RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 FABP4P15090 132 aa6.06□□□□□ -1.44
SCARB2-225ENST00000640900 FOXI1Q12951 378 aa6.06□□□□□ -1.44
SCARB2-225ENST00000640900 ODF1Q14990 250 aa6.06□□□□□ -1.44
SCARB2-225ENST00000640900 NFE4Q86UQ8 179 aa6.06□□□□□ -1.44
SCARB2-225ENST00000640900 MAPKAPK5-AS1Q8N8E1 139 aa6.06□□□□□ -1.44
SCARB2-225ENST00000640900 SYS1-DBNDD2H3BUS1 97 aa6.05□□□□□ -1.44
SCARB2-225ENST00000640900 M0R2N4 97 aa6.05□□□□□ -1.44
SCARB2-225ENST00000640900 C3orf79P0CE67 100 aa6.05□□□□□ -1.44
SCARB2-225ENST00000640900 IGLC3P0DOY3 106 aa6.05□□□□□ -1.44
SCARB2-225ENST00000640900 COX6A2Q02221 97 aa6.05□□□□□ -1.44
SCARB2-225ENST00000640900 CLPSL2Q6UWE3 100 aa6.05□□□□□ -1.44
SCARB2-225ENST00000640900 CD164L2Q6UWJ8 174 aa6.05□□□□□ -1.44
SCARB2-225ENST00000640900 C6orf223Q8N319 242 aa6.05□□□□□ -1.44
SCARB2-225ENST00000640900 CHCHD10Q8WYQ3 142 aaPredicted RBP6.05□□□□□ -1.44
SCARB2-225ENST00000640900 C2orf88Q9BSF0 95 aa6.05□□□□□ -1.44
SCARB2-225ENST00000640900 COX11Q9Y6N1 276 aa6.05□□□□□ -1.44
SCARB2-225ENST00000640900 TRAV13-1A0A0B4J241 112 aa6.04□□□□□ -1.44
SCARB2-225ENST00000640900 TINCRA0A1B0GVN0 87 aa6.04□□□□□ -1.44
SCARB2-225ENST00000640900 CRPP02741 224 aa6.04□□□□□ -1.44
SCARB2-225ENST00000640900 SS18Q15532 418 aa6.04□□□□□ -1.44
SCARB2-225ENST00000640900 LINC01545Q5VT33 79 aa6.04□□□□□ -1.44
SCARB2-225ENST00000640900 PET117Q6UWS5 81 aa6.04□□□□□ -1.44
SCARB2-225ENST00000640900 LINC01561Q8N1V8 128 aa6.04□□□□□ -1.44
SCARB2-225ENST00000640900 RMI2Q96E14 147 aa6.04□□□□□ -1.44
SCARB2-225ENST00000640900 MAP1LC3CQ9BXW4 147 aa6.04□□□□□ -1.44
SCARB2-225ENST00000640900 TMA7Q9Y2S6 64 aaKnown RBP6.04□□□□□ -1.44
SCARB2-225ENST00000640900 DNAH5Q8TE73 4624 aa6.04□□□□□ -1.44
SCARB2-225ENST00000640900 A0A087WZ39 114 aa6.03□□□□□ -1.44
SCARB2-225ENST00000640900 A0A0J9YXV3 536 aa6.03□□□□□ -1.44
SCARB2-225ENST00000640900 LRCOL1A6NCL2 159 aa6.03□□□□□ -1.44
SCARB2-225ENST00000640900 F8VRH5 84 aa6.03□□□□□ -1.44
SCARB2-225ENST00000640900 RTL8CO15255 209 aa6.03□□□□□ -1.44
SCARB2-225ENST00000640900 PRSS1P07477 247 aa6.03□□□□□ -1.44
SCARB2-225ENST00000640900 SEC11AP67812 179 aa6.03□□□□□ -1.44
SCARB2-225ENST00000640900 XP32Q5T750 250 aa6.03□□□□□ -1.44
SCARB2-225ENST00000640900 C1orf134Q5TEV5 83 aa6.03□□□□□ -1.44
SCARB2-225ENST00000640900 C1orf43Q9BWL3 253 aa6.03□□□□□ -1.44
SCARB2-225ENST00000640900 TM2D2Q9BX73 214 aa6.03□□□□□ -1.44
SCARB2-225ENST00000640900 Q9HAA7 133 aa6.03□□□□□ -1.44
SCARB2-225ENST00000640900 DYNC1H1Q14204 4646 aaKnown RBP6.02□□□□□ -1.45
SCARB2-225ENST00000640900 IGLV10-54A0A075B6I4 117 aa6.02□□□□□ -1.45
SCARB2-225ENST00000640900 IGKV2D-24A0A075B6R9 120 aa6.02□□□□□ -1.45
SCARB2-225ENST00000640900 GAGE12HA6NDE8 117 aa6.02□□□□□ -1.45
SCARB2-225ENST00000640900 C11orf86A6NJI1 115 aa6.02□□□□□ -1.45
SCARB2-225ENST00000640900 S100A2P29034 98 aa6.02□□□□□ -1.45
SCARB2-225ENST00000640900 HERVK_113P63121 156 aa6.02□□□□□ -1.45
SCARB2-225ENST00000640900 MRPL35Q9NZE8 188 aaKnown RBP6.02□□□□□ -1.45
SCARB2-225ENST00000640900 CHTOPQ9Y3Y2 248 aaKnown RBP6.02□□□□□ -1.45
SCARB2-225ENST00000640900 PKHD1P08F94 4074 aa6.01□□□□□ -1.45
SCARB2-225ENST00000640900 DNAH8Q96JB1 4490 aa6.01□□□□□ -1.45
SCARB2-225ENST00000640900 IGKV3OR2-268A0A0C4DH90 116 aa6.01□□□□□ -1.45
SCARB2-225ENST00000640900 ZNF22P17026 224 aaPredicted RBP6.01□□□□□ -1.45
SCARB2-225ENST00000640900 XCL1P47992 114 aa6.01□□□□□ -1.45
SCARB2-225ENST00000640900 IGLV5-39A0A0G2JS06 123 aa6□□□□□ -1.45
SCARB2-225ENST00000640900 COX7A2LO14548 114 aa6□□□□□ -1.45
SCARB2-225ENST00000640900 CHAC1Q9BUX1 264 aa6□□□□□ -1.45
SCARB2-225ENST00000640900 CDKN2A-AS1Q9UH64 79 aa6□□□□□ -1.45
SCARB2-225ENST00000640900 GVQW2A0A096LPI5 108 aaPredicted RBP5.99□□□□□ -1.45
SCARB2-225ENST00000640900 DPM2O94777 84 aa5.99□□□□□ -1.45
SCARB2-225ENST00000640900 PLNP26678 52 aa5.99□□□□□ -1.45
SCARB2-225ENST00000640900 KRTDAPP60985 99 aa5.99□□□□□ -1.45
SCARB2-225ENST00000640900 WFDC2Q14508 124 aa5.99□□□□□ -1.45
SCARB2-225ENST00000640900 C15orf56Q8N910 161 aa5.99□□□□□ -1.45
SCARB2-225ENST00000640900 OR10D4PQ8NGN7 298 aa5.99□□□□□ -1.45
SCARB2-225ENST00000640900 GEMIN7Q9H840 131 aaKnown RBP5.99□□□□□ -1.45
SCARB2-225ENST00000640900 IGHV3-64A0A075B6Q5 118 aa5.98□□□□□ -1.45
SCARB2-225ENST00000640900 A0A087WTM6 91 aa5.98□□□□□ -1.45
SCARB2-225ENST00000640900 TMEM223A0PJW6 202 aa5.98□□□□□ -1.45
SCARB2-225ENST00000640900 SMIM1B2RUZ4 78 aa5.98□□□□□ -1.45
SCARB2-225ENST00000640900 KIAA0087Q14695 138 aa5.98□□□□□ -1.45
SCARB2-225ENST00000640900 C5orf38Q86SI9 138 aa5.98□□□□□ -1.45
SCARB2-225ENST00000640900 LRP1BQ9NZR2 4599 aa5.97□□□□□ -1.45
SCARB2-225ENST00000640900 IGHV1-58A0A0C4DH39 117 aa5.97□□□□□ -1.45
SCARB2-225ENST00000640900 USP17L23D6RBM5 183 aa5.97□□□□□ -1.45
SCARB2-225ENST00000640900 IGKCP01834 107 aa5.97□□□□□ -1.45
SCARB2-225ENST00000640900 AKR1D1P51857 326 aa5.97□□□□□ -1.45
SCARB2-225ENST00000640900 JOSD1Q15040 202 aaPredicted RBP5.97□□□□□ -1.45
SCARB2-225ENST00000640900 LINC00336Q6ZUF6 198 aa5.97□□□□□ -1.45
SCARB2-225ENST00000640900 LINC00469Q8N7U9 141 aa5.97□□□□□ -1.45
SCARB2-225ENST00000640900 PMCHL2Q9BQD1 86 aa5.97□□□□□ -1.45
SCARB2-225ENST00000640900 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.46
SCARB2-225ENST00000640900 LOC105371267A0A1B0GV96 52 aa5.96□□□□□ -1.46
SCARB2-225ENST00000640900 H0Y8G0 127 aa5.96□□□□□ -1.46
SCARB2-225ENST00000640900 SLPIP03973 132 aa5.96□□□□□ -1.46
SCARB2-225ENST00000640900 CFAP161Q6P656 301 aa5.96□□□□□ -1.46
SCARB2-225ENST00000640900 KRTAP4-6Q9BYQ5 205 aa5.96□□□□□ -1.46
SCARB2-225ENST00000640900 A0A1B0GVY2 172 aa5.95□□□□□ -1.46
SCARB2-225ENST00000640900 C20orf202A1L168 122 aa5.95□□□□□ -1.46
SCARB2-225ENST00000640900 F8WDY8 70 aa5.95□□□□□ -1.46
SCARB2-225ENST00000640900 H3BRM9 83 aa5.95□□□□□ -1.46
SCARB2-225ENST00000640900 CNBPP62633 177 aaKnown RBP5.95□□□□□ -1.46
SCARB2-225ENST00000640900 NTN5Q8WTR8 489 aaPredicted RBP5.95□□□□□ -1.46
SCARB2-225ENST00000640900 C2orf48Q96LS8 159 aa5.95□□□□□ -1.46
SCARB2-225ENST00000640900 PSCAO43653 123 aa5.94□□□□□ -1.46
SCARB2-225ENST00000640900 APOMO95445 188 aa5.94□□□□□ -1.46
SCARB2-225ENST00000640900 SPINK8P0C7L1 97 aa5.94□□□□□ -1.46
SCARB2-225ENST00000640900 MALP21145 153 aa5.94□□□□□ -1.46
SCARB2-225ENST00000640900 C14orf177Q52M58 125 aa5.94□□□□□ -1.46
SCARB2-225ENST00000640900 PYY3Q5JQD4 70 aa5.94□□□□□ -1.46
SCARB2-225ENST00000640900 TMEM170BQ5T4T1 132 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms