RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	ZNF22	P17026	224 aa	Predicted RBP	7.15	□□□□□ -1.26
NECAP1-223	ENST00000640091	PCP2	Q8IVA1	136 aa		7.15	□□□□□ -1.26
NECAP1-223	ENST00000640091	LINC00269	Q8N2A0	174 aa		7.15	□□□□□ -1.26
NECAP1-223	ENST00000640091	CSMD3	Q7Z407	3707 aa		7.15	□□□□□ -1.27
NECAP1-223	ENST00000640091	TRAV8-6	A0A0B4J262	113 aa		7.15	□□□□□ -1.27
NECAP1-223	ENST00000640091	TINCR	A0A1B0GVN0	87 aa		7.15	□□□□□ -1.27
NECAP1-223	ENST00000640091	IGHV3-30	P01768	117 aa		7.15	□□□□□ -1.27
NECAP1-223	ENST00000640091	IGHV3-33	P01772	117 aa		7.15	□□□□□ -1.27
NECAP1-223	ENST00000640091	IGHV3-30-3	P0DP02	117 aa		7.15	□□□□□ -1.27
NECAP1-223	ENST00000640091	IGHV3-30-5	P0DP03	117 aa		7.15	□□□□□ -1.27
NECAP1-223	ENST00000640091	GEMIN7	Q9H840	131 aa	Known RBP	7.15	□□□□□ -1.27
NECAP1-223	ENST00000640091	C15orf53	Q8NAA6	179 aa		7.14	□□□□□ -1.27
NECAP1-223	ENST00000640091	CDKN2A-AS1	Q9UH64	79 aa		7.14	□□□□□ -1.27
NECAP1-223	ENST00000640091	TIRAP	P58753	221 aa		7.13	□□□□□ -1.27
NECAP1-223	ENST00000640091	KLK12	Q9UKR0	248 aa		7.13	□□□□□ -1.27
NECAP1-223	ENST00000640091	LYST	Q99698	3801 aa		7.13	□□□□□ -1.27
NECAP1-223	ENST00000640091	TRAV8-3	A0A0A6YYJ7	113 aa		7.12	□□□□□ -1.27
NECAP1-223	ENST00000640091	LINC00959	A0A1B0GUT2	108 aa		7.12	□□□□□ -1.27
NECAP1-223	ENST00000640091	TMEM223	A0PJW6	202 aa		7.12	□□□□□ -1.27
NECAP1-223	ENST00000640091	COX8A	P10176	69 aa		7.12	□□□□□ -1.27
NECAP1-223	ENST00000640091	LINC00588	Q9Y4M8	146 aa		7.12	□□□□□ -1.27
NECAP1-223	ENST00000640091	IGLV10-54	A0A075B6I4	117 aa		7.12	□□□□□ -1.27
NECAP1-223	ENST00000640091		E9PLD3	99 aa		7.12	□□□□□ -1.27
NECAP1-223	ENST00000640091	SPINK8	P0C7L1	97 aa		7.12	□□□□□ -1.27
NECAP1-223	ENST00000640091	REG3A	Q06141	175 aa		7.12	□□□□□ -1.27
NECAP1-223	ENST00000640091	SLC25A34	Q6PIV7	304 aa		7.12	□□□□□ -1.27
NECAP1-223	ENST00000640091	MAPKAPK5-AS1	Q8N8E1	139 aa		7.12	□□□□□ -1.27
NECAP1-223	ENST00000640091	SCGB1A1	P11684	91 aa		7.11	□□□□□ -1.27
NECAP1-223	ENST00000640091	XCL1	P47992	114 aa		7.11	□□□□□ -1.27
NECAP1-223	ENST00000640091	HERVK_113	P63121	156 aa		7.11	□□□□□ -1.27
NECAP1-223	ENST00000640091	CCL18	P55774	89 aa		7.1	□□□□□ -1.27
NECAP1-223	ENST00000640091	HERVK_113	P61574	105 aa		7.1	□□□□□ -1.27
NECAP1-223	ENST00000640091	SEC11A	P67812	179 aa		7.1	□□□□□ -1.27
NECAP1-223	ENST00000640091	FAM19A3	Q7Z5A8	133 aa		7.1	□□□□□ -1.27
NECAP1-223	ENST00000640091	TG	P01266	2768 aa		7.1	□□□□□ -1.27
NECAP1-223	ENST00000640091	IGLV5-45	A0A087WSX0	123 aa		7.1	□□□□□ -1.27
NECAP1-223	ENST00000640091	TSPEAR-AS2	P59090	65 aa		7.1	□□□□□ -1.27
NECAP1-223	ENST00000640091	BOD1L2	Q8IYS8	172 aa		7.1	□□□□□ -1.27
NECAP1-223	ENST00000640091	TENM2	Q9NT68	2774 aa		7.1	□□□□□ -1.27
NECAP1-223	ENST00000640091	SS18	Q15532	418 aa		7.09	□□□□□ -1.27
NECAP1-223	ENST00000640091	ENHO	Q6UWT2	76 aa		7.09	□□□□□ -1.27
NECAP1-223	ENST00000640091	C5orf38	Q86SI9	138 aa		7.09	□□□□□ -1.27
NECAP1-223	ENST00000640091	APLN	Q9ULZ1	77 aa		7.09	□□□□□ -1.27
NECAP1-223	ENST00000640091	IGHV3OR16-9	A0A0B4J2B5	98 aa		7.09	□□□□□ -1.28
NECAP1-223	ENST00000640091	UBE2W	Q96B02	151 aa		7.09	□□□□□ -1.28
NECAP1-223	ENST00000640091	IGHV1-58	A0A0C4DH39	117 aa		7.08	□□□□□ -1.28
NECAP1-223	ENST00000640091		H3BRM9	83 aa		7.08	□□□□□ -1.28
NECAP1-223	ENST00000640091		J3QQQ9	107 aa		7.08	□□□□□ -1.28
NECAP1-223	ENST00000640091	ZFAND6	Q6FIF0	208 aa		7.08	□□□□□ -1.28
NECAP1-223	ENST00000640091	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	7.08	□□□□□ -1.28
NECAP1-223	ENST00000640091	LEPROT	O15243	131 aa		7.07	□□□□□ -1.28
NECAP1-223	ENST00000640091	PRR34	Q9NV39	138 aa		7.07	□□□□□ -1.28
NECAP1-223	ENST00000640091	NUPR2	A6NF83	97 aa		7.07	□□□□□ -1.28
NECAP1-223	ENST00000640091	GAGE10	A6NGK3	116 aa		7.07	□□□□□ -1.28
NECAP1-223	ENST00000640091	ZNF815P	A8K554	130 aa		7.07	□□□□□ -1.28
NECAP1-223	ENST00000640091	SMIM1	B2RUZ4	78 aa		7.07	□□□□□ -1.28
NECAP1-223	ENST00000640091	SIVA1	O15304	175 aa		7.07	□□□□□ -1.28
NECAP1-223	ENST00000640091	LINC01556	Q5JQF7	62 aa		7.07	□□□□□ -1.28
NECAP1-223	ENST00000640091	C2orf91	Q6ZV80	131 aa		7.07	□□□□□ -1.28
NECAP1-223	ENST00000640091	GTF2H5	Q6ZYL4	71 aa		7.07	□□□□□ -1.28
NECAP1-223	ENST00000640091	MYMX	A0A1B0GTQ4	84 aa		7.06	□□□□□ -1.28
NECAP1-223	ENST00000640091		K7EP34	96 aa		7.06	□□□□□ -1.28
NECAP1-223	ENST00000640091	CRP	P02741	224 aa		7.06	□□□□□ -1.28
NECAP1-223	ENST00000640091	LGALS3	P17931	250 aa	Known RBP	7.06	□□□□□ -1.28
NECAP1-223	ENST00000640091		Q9H8V8	135 aa		7.06	□□□□□ -1.28
NECAP1-223	ENST00000640091	KLK5	Q9Y337	293 aa	Predicted RBP	7.06	□□□□□ -1.28
NECAP1-223	ENST00000640091	PLEC	Q15149	4684 aa	Known RBP	7.06	□□□□□ -1.28
NECAP1-223	ENST00000640091	DNAH10OS	P0CZ25	163 aa		7.06	□□□□□ -1.28
NECAP1-223	ENST00000640091	DNAH7	Q8WXX0	4024 aa		7.06	□□□□□ -1.28
NECAP1-223	ENST00000640091	STARD9	Q9P2P6	4700 aa		7.05	□□□□□ -1.28
NECAP1-223	ENST00000640091		A0A087WZ39	114 aa		7.05	□□□□□ -1.28
NECAP1-223	ENST00000640091	C9orf118	A6NHY6	69 aa		7.05	□□□□□ -1.28
NECAP1-223	ENST00000640091	CD164L2	Q6UWJ8	174 aa		7.05	□□□□□ -1.28
NECAP1-223	ENST00000640091	PLEKHB2	Q96CS7	222 aa		7.05	□□□□□ -1.28
NECAP1-223	ENST00000640091	GAGE12H	A6NDE8	117 aa		7.04	□□□□□ -1.28
NECAP1-223	ENST00000640091	TOMM7	Q9P0U1	55 aa		7.04	□□□□□ -1.28
NECAP1-223	ENST00000640091	DYNC2H1	Q8NCM8	4307 aa	Known RBP	7.04	□□□□□ -1.28
NECAP1-223	ENST00000640091	IGLV5-39	A0A0G2JS06	123 aa		7.04	□□□□□ -1.28
NECAP1-223	ENST00000640091	SCGB1D4	Q6XE38	83 aa		7.04	□□□□□ -1.28
NECAP1-223	ENST00000640091	UBE2DNL	Q8IWF7	75 aa		7.04	□□□□□ -1.28
NECAP1-223	ENST00000640091		Q9HAA7	133 aa		7.04	□□□□□ -1.28
NECAP1-223	ENST00000640091		A0A1B0GV72	72 aa		7.03	□□□□□ -1.28
NECAP1-223	ENST00000640091	FOXI1	Q12951	378 aa		7.03	□□□□□ -1.28
NECAP1-223	ENST00000640091	UPK3B	Q9BT76	320 aa		7.03	□□□□□ -1.28
NECAP1-223	ENST00000640091	NDUFA12	Q9UI09	145 aa		7.03	□□□□□ -1.28
NECAP1-223	ENST00000640091	COX7A2L	O14548	114 aa		7.03	□□□□□ -1.28
NECAP1-223	ENST00000640091	MIA	Q16674	131 aa		7.03	□□□□□ -1.28
NECAP1-223	ENST00000640091	MAL	P21145	153 aa		7.02	□□□□□ -1.29
NECAP1-223	ENST00000640091	C10orf126	Q8N4M7	172 aa		7.02	□□□□□ -1.29
NECAP1-223	ENST00000640091	ZNF625	Q96I27	306 aa	Predicted RBP	7.02	□□□□□ -1.29
NECAP1-223	ENST00000640091	TRAV8-4	A0A0B4J246	113 aa		7.01	□□□□□ -1.29
NECAP1-223	ENST00000640091	IGKV2D-24	A0A075B6R9	120 aa		7.01	□□□□□ -1.29
NECAP1-223	ENST00000640091	LCE2D	Q5TA82	110 aa	Predicted RBP	7.01	□□□□□ -1.29
NECAP1-223	ENST00000640091	MUC7	Q8TAX7	377 aa		7.01	□□□□□ -1.29
NECAP1-223	ENST00000640091	COX7B2	Q8TF08	81 aa		7.01	□□□□□ -1.29
NECAP1-223	ENST00000640091		A6NDN8	102 aa		7	□□□□□ -1.29
NECAP1-223	ENST00000640091	IBA57-AS1	B1ANH7	110 aa		7	□□□□□ -1.29
NECAP1-223	ENST00000640091		A0A0J9YXY3	114 aa		7	□□□□□ -1.29
NECAP1-223	ENST00000640091	C6orf226	Q5I0X4	101 aa		7	□□□□□ -1.29
NECAP1-223	ENST00000640091	KRTAP26-1	Q6PEX3	210 aa		7	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms