RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 UBE2D3P61077 147 aa4.25□□□□□ -1.73
RTTN-218ENST00000640408 UBE2D2P62837 147 aa4.25□□□□□ -1.73
RTTN-218ENST00000640408 PIK3CD-AS1Q5SR53 167 aa4.25□□□□□ -1.73
RTTN-218ENST00000640408 C9orf85Q96MD7 179 aa4.25□□□□□ -1.73
RTTN-218ENST00000640408 PYGO1Q9Y3Y4 419 aa4.25□□□□□ -1.73
RTTN-218ENST00000640408 A6NED7 52 aa4.24□□□□□ -1.73
RTTN-218ENST00000640408 MED14OSP0DP75 135 aa4.24□□□□□ -1.73
RTTN-218ENST00000640408 SLURP1P55000 103 aa4.24□□□□□ -1.73
RTTN-218ENST00000640408 TRGV4A0A0C4DH28 118 aa4.24□□□□□ -1.73
RTTN-218ENST00000640408 CFHR3Q02985 330 aa4.24□□□□□ -1.73
RTTN-218ENST00000640408 COX7B2Q8TF08 81 aa4.24□□□□□ -1.73
RTTN-218ENST00000640408 TMEM263Q8WUH6 116 aaKnown RBP4.24□□□□□ -1.73
RTTN-218ENST00000640408 SNURFQ9Y675 71 aa4.24□□□□□ -1.73
RTTN-218ENST00000640408 CHKB-CPT1BH3BT56 60 aa4.24□□□□□ -1.73
RTTN-218ENST00000640408 MIFP14174 115 aa4.24□□□□□ -1.73
RTTN-218ENST00000640408 MGAM2Q2M2H8 2515 aa4.24□□□□□ -1.73
RTTN-218ENST00000640408 A0A0J9YXV3 536 aa4.24□□□□□ -1.73
RTTN-218ENST00000640408 DEFB136Q30KP8 78 aa4.24□□□□□ -1.73
RTTN-218ENST00000640408 RPL39LQ96EH5 51 aaKnown RBP4.24□□□□□ -1.73
RTTN-218ENST00000640408 CCDC140Q96MF4 163 aa4.24□□□□□ -1.73
RTTN-218ENST00000640408 CR1P17927 2039 aa4.23□□□□□ -1.73
RTTN-218ENST00000640408 NSD1Q96L73 2696 aaPredicted RBP4.23□□□□□ -1.73
RTTN-218ENST00000640408 DEFB131AP59861 70 aa4.23□□□□□ -1.73
RTTN-218ENST00000640408 Q9HAA7 133 aa4.23□□□□□ -1.73
RTTN-218ENST00000640408 ZZEF1O43149 2961 aa4.23□□□□□ -1.73
RTTN-218ENST00000640408 WI2-2373I1.2A0A1W2PRP0 233 aa4.23□□□□□ -1.73
RTTN-218ENST00000640408 DEFB114Q30KQ6 69 aa4.23□□□□□ -1.73
RTTN-218ENST00000640408 NDUFB1O75438 58 aa4.23□□□□□ -1.73
RTTN-218ENST00000640408 LINC00482Q8N8I6 264 aa4.23□□□□□ -1.73
RTTN-218ENST00000640408 E7EUB6 86 aa4.23□□□□□ -1.73
RTTN-218ENST00000640408 XCL1P47992 114 aa4.23□□□□□ -1.73
RTTN-218ENST00000640408 TIRAPP58753 221 aa4.23□□□□□ -1.73
RTTN-218ENST00000640408 XCL2Q9UBD3 114 aa4.23□□□□□ -1.73
RTTN-218ENST00000640408 PRB2P02812 416 aaPredicted RBP4.22□□□□□ -1.73
RTTN-218ENST00000640408 PATE2Q6UY27 113 aa4.22□□□□□ -1.73
RTTN-218ENST00000640408 ATMQ13315 3056 aa4.22□□□□□ -1.73
RTTN-218ENST00000640408 TMEM223A0PJW6 202 aa4.22□□□□□ -1.73
RTTN-218ENST00000640408 FHL3Q13643 280 aa4.22□□□□□ -1.73
RTTN-218ENST00000640408 Q6ZS46 218 aa4.22□□□□□ -1.73
RTTN-218ENST00000640408 NBEAQ8NFP9 2946 aa4.22□□□□□ -1.73
RTTN-218ENST00000640408 TRBV7-6A0A0J9YX20 115 aa4.22□□□□□ -1.73
RTTN-218ENST00000640408 PLAC8L1A1L4L8 177 aa4.22□□□□□ -1.73
RTTN-218ENST00000640408 IGHV3-30-3P0DP02 117 aa4.22□□□□□ -1.73
RTTN-218ENST00000640408 MSRB1Q9NZV6 116 aa4.22□□□□□ -1.73
RTTN-218ENST00000640408 TRBV27A0A0K0K1C4 114 aa4.22□□□□□ -1.73
RTTN-218ENST00000640408 IGLV1-51P01701 117 aa4.22□□□□□ -1.73
RTTN-218ENST00000640408 PRR15LQ9BU68 103 aa4.22□□□□□ -1.73
RTTN-218ENST00000640408 COL12A1Q99715 3063 aa4.22□□□□□ -1.73
RTTN-218ENST00000640408 MUC3AQ02505 3323 aa4.21□□□□□ -1.73
RTTN-218ENST00000640408 C17orf77Q96MU5 243 aa4.21□□□□□ -1.74
RTTN-218ENST00000640408 UBE2D1P51668 147 aa4.21□□□□□ -1.74
RTTN-218ENST00000640408 A0A0J9YX75 114 aa4.21□□□□□ -1.74
RTTN-218ENST00000640408 K7EQG2 157 aa4.21□□□□□ -1.74
RTTN-218ENST00000640408 CD164Q04900 197 aa4.21□□□□□ -1.74
RTTN-218ENST00000640408 HIGD2BQ4VC39 106 aa4.21□□□□□ -1.74
RTTN-218ENST00000640408 FAM19A3Q7Z5A8 133 aa4.21□□□□□ -1.74
RTTN-218ENST00000640408 TRGV1A0A0A0MS02 117 aa4.2□□□□□ -1.74
RTTN-218ENST00000640408 SPRY2O43597 315 aa4.2□□□□□ -1.74
RTTN-218ENST00000640408 NHLRC4P0CG21 123 aaPredicted RBP4.2□□□□□ -1.74
RTTN-218ENST00000640408 FAM222AQ5U5X8 452 aa4.2□□□□□ -1.74
RTTN-218ENST00000640408 FREM2Q5SZK8 3169 aa4.2□□□□□ -1.74
RTTN-218ENST00000640408 SOSTDC1Q6X4U4 206 aa4.2□□□□□ -1.74
RTTN-218ENST00000640408 ZFAND3Q9H8U3 227 aa4.2□□□□□ -1.74
RTTN-218ENST00000640408 RNASE13Q5GAN3 156 aaKnown RBP4.2□□□□□ -1.74
RTTN-218ENST00000640408 TEX15Q9BXT5 2789 aa4.2□□□□□ -1.74
RTTN-218ENST00000640408 RPL39P62891 51 aaKnown RBP4.2□□□□□ -1.74
RTTN-218ENST00000640408 BPY2O14599 106 aa4.19□□□□□ -1.74
RTTN-218ENST00000640408 CXCL6P80162 114 aa4.19□□□□□ -1.74
RTTN-218ENST00000640408 OXLD1Q5BKU9 147 aa4.19□□□□□ -1.74
RTTN-218ENST00000640408 C10orf99Q6UWK7 81 aa4.19□□□□□ -1.74
RTTN-218ENST00000640408 ODF3Q96PU9 254 aa4.19□□□□□ -1.74
RTTN-218ENST00000640408 NCR3O14931 201 aa4.19□□□□□ -1.74
RTTN-218ENST00000640408 SERTAD4-AS1Q5TG53 156 aa4.19□□□□□ -1.74
RTTN-218ENST00000640408 URB1-AS1Q96HZ7 61 aa4.19□□□□□ -1.74
RTTN-218ENST00000640408 BCE1O60756 84 aa4.19□□□□□ -1.74
RTTN-218ENST00000640408 UNQ9165/PRO28630Q6UXU0 137 aa4.19□□□□□ -1.74
RTTN-218ENST00000640408 LINC00322Q6ZN03 302 aaPredicted RBP4.19□□□□□ -1.74
RTTN-218ENST00000640408 TET2Q6N021 2002 aaPredicted RBP4.19□□□□□ -1.74
RTTN-218ENST00000640408 PRYO14603 147 aa4.19□□□□□ -1.74
RTTN-218ENST00000640408 CCKP06307 115 aa4.19□□□□□ -1.74
RTTN-218ENST00000640408 MRGPRG-AS1Q2M3A8 158 aa4.19□□□□□ -1.74
RTTN-218ENST00000640408 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.18□□□□□ -1.74
RTTN-218ENST00000640408 IGKV1D-37A0A075B6S9 117 aa4.18□□□□□ -1.74
RTTN-218ENST00000640408 IGKV2-29A2NJV5 120 aaPredicted RBP4.18□□□□□ -1.74
RTTN-218ENST00000640408 ZNF22P17026 224 aaPredicted RBP4.18□□□□□ -1.74
RTTN-218ENST00000640408 PRO0461Q9UI25 63 aa4.18□□□□□ -1.74
RTTN-218ENST00000640408 UTP20O75691 2785 aaKnown RBP4.18□□□□□ -1.74
RTTN-218ENST00000640408 CASC2Q6XLA1 102 aa4.18□□□□□ -1.74
RTTN-218ENST00000640408 NKAPP1Q8N9T2 125 aa4.18□□□□□ -1.74
RTTN-218ENST00000640408 NDUFA1O15239 70 aa4.18□□□□□ -1.74
RTTN-218ENST00000640408 C20orf203Q8NBC4 194 aa4.18□□□□□ -1.74
RTTN-218ENST00000640408 LINC00308Q8TCZ7 52 aa4.18□□□□□ -1.74
RTTN-218ENST00000640408 HHLA3Q9XRX5 114 aa4.18□□□□□ -1.74
RTTN-218ENST00000640408 ESRGQ1W209 222 aa4.18□□□□□ -1.74
RTTN-218ENST00000640408 IGHV3-38A0A0C4DH36 116 aa4.17□□□□□ -1.74
RTTN-218ENST00000640408 GNRH2O43555 120 aa4.17□□□□□ -1.74
RTTN-218ENST00000640408 IGKV1OR2-108A0A075B7D4 117 aa4.17□□□□□ -1.74
RTTN-218ENST00000640408 A8MZ25 164 aa4.17□□□□□ -1.74
RTTN-218ENST00000640408 C9orf47Q6ZRZ4 202 aa4.17□□□□□ -1.74
RTTN-218ENST00000640408 RNF185Q96GF1 192 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms