RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 CITED1Q99966 193 aa4.09□□□□□ -1.76
SCN3A-210ENST00000640652 SND1-IT1Q9HBX3 110 aa4.09□□□□□ -1.76
SCN3A-210ENST00000640652 CSDC2Q9Y534 153 aaKnown RBP4.09□□□□□ -1.76
SCN3A-210ENST00000640652 NIPBLQ6KC79 2804 aaeCLIP4.08□□□□□ -1.76
SCN3A-210ENST00000640652 CXCL5P42830 114 aa4.08□□□□□ -1.76
SCN3A-210ENST00000640652 HIST2H2BCQ6DN03 193 aa4.08□□□□□ -1.76
SCN3A-210ENST00000640652 HIST2H2BDQ6DRA6 164 aa4.08□□□□□ -1.76
SCN3A-210ENST00000640652 TRAV26-1A0A087WT03 109 aa4.08□□□□□ -1.76
SCN3A-210ENST00000640652 ORMDL1Q9P0S3 153 aa4.08□□□□□ -1.76
SCN3A-210ENST00000640652 XGP55808 180 aa4.08□□□□□ -1.76
SCN3A-210ENST00000640652 CDKN2A-AS1Q9UH64 79 aa4.08□□□□□ -1.76
SCN3A-210ENST00000640652 INSL3P51460 131 aa4.08□□□□□ -1.76
SCN3A-210ENST00000640652 FAM222AQ5U5X8 452 aa4.08□□□□□ -1.76
SCN3A-210ENST00000640652 C11orf68Q9H3H3 251 aaKnown RBP4.08□□□□□ -1.76
SCN3A-210ENST00000640652 FAM236AA0A1B0GUQ0 79 aa4.07□□□□□ -1.76
SCN3A-210ENST00000640652 FAM236BA0A1B0GV22 79 aa4.07□□□□□ -1.76
SCN3A-210ENST00000640652 DEFB114Q30KQ6 69 aa4.07□□□□□ -1.76
SCN3A-210ENST00000640652 C9orf153Q5TBE3 101 aa4.07□□□□□ -1.76
SCN3A-210ENST00000640652 DEFB130BP0DP73 79 aa4.07□□□□□ -1.76
SCN3A-210ENST00000640652 DEFB130AP0DP74 79 aa4.07□□□□□ -1.76
SCN3A-210ENST00000640652 LINC00315P59091 139 aa4.07□□□□□ -1.76
SCN3A-210ENST00000640652 CEMP1Q6PRD7 247 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-210ENST00000640652 ZNF702PQ9H963 129 aa4.07□□□□□ -1.76
SCN3A-210ENST00000640652 ATOX1O00244 68 aa4.07□□□□□ -1.76
SCN3A-210ENST00000640652 APOC4P55056 127 aa4.07□□□□□ -1.76
SCN3A-210ENST00000640652 RS1O15537 224 aa4.07□□□□□ -1.76
SCN3A-210ENST00000640652 LRRC75A-AS1Q8N1F1 130 aa4.07□□□□□ -1.76
SCN3A-210ENST00000640652 B5MCH6 92 aa4.06□□□□□ -1.76
SCN3A-210ENST00000640652 IBA57-AS1B1ANH7 110 aa4.06□□□□□ -1.76
SCN3A-210ENST00000640652 IGHV4-31P0DP07 118 aa4.06□□□□□ -1.76
SCN3A-210ENST00000640652 BEAN1Q3B7T3 259 aa4.06□□□□□ -1.76
SCN3A-210ENST00000640652 LINC00643Q86TS7 51 aa4.06□□□□□ -1.76
SCN3A-210ENST00000640652 PFN2P35080 140 aa4.06□□□□□ -1.76
SCN3A-210ENST00000640652 CDIP1Q9H305 208 aa4.06□□□□□ -1.76
SCN3A-210ENST00000640652 DNAJC9-AS1A6NH13 148 aa4.05□□□□□ -1.76
SCN3A-210ENST00000640652 CHCHD7Q9BUK0 85 aa4.05□□□□□ -1.76
SCN3A-210ENST00000640652 ATP5EP2Q5VTU8 51 aa4.05□□□□□ -1.76
SCN3A-210ENST00000640652 IGLV5-45A0A087WSX0 123 aa4.05□□□□□ -1.76
SCN3A-210ENST00000640652 XCL1P47992 114 aa4.05□□□□□ -1.76
SCN3A-210ENST00000640652 UBL5Q9BZL1 73 aa4.05□□□□□ -1.76
SCN3A-210ENST00000640652 NBPF19A0A087WUL8 3843 aa4.05□□□□□ -1.76
SCN3A-210ENST00000640652 TRBV6-4A0A1B0GX49 114 aa4.05□□□□□ -1.76
SCN3A-210ENST00000640652 C10orf99Q6UWK7 81 aa4.05□□□□□ -1.76
SCN3A-210ENST00000640652 NRGNQ92686 78 aa4.05□□□□□ -1.76
SCN3A-210ENST00000640652 BAHCC1Q9P281 2608 aa4.05□□□□□ -1.76
SCN3A-210ENST00000640652 JMJD7-PLA2G4BH0Y9G9 81 aa4.05□□□□□ -1.76
SCN3A-210ENST00000640652 GYPEP15421 78 aa4.05□□□□□ -1.76
SCN3A-210ENST00000640652 COX17Q14061 63 aa4.05□□□□□ -1.76
SCN3A-210ENST00000640652 TMEM256-PLSCR3K7ERE1 68 aa4.04□□□□□ -1.76
SCN3A-210ENST00000640652 ZNF575Q86XF7 245 aa4.04□□□□□ -1.76
SCN3A-210ENST00000640652 LAMTOR3Q9UHA4 124 aa4.04□□□□□ -1.76
SCN3A-210ENST00000640652 MIR7-3HGQ8N6C7 128 aa4.04□□□□□ -1.76
SCN3A-210ENST00000640652 ADAMTSL4-AS1Q5T5F5 129 aa4.04□□□□□ -1.76
SCN3A-210ENST00000640652 SBSPONQ8IVN8 264 aa4.04□□□□□ -1.76
SCN3A-210ENST00000640652 SS18L2Q9UHA2 77 aa4.04□□□□□ -1.76
SCN3A-210ENST00000640652 DSCR8Q96T75 97 aa4.04□□□□□ -1.76
SCN3A-210ENST00000640652 Q6ZTI0 123 aa4.04□□□□□ -1.76
SCN3A-210ENST00000640652 FAM110AQ9BQ89 295 aa4.04□□□□□ -1.76
SCN3A-210ENST00000640652 MGAM2Q2M2H8 2515 aa4.04□□□□□ -1.76
SCN3A-210ENST00000640652 HIST1H4AP62805 103 aaKnown RBP4.04□□□□□ -1.76
SCN3A-210ENST00000640652 PPDPFQ9H3Y8 114 aa4.03□□□□□ -1.76
SCN3A-210ENST00000640652 DAD1P61803 113 aa4.03□□□□□ -1.76
SCN3A-210ENST00000640652 UQCRQO14949 82 aa4.03□□□□□ -1.76
SCN3A-210ENST00000640652 CRLF1O75462 422 aa4.03□□□□□ -1.76
SCN3A-210ENST00000640652 IGLV5-39A0A0G2JS06 123 aa4.03□□□□□ -1.76
SCN3A-210ENST00000640652 SMIM9A6NGZ8 99 aa4.03□□□□□ -1.76
SCN3A-210ENST00000640652 C11orf72Q8NBR9 251 aa4.03□□□□□ -1.76
SCN3A-210ENST00000640652 AVPP01185 164 aa4.03□□□□□ -1.76
SCN3A-210ENST00000640652 PDE6GP18545 87 aa4.03□□□□□ -1.76
SCN3A-210ENST00000640652 SMIM1B2RUZ4 78 aa4.03□□□□□ -1.76
SCN3A-210ENST00000640652 PROK1P58294 105 aa4.03□□□□□ -1.76
SCN3A-210ENST00000640652 TRBV6-8A0A0A6YYG3 113 aa4.03□□□□□ -1.77
SCN3A-210ENST00000640652 EDN2P20800 178 aa4.03□□□□□ -1.77
SCN3A-210ENST00000640652 ANGP03950 147 aaKnown RBP4.02□□□□□ -1.77
SCN3A-210ENST00000640652 LINC00242Q5T6M2 205 aa4.02□□□□□ -1.77
SCN3A-210ENST00000640652 SMCPP49901 116 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-210ENST00000640652 MUC7Q8TAX7 377 aa4.02□□□□□ -1.77
SCN3A-210ENST00000640652 CDC42SE2Q9NRR3 84 aa4.02□□□□□ -1.77
SCN3A-210ENST00000640652 J3KT08 172 aa4.02□□□□□ -1.77
SCN3A-210ENST00000640652 Q8N2B8 174 aa4.02□□□□□ -1.77
SCN3A-210ENST00000640652 C14orf132Q9NPU4 83 aa4.01□□□□□ -1.77
SCN3A-210ENST00000640652 LECT2O14960 151 aa4.01□□□□□ -1.77
SCN3A-210ENST00000640652 RPL28P46779 137 aaKnown RBP4.01□□□□□ -1.77
SCN3A-210ENST00000640652 SMIM20Q8N5G0 67 aa4.01□□□□□ -1.77
SCN3A-210ENST00000640652 LYRM9A8MSI8 78 aa4.01□□□□□ -1.77
SCN3A-210ENST00000640652 A0A087WZ39 114 aa4.01□□□□□ -1.77
SCN3A-210ENST00000640652 F5H768 121 aa4.01□□□□□ -1.77
SCN3A-210ENST00000640652 C5orf38Q86SI9 138 aa4.01□□□□□ -1.77
SCN3A-210ENST00000640652 TRBV7-7A0A0K0K1E9 115 aa4□□□□□ -1.77
SCN3A-210ENST00000640652 hADV29S1A0JD25 119 aa4□□□□□ -1.77
SCN3A-210ENST00000640652 ZNF561-AS1K7EIQ3 104 aa4□□□□□ -1.77
SCN3A-210ENST00000640652 A8MZ25 164 aa4□□□□□ -1.77
SCN3A-210ENST00000640652 NDUFA7O95182 113 aa4□□□□□ -1.77
SCN3A-210ENST00000640652 C3orf22Q8N5N4 141 aa4□□□□□ -1.77
SCN3A-210ENST00000640652 CITED2Q99967 270 aaPredicted RBP4□□□□□ -1.77
SCN3A-210ENST00000640652 A0A1B0GX51 115 aa4□□□□□ -1.77
SCN3A-210ENST00000640652 CLPSL2Q6UWE3 100 aa4□□□□□ -1.77
SCN3A-210ENST00000640652 PRO0255Q9UI72 69 aa4□□□□□ -1.77
SCN3A-210ENST00000640652 ODF3L2Q3SX64 289 aa4□□□□□ -1.77
SCN3A-210ENST00000640652 C9orf66Q5T8R8 295 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms