9 312 aa13.45□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Gm15294V9GXA7 121 aa13.45□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Timm8a1Q9WVA2 97 aa13.44□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Olfr466E9Q2B9 308 aa13.44□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Foxc2Q61850 494 aa13.44□□□□□ -0.26
Ctcf-201ENSMUST00000005841 TectaO08523 2155 aa13.44□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Necap2Q9D1J1 266 aa13.44□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Dolpp1Q9JMF7 238 aa13.44□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Ccdc188F6WEU2 249 aa13.43□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Mtatp8P03930 67 aa13.43□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Spem1Q5F289 310 aa13.43□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Ccsmst1Q6RUT7 136 aa13.43□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Tmem52Q9D702 196 aa13.43□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Olfr1337A2ACY8 315 aa13.43□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Q6DIA7 600 aa13.43□□□□□ -0.26
Ctcf-201ENSMUST00000005841 TdhQ8K3F7 373 aa13.43□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Tomm6Q9CQN3 74 aa13.43□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Prr23a3Q9CWP9 254 aa13.43□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Gm15128A2ADW8 449 aa13.43□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Luzp4B1AV09 449 aa13.43□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Gm15107B1B0X0 449 aa13.43□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Gm15097E9QA14 449 aa13.43□□□□□ -0.26
Ctcf-201ENSMUST00000005841 P04946 108 aa13.43□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Tmem241Q3UME2 297 aa13.43□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Ubald1Q6P3B2 176 aa13.43□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Arl6ip6Q8BH07 226 aa13.43□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Slc25a16Q8C0K5 332 aa13.43□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Rnd1Q8BLR7 232 aa13.42□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Tmem29A2ANF5 204 aa13.42□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Bak1O08734 209 aa13.42□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Wfdc2Q9DAU7 174 aa13.42□□□□□ -0.26
Ctcf-201ENSMUST00000005841 BC030500E9Q6W0 185 aa13.41□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Bsph1Q3UW26 133 aa13.41□□□□□ -0.26
Ctcf-201ENSMUST00000005841 PtafrQ62035 341 aa13.41□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Slc25a15Q9WVD5 301 aa13.41□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Zfp979A2A799 407 aa13.41□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Ca1P13634 261 aa13.41□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Folr2Q05685 251 aa13.41□□□□□ -0.26
Ctcf-201ENSMUST00000005841 G0s2Q61585 103 aa13.41□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Malsu1Q9CWV0 228 aa13.41□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Ang6Q5GAN0 147 aa13.41□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Olfr411Q7TRW8 315 aa13.41□□□□□ -0.26
Ctcf-201ENSMUST00000005841 PgpQ8CHP8 321 aa13.41□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Rchy1Q9CR50 261 aa13.41□□□□□ -0.26
Ctcf-201ENSMUST00000005841 F5O88783 2183 aa13.4□□□□□ -0.26
Ctcf-201ENSMUST00000005841 A0A1L1SR50 188 aa13.4□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Samt3A2ARK7 233 aa13.4□□□□□ -0.26
Ctcf-201ENSMUST00000005841 P01759 136 aa13.4□□□□□ -0.26
Ctcf-201ENSMUST00000005841 RbpjP31266 526 aa13.4□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Q24JP4 165 aa13.4□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Gpr6Q6YNI2 363 aa13.4□□□□□ -0.26
Ctcf-201ENSMUST00000005841 Igfbpl1Q80W15 270 aa13.4□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms