RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 TEX49A0A1B0GTD5 131 aa12.74□□□□□ -0.37
SCARB2-223ENST00000640640 CDC42SE2Q9NRR3 84 aa12.74□□□□□ -0.37
SCARB2-223ENST00000640640 IGLV2-18A0A075B6J9 118 aa12.73□□□□□ -0.37
SCARB2-223ENST00000640640 C14orf132Q9NPU4 83 aa12.73□□□□□ -0.37
SCARB2-223ENST00000640640 LINC00959A0A1B0GUT2 108 aa12.73□□□□□ -0.37
SCARB2-223ENST00000640640 B5MCH6 92 aa12.73□□□□□ -0.37
SCARB2-223ENST00000640640 FAM236AA0A1B0GUQ0 79 aa12.72□□□□□ -0.37
SCARB2-223ENST00000640640 FAM236BA0A1B0GV22 79 aa12.72□□□□□ -0.37
SCARB2-223ENST00000640640 XAGE1AQ9HD64 81 aa12.72□□□□□ -0.37
SCARB2-223ENST00000640640 COX7BP24311 80 aa12.72□□□□□ -0.37
SCARB2-223ENST00000640640 CD164L2Q6UWJ8 174 aa12.72□□□□□ -0.37
SCARB2-223ENST00000640640 SPATA25Q9BR10 227 aa12.72□□□□□ -0.37
SCARB2-223ENST00000640640 KLK5Q9Y337 293 aaPredicted RBP12.71□□□□□ -0.37
SCARB2-223ENST00000640640 LAMA2P24043 3122 aaKnown RBP12.71□□□□□ -0.37
SCARB2-223ENST00000640640 LINC00242Q5T6M2 205 aa12.71□□□□□ -0.38
SCARB2-223ENST00000640640 POM121L12Q8N7R1 296 aa12.71□□□□□ -0.38
SCARB2-223ENST00000640640 OXLD1Q5BKU9 147 aa12.7□□□□□ -0.38
SCARB2-223ENST00000640640 NREPQ16612 68 aa12.7□□□□□ -0.38
SCARB2-223ENST00000640640 IGLV4-69A0A075B6H9 119 aa12.69□□□□□ -0.38
SCARB2-223ENST00000640640 KPRPQ5T749 579 aaPredicted RBP12.69□□□□□ -0.38
SCARB2-223ENST00000640640 BPTFQ12830 3046 aa12.68□□□□□ -0.38
SCARB2-223ENST00000640640 LELP1Q5T871 98 aa12.68□□□□□ -0.38
SCARB2-223ENST00000640640 IGKV2-24A0A0C4DH68 120 aa12.68□□□□□ -0.38
SCARB2-223ENST00000640640 IGHV4-30-4P0DP06 118 aa12.68□□□□□ -0.38
SCARB2-223ENST00000640640 LINC00526Q96FQ7 95 aa12.67□□□□□ -0.38
SCARB2-223ENST00000640640 LINC00643Q86TS7 51 aa12.67□□□□□ -0.38
SCARB2-223ENST00000640640 CHCHD7Q9BUK0 85 aa12.67□□□□□ -0.38
SCARB2-223ENST00000640640 A0A1B0GX51 115 aa12.66□□□□□ -0.38
SCARB2-223ENST00000640640 C16orf95Q9H693 158 aa12.66□□□□□ -0.38
SCARB2-223ENST00000640640 A0A0C4DFX4 3053 aa12.66□□□□□ -0.38
SCARB2-223ENST00000640640 C6orf99Q4VX62 202 aa12.66□□□□□ -0.38
SCARB2-223ENST00000640640 HECTD1Q9ULT8 2610 aa12.66□□□□□ -0.38
SCARB2-223ENST00000640640 CENPEQ02224 2701 aa12.66□□□□□ -0.38
SCARB2-223ENST00000640640 ATOX1O00244 68 aa12.66□□□□□ -0.38
SCARB2-223ENST00000640640 CLUHP3Q96NS8 147 aa12.66□□□□□ -0.38
SCARB2-223ENST00000640640 PDE6GP18545 87 aa12.65□□□□□ -0.38
SCARB2-223ENST00000640640 SLPIP03973 132 aa12.65□□□□□ -0.38
SCARB2-223ENST00000640640 BEAN1Q3B7T3 259 aa12.65□□□□□ -0.38
SCARB2-223ENST00000640640 UBE2AP49459 152 aa12.65□□□□□ -0.38
SCARB2-223ENST00000640640 PRUNE2Q8WUY3 3088 aa12.64□□□□□ -0.39
SCARB2-223ENST00000640640 F8P00451 2351 aa12.64□□□□□ -0.39
SCARB2-223ENST00000640640 LINC00694P0DN24 101 aa12.64□□□□□ -0.39
SCARB2-223ENST00000640640 KIF25-AS1Q9Y6Z4 181 aa12.64□□□□□ -0.39
SCARB2-223ENST00000640640 SYCNQ0VAF6 134 aa12.63□□□□□ -0.39
SCARB2-223ENST00000640640 TSPEAR-AS2P59090 65 aa12.63□□□□□ -0.39
SCARB2-223ENST00000640640 TRAV10A0A0B4J240 114 aa12.63□□□□□ -0.39
SCARB2-223ENST00000640640 SMIM1B2RUZ4 78 aa12.62□□□□□ -0.39
SCARB2-223ENST00000640640 MT-ATP8P03928 68 aa12.62□□□□□ -0.39
SCARB2-223ENST00000640640 Q6ZSN1 163 aa12.62□□□□□ -0.39
SCARB2-223ENST00000640640 LST1O00453 97 aa12.62□□□□□ -0.39
SCARB2-223ENST00000640640 AMELXQ99217 191 aa12.62□□□□□ -0.39
SCARB2-223ENST00000640640 C14orf177Q52M58 125 aa12.6□□□□□ -0.39
SCARB2-223ENST00000640640 COL27A1Q8IZC6 1860 aaPredicted RBP12.6□□□□□ -0.39
SCARB2-223ENST00000640640 MUC4Q99102 2169 aa12.6□□□□□ -0.39
SCARB2-223ENST00000640640 FHL2Q14192 279 aa12.6□□□□□ -0.39
SCARB2-223ENST00000640640 Q8IZM0 81 aa12.6□□□□□ -0.39
SCARB2-223ENST00000640640 Q8N2B8 174 aa12.59□□□□□ -0.39
SCARB2-223ENST00000640640 CSDC2Q9Y534 153 aaKnown RBP12.59□□□□□ -0.39
SCARB2-223ENST00000640640 IGLV4-60A0A075B6I1 120 aa12.59□□□□□ -0.39
SCARB2-223ENST00000640640 HIGD2AQ9BW72 106 aa12.59□□□□□ -0.39
SCARB2-223ENST00000640640 IL17DQ8TAD2 202 aa12.59□□□□□ -0.39
SCARB2-223ENST00000640640 COX6A2Q02221 97 aa12.58□□□□□ -0.4
SCARB2-223ENST00000640640 PRB2P02812 416 aaPredicted RBP12.57□□□□□ -0.4
SCARB2-223ENST00000640640 SMIM11BQ8TCY0 68 aa12.57□□□□□ -0.4
SCARB2-223ENST00000640640 UNC80Q8N2C7 3258 aa12.55□□□□□ -0.4
SCARB2-223ENST00000640640 SS18L2Q9UHA2 77 aa12.55□□□□□ -0.4
SCARB2-223ENST00000640640 A0A087WZ39 114 aa12.55□□□□□ -0.4
SCARB2-223ENST00000640640 CFAP54Q96N23 3096 aa12.55□□□□□ -0.4
SCARB2-223ENST00000640640 LINC00315P59091 139 aa12.55□□□□□ -0.4
SCARB2-223ENST00000640640 NANOS2P60321 138 aaKnown RBP12.55□□□□□ -0.4
SCARB2-223ENST00000640640 FAM19A4Q96LR4 140 aa12.55□□□□□ -0.4
SCARB2-223ENST00000640640 A0A0J9YWU9 116 aa12.54□□□□□ -0.4
SCARB2-223ENST00000640640 CYSRT1A8MQ03 144 aa12.54□□□□□ -0.4
SCARB2-223ENST00000640640 TRAV23DV6A0A075B6W5 121 aa12.54□□□□□ -0.4
SCARB2-223ENST00000640640 USP24Q9UPU5 2620 aa12.53□□□□□ -0.4
SCARB2-223ENST00000640640 COX17Q14061 63 aa12.53□□□□□ -0.4
SCARB2-223ENST00000640640 Q6ZQY7 126 aa12.53□□□□□ -0.4
SCARB2-223ENST00000640640 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.52□□□□□ -0.4
SCARB2-223ENST00000640640 NDUFS5O43920 106 aa12.52□□□□□ -0.4
SCARB2-223ENST00000640640 NDUFB1O75438 58 aa12.52□□□□□ -0.4
SCARB2-223ENST00000640640 ADAMTSL4-AS1Q5T5F5 129 aa12.52□□□□□ -0.4
SCARB2-223ENST00000640640 C11orf72Q8NBR9 251 aa12.52□□□□□ -0.4
SCARB2-223ENST00000640640 RETNQ9HD89 108 aa12.52□□□□□ -0.41
SCARB2-223ENST00000640640 UNQ6190/PRO20217Q6UXQ8 127 aa12.51□□□□□ -0.41
SCARB2-223ENST00000640640 SDIM1Q6ZPB5 146 aa12.51□□□□□ -0.41
SCARB2-223ENST00000640640 FAM19A5Q7Z5A7 132 aaPredicted RBP12.51□□□□□ -0.41
SCARB2-223ENST00000640640 IGKV2-28A0A075B6P5 120 aa12.5□□□□□ -0.41
SCARB2-223ENST00000640640 IGKV2D-28P01615 120 aa12.5□□□□□ -0.41
SCARB2-223ENST00000640640 NDUFV3P56181 108 aaKnown RBP12.5□□□□□ -0.41
SCARB2-223ENST00000640640 LINC01546A6NGU7 62 aa12.49□□□□□ -0.41
SCARB2-223ENST00000640640 BPY2O14599 106 aa12.49□□□□□ -0.41
SCARB2-223ENST00000640640 FAM19A1Q7Z5A9 133 aa12.49□□□□□ -0.41
SCARB2-223ENST00000640640 ZNF292O60281 2723 aa12.48□□□□□ -0.41
SCARB2-223ENST00000640640 MUC7Q8TAX7 377 aa12.48□□□□□ -0.41
SCARB2-223ENST00000640640 MGAQ8IWI9 3026 aa12.48□□□□□ -0.41
SCARB2-223ENST00000640640 M0R378 163 aa12.48□□□□□ -0.41
SCARB2-223ENST00000640640 KLK9Q2XQG4 91 aa12.48□□□□□ -0.41
SCARB2-223ENST00000640640 B9D2Q9BPU9 175 aa12.48□□□□□ -0.41
SCARB2-223ENST00000640640 TRIOO75962 3097 aa12.47□□□□□ -0.41
SCARB2-223ENST00000640640 Q6ZTC4 211 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms