RNA–Protein interactions for RNA: ENST00000641642.1

CASC19-247, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-247ENST00000641642 HIST3H2BBQ8N257 126 aa6.96□□□□□ -1.3
CASC19-247ENST00000641642 FAM104AQ969W3 186 aa6.96□□□□□ -1.3
CASC19-247ENST00000641642 UBE2WQ96B02 151 aa6.96□□□□□ -1.3
CASC19-247ENST00000641642 MAP1LC3CQ9BXW4 147 aa6.96□□□□□ -1.3
CASC19-247ENST00000641642 C9orf118A6NHY6 69 aa6.95□□□□□ -1.3
CASC19-247ENST00000641642 PRSS1P07477 247 aa6.95□□□□□ -1.3
CASC19-247ENST00000641642 AKR1D1P51857 326 aa6.95□□□□□ -1.3
CASC19-247ENST00000641642 ENHOQ6UWT2 76 aa6.95□□□□□ -1.3
CASC19-247ENST00000641642 SPATA12Q7Z6I5 190 aa6.95□□□□□ -1.3
CASC19-247ENST00000641642 BAALCQ8WXS3 180 aa6.95□□□□□ -1.3
CASC19-247ENST00000641642 TM2D2Q9BX73 214 aa6.95□□□□□ -1.3
CASC19-247ENST00000641642 LINC00959A0A1B0GUT2 108 aa6.94□□□□□ -1.3
CASC19-247ENST00000641642 IFITM10A6NMD0 228 aa6.94□□□□□ -1.3
CASC19-247ENST00000641642 C1orf43Q9BWL3 253 aa6.94□□□□□ -1.3
CASC19-247ENST00000641642 CST9LQ9H4G1 147 aa6.94□□□□□ -1.3
CASC19-247ENST00000641642 VPS13DQ5THJ4 4388 aa6.93□□□□□ -1.3
CASC19-247ENST00000641642 PRSS29PA6NIE9 313 aa6.93□□□□□ -1.3
CASC19-247ENST00000641642 FABP4P15090 132 aa6.93□□□□□ -1.3
CASC19-247ENST00000641642 UBE2D1P51668 147 aa6.93□□□□□ -1.3
CASC19-247ENST00000641642 PET117Q6UWS5 81 aa6.93□□□□□ -1.3
CASC19-247ENST00000641642 LINC00173Q6ZV60 143 aa6.93□□□□□ -1.3
CASC19-247ENST00000641642 HIST1H2BLQ99880 126 aa6.93□□□□□ -1.3
CASC19-247ENST00000641642 OPRPNQ99935 248 aaPredicted RBP6.93□□□□□ -1.3
CASC19-247ENST00000641642 TRAV13-1A0A0B4J241 112 aa6.92□□□□□ -1.3
CASC19-247ENST00000641642 HERVK_113P63121 156 aa6.92□□□□□ -1.3
CASC19-247ENST00000641642 CD164L2Q6UWJ8 174 aa6.92□□□□□ -1.3
CASC19-247ENST00000641642 KRTAP1-5Q9BYS1 174 aa6.92□□□□□ -1.3
CASC19-247ENST00000641642 TINCRA0A1B0GVN0 87 aa6.91□□□□□ -1.3
CASC19-247ENST00000641642 F8VRH5 84 aa6.91□□□□□ -1.3
CASC19-247ENST00000641642 SYS1-DBNDD2H3BUS1 97 aa6.91□□□□□ -1.3
CASC19-247ENST00000641642 SLPIP03973 132 aa6.91□□□□□ -1.3
CASC19-247ENST00000641642 C1orf134Q5TEV5 83 aa6.91□□□□□ -1.3
CASC19-247ENST00000641642 LINC01561Q8N1V8 128 aa6.91□□□□□ -1.3
CASC19-247ENST00000641642 C6orf223Q8N319 242 aa6.91□□□□□ -1.3
CASC19-247ENST00000641642 CHCHD10Q8WYQ3 142 aaPredicted RBP6.91□□□□□ -1.3
CASC19-247ENST00000641642 TMA7Q9Y2S6 64 aaKnown RBP6.91□□□□□ -1.3
CASC19-247ENST00000641642 ALMS1Q8TCU4 4167 aa6.9□□□□□ -1.3
CASC19-247ENST00000641642 IGKV2D-24A0A075B6R9 120 aa6.9□□□□□ -1.3
CASC19-247ENST00000641642 IGKV3OR2-268A0A0C4DH90 116 aa6.9□□□□□ -1.3
CASC19-247ENST00000641642 C20orf202A1L168 122 aa6.9□□□□□ -1.3
CASC19-247ENST00000641642 IGLC3P0DOY3 106 aa6.9□□□□□ -1.3
CASC19-247ENST00000641642 RNASE13Q5GAN3 156 aaKnown RBP6.9□□□□□ -1.3
CASC19-247ENST00000641642 LINC00242Q5T6M2 205 aa6.9□□□□□ -1.3
CASC19-247ENST00000641642 CLPSL2Q6UWE3 100 aa6.9□□□□□ -1.3
CASC19-247ENST00000641642 GEMIN7Q9H840 131 aaKnown RBP6.9□□□□□ -1.3
CASC19-247ENST00000641642 CHTOPQ9Y3Y2 248 aaKnown RBP6.9□□□□□ -1.3
CASC19-247ENST00000641642 LYSTQ99698 3801 aa6.89□□□□□ -1.31
CASC19-247ENST00000641642 IGLV5-45A0A087WSX0 123 aa6.89□□□□□ -1.31
CASC19-247ENST00000641642 IGHV3OR16-9A0A0B4J2B5 98 aa6.89□□□□□ -1.31
CASC19-247ENST00000641642 M0R2N4 97 aa6.89□□□□□ -1.31
CASC19-247ENST00000641642 C3orf79P0CE67 100 aa6.89□□□□□ -1.31
CASC19-247ENST00000641642 PLNP26678 52 aa6.89□□□□□ -1.31
CASC19-247ENST00000641642 ODF1Q14990 250 aa6.89□□□□□ -1.31
CASC19-247ENST00000641642 LINC01545Q5VT33 79 aa6.89□□□□□ -1.31
CASC19-247ENST00000641642 CFAP161Q6P656 301 aa6.89□□□□□ -1.31
CASC19-247ENST00000641642 Q9HAA7 133 aa6.89□□□□□ -1.31
CASC19-247ENST00000641642 DNAH1Q9P2D7 4330 aa6.88□□□□□ -1.31
CASC19-247ENST00000641642 H3BRM9 83 aa6.88□□□□□ -1.31
CASC19-247ENST00000641642 PSCAO43653 123 aa6.88□□□□□ -1.31
CASC19-247ENST00000641642 APOMO95445 188 aa6.88□□□□□ -1.31
CASC19-247ENST00000641642 XCL1P47992 114 aa6.88□□□□□ -1.31
CASC19-247ENST00000641642 KRTDAPP60985 99 aa6.88□□□□□ -1.31
CASC19-247ENST00000641642 KRTAP26-1Q6PEX3 210 aa6.88□□□□□ -1.31
CASC19-247ENST00000641642 DNAH6Q9C0G6 4158 aa6.88□□□□□ -1.31
CASC19-247ENST00000641642 IGLV4-69A0A075B6H9 119 aa6.87□□□□□ -1.31
CASC19-247ENST00000641642 IGLV10-54A0A075B6I4 117 aa6.87□□□□□ -1.31
CASC19-247ENST00000641642 A0A087WZ39 114 aa6.87□□□□□ -1.31
CASC19-247ENST00000641642 A0A0J9YXV3 536 aa6.87□□□□□ -1.31
CASC19-247ENST00000641642 GAGE12HA6NDE8 117 aa6.87□□□□□ -1.31
CASC19-247ENST00000641642 COX7A2LO14548 114 aa6.87□□□□□ -1.31
CASC19-247ENST00000641642 DPM2O94777 84 aa6.87□□□□□ -1.31
CASC19-247ENST00000641642 FOXI1Q12951 378 aa6.87□□□□□ -1.31
CASC19-247ENST00000641642 ZC2HC1BQ5TFG8 222 aa6.87□□□□□ -1.31
CASC19-247ENST00000641642 Q6ZRN7 208 aaPredicted RBP6.87□□□□□ -1.31
CASC19-247ENST00000641642 MRPL35Q9NZE8 188 aaKnown RBP6.87□□□□□ -1.31
CASC19-247ENST00000641642 KMT2AQ03164 3969 aa6.86□□□□□ -1.31
CASC19-247ENST00000641642 IGKCP01834 107 aa6.86□□□□□ -1.31
CASC19-247ENST00000641642 C14orf177Q52M58 125 aa6.86□□□□□ -1.31
CASC19-247ENST00000641642 CHAC1Q9BUX1 264 aa6.86□□□□□ -1.31
CASC19-247ENST00000641642 IGHV1-58A0A0C4DH39 117 aa6.85□□□□□ -1.31
CASC19-247ENST00000641642 C11orf86A6NJI1 115 aa6.85□□□□□ -1.31
CASC19-247ENST00000641642 F8WDY8 70 aa6.85□□□□□ -1.31
CASC19-247ENST00000641642 H0Y8G0 127 aa6.85□□□□□ -1.31
CASC19-247ENST00000641642 MALP21145 153 aa6.85□□□□□ -1.31
CASC19-247ENST00000641642 COX6A2Q02221 97 aa6.85□□□□□ -1.31
CASC19-247ENST00000641642 LINC00336Q6ZUF6 198 aa6.85□□□□□ -1.31
CASC19-247ENST00000641642 LINC00469Q8N7U9 141 aa6.85□□□□□ -1.31
CASC19-247ENST00000641642 OR10D4PQ8NGN7 298 aa6.85□□□□□ -1.31
CASC19-247ENST00000641642 CDKN2A-AS1Q9UH64 79 aa6.84□□□□□ -1.31
CASC19-247ENST00000641642 IGHV3-64A0A075B6Q5 118 aa6.83□□□□□ -1.32
CASC19-247ENST00000641642 ZNF22P17026 224 aaPredicted RBP6.83□□□□□ -1.32
CASC19-247ENST00000641642 HERVK_113P61574 105 aa6.83□□□□□ -1.32
CASC19-247ENST00000641642 TMEM170BQ5T4T1 132 aa6.83□□□□□ -1.32
CASC19-247ENST00000641642 C5orf38Q86SI9 138 aa6.83□□□□□ -1.32
CASC19-247ENST00000641642 SACSQ9NZJ4 4579 aa6.83□□□□□ -1.32
CASC19-247ENST00000641642 LRCOL1A6NCL2 159 aa6.82□□□□□ -1.32
CASC19-247ENST00000641642 JOSD1Q15040 202 aaPredicted RBP6.82□□□□□ -1.32
CASC19-247ENST00000641642 SFTA2Q6UW10 78 aa6.82□□□□□ -1.32
CASC19-247ENST00000641642 MAPKAPK5-AS1Q8N8E1 139 aa6.82□□□□□ -1.32
CASC19-247ENST00000641642 GVQW2A0A096LPI5 108 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms