RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	IGHV3-49	A0A0A0MS15	119 aa		4.26	□□□□□ -1.73
NECAP1-222	ENST00000640072	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.26	□□□□□ -1.73
NECAP1-222	ENST00000640072	ODF3L2	Q3SX64	289 aa		4.26	□□□□□ -1.73
NECAP1-222	ENST00000640072	PSCA	O43653	123 aa		4.26	□□□□□ -1.73
NECAP1-222	ENST00000640072	C9orf66	Q5T8R8	295 aa		4.26	□□□□□ -1.73
NECAP1-222	ENST00000640072	ZNF575	Q86XF7	245 aa		4.26	□□□□□ -1.73
NECAP1-222	ENST00000640072	TOMM7	Q9P0U1	55 aa		4.26	□□□□□ -1.73
NECAP1-222	ENST00000640072	TFF2	Q03403	129 aa		4.25	□□□□□ -1.73
NECAP1-222	ENST00000640072		K7EIM0	57 aa		4.25	□□□□□ -1.73
NECAP1-222	ENST00000640072	CGB3	P0DN86	165 aa		4.25	□□□□□ -1.73
NECAP1-222	ENST00000640072	CGB7	P0DN87	165 aa		4.25	□□□□□ -1.73
NECAP1-222	ENST00000640072	CCL3L1	P16619	93 aa		4.25	□□□□□ -1.73
NECAP1-222	ENST00000640072	DEFB133	Q30KQ1	61 aa		4.25	□□□□□ -1.73
NECAP1-222	ENST00000640072	C9orf47	Q6ZRZ4	202 aa		4.25	□□□□□ -1.73
NECAP1-222	ENST00000640072	MAP1B	P46821	2468 aa	Known RBP	4.25	□□□□□ -1.73
NECAP1-222	ENST00000640072	IGLV1-51	P01701	117 aa		4.25	□□□□□ -1.73
NECAP1-222	ENST00000640072	CTSG	P08311	255 aa		4.25	□□□□□ -1.73
NECAP1-222	ENST00000640072	IGLV2-23	P01705	113 aa		4.24	□□□□□ -1.73
NECAP1-222	ENST00000640072	COX7B2	Q8TF08	81 aa		4.24	□□□□□ -1.73
NECAP1-222	ENST00000640072	IGLV5-45	A0A087WSX0	123 aa		4.23	□□□□□ -1.73
NECAP1-222	ENST00000640072	TRBV6-5	A0A0K0K1A5	114 aa		4.23	□□□□□ -1.73
NECAP1-222	ENST00000640072	ROS1	P08922	2347 aa		4.23	□□□□□ -1.73
NECAP1-222	ENST00000640072	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	4.23	□□□□□ -1.73	9e-7	■■■■■ 30.3
NECAP1-222	ENST00000640072	COL4A2	P08572	1712 aa		4.23	□□□□□ -1.73
NECAP1-222	ENST00000640072	SPTY2D1-AS1	A0A0U1RR47	76 aa		4.23	□□□□□ -1.73
NECAP1-222	ENST00000640072	IGKV3D-15	A0A087WSY6	115 aa		4.23	□□□□□ -1.73
NECAP1-222	ENST00000640072	IGHV3-38	A0A0C4DH36	116 aa		4.23	□□□□□ -1.73
NECAP1-222	ENST00000640072	IGKV3-15	P01624	115 aa		4.23	□□□□□ -1.73
NECAP1-222	ENST00000640072	CCL5	P13501	91 aa		4.23	□□□□□ -1.73
NECAP1-222	ENST00000640072	PDE6G	P18545	87 aa		4.23	□□□□□ -1.73
NECAP1-222	ENST00000640072	LUZP6	Q538Z0	58 aa		4.23	□□□□□ -1.73
NECAP1-222	ENST00000640072	KLK9	Q9UKQ9	250 aa		4.23	□□□□□ -1.73
NECAP1-222	ENST00000640072	NTM-AS1	Q6ZSK4	140 aa		4.22	□□□□□ -1.73
NECAP1-222	ENST00000640072	LENEP	Q9Y5L5	61 aa		4.22	□□□□□ -1.73
NECAP1-222	ENST00000640072	TECTA	O75443	2155 aa		4.22	□□□□□ -1.73
NECAP1-222	ENST00000640072	CACNA1B	Q00975	2339 aa		4.22	□□□□□ -1.73
NECAP1-222	ENST00000640072	RPL37AP8	A6NKH3	93 aa		4.22	□□□□□ -1.73
NECAP1-222	ENST00000640072	IGKV3-7	A0A075B6H7	116 aa		4.21	□□□□□ -1.74
NECAP1-222	ENST00000640072	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.21	□□□□□ -1.74
NECAP1-222	ENST00000640072	ROMO1	P60602	79 aa		4.21	□□□□□ -1.74
NECAP1-222	ENST00000640072	B9D2	Q9BPU9	175 aa		4.21	□□□□□ -1.74
NECAP1-222	ENST00000640072	IGHV4-28	A0A0C4DH34	117 aa		4.21	□□□□□ -1.74
NECAP1-222	ENST00000640072	IGHV4-61	A0A0C4DH41	118 aa		4.21	□□□□□ -1.74
NECAP1-222	ENST00000640072	IGHV4-59	P01825	116 aa		4.21	□□□□□ -1.74
NECAP1-222	ENST00000640072	PRR9	Q5T870	116 aa		4.21	□□□□□ -1.74
NECAP1-222	ENST00000640072	IGHV4-30-4	P0DP06	118 aa		4.2	□□□□□ -1.74
NECAP1-222	ENST00000640072	LPAL2	Q16609	132 aa		4.2	□□□□□ -1.74
NECAP1-222	ENST00000640072	MUC22	E2RYF6	1773 aa	Predicted RBP	4.2	□□□□□ -1.74
NECAP1-222	ENST00000640072		K7ERS5	55 aa		4.2	□□□□□ -1.74
NECAP1-222	ENST00000640072	RNASE3	P12724	160 aa	Known RBP	4.2	□□□□□ -1.74
NECAP1-222	ENST00000640072	CLPSL1	A2RUU4	121 aa		4.2	□□□□□ -1.74
NECAP1-222	ENST00000640072		M0QY20	66 aa		4.2	□□□□□ -1.74
NECAP1-222	ENST00000640072	ASB16-AS1	Q495Z4	193 aa		4.2	□□□□□ -1.74
NECAP1-222	ENST00000640072		Q6ZQT0	140 aa		4.2	□□□□□ -1.74
NECAP1-222	ENST00000640072		Q8N9L7	120 aa		4.2	□□□□□ -1.74
NECAP1-222	ENST00000640072	LINC01560	Q8TB33	94 aa		4.2	□□□□□ -1.74
NECAP1-222	ENST00000640072	CDC42SE2	Q9NRR3	84 aa		4.2	□□□□□ -1.74
NECAP1-222	ENST00000640072	AKAP6	Q13023	2319 aa		4.2	□□□□□ -1.74
NECAP1-222	ENST00000640072	PCNX1	Q96RV3	2341 aa		4.2	□□□□□ -1.74
NECAP1-222	ENST00000640072	IGHV3-73	A0A0B4J1V6	119 aa		4.19	□□□□□ -1.74
NECAP1-222	ENST00000640072	PATE3	B3GLJ2	98 aa		4.19	□□□□□ -1.74
NECAP1-222	ENST00000640072	NDUFB1	O75438	58 aa		4.19	□□□□□ -1.74
NECAP1-222	ENST00000640072	LINC00315	P59091	139 aa		4.19	□□□□□ -1.74
NECAP1-222	ENST00000640072	MRPS21	P82921	87 aa	Known RBP	4.19	□□□□□ -1.74
NECAP1-222	ENST00000640072	CEP290	O15078	2479 aa		4.19	□□□□□ -1.74
NECAP1-222	ENST00000640072	IGHV1-3	A0A0C4DH29	117 aa		4.19	□□□□□ -1.74
NECAP1-222	ENST00000640072	LOC101927531	A0A1B0GV80	90 aa		4.19	□□□□□ -1.74
NECAP1-222	ENST00000640072	MIR22HG	Q0VDD5	57 aa		4.19	□□□□□ -1.74
NECAP1-222	ENST00000640072	GAFA1	Q96PS6	74 aa		4.19	□□□□□ -1.74
NECAP1-222	ENST00000640072	GVINP1	Q7Z2Y8	2422 aa		4.19	□□□□□ -1.74
NECAP1-222	ENST00000640072		A0A1B0GW54	56 aa		4.18	□□□□□ -1.74
NECAP1-222	ENST00000640072		F8W735	103 aa	Predicted RBP	4.18	□□□□□ -1.74
NECAP1-222	ENST00000640072	CSAG1	Q6PB30	78 aa		4.18	□□□□□ -1.74
NECAP1-222	ENST00000640072	ZFAND2A	Q8N6M9	145 aa		4.18	□□□□□ -1.74
NECAP1-222	ENST00000640072		Q8N9P0	234 aa	Predicted RBP	4.18	□□□□□ -1.74
NECAP1-222	ENST00000640072	XAGE1A	Q9HD64	81 aa		4.18	□□□□□ -1.74
NECAP1-222	ENST00000640072	C8orf17	Q9NRJ1	99 aa		4.18	□□□□□ -1.74
NECAP1-222	ENST00000640072	COL6A6	A6NMZ7	2263 aa		4.18	□□□□□ -1.74
NECAP1-222	ENST00000640072	CCL18	P55774	89 aa		4.18	□□□□□ -1.74
NECAP1-222	ENST00000640072	DEFB119	Q8N690	84 aa		4.18	□□□□□ -1.74
NECAP1-222	ENST00000640072	LINC00208	Q96KT6	92 aa		4.18	□□□□□ -1.74
NECAP1-222	ENST00000640072	OCR1	Q9BZK8	76 aa		4.18	□□□□□ -1.74
NECAP1-222	ENST00000640072	CEP350	Q5VT06	3117 aa		4.17	□□□□□ -1.74
NECAP1-222	ENST00000640072	IGKV2-28	A0A075B6P5	120 aa		4.17	□□□□□ -1.74
NECAP1-222	ENST00000640072	IGKV2D-28	P01615	120 aa		4.17	□□□□□ -1.74
NECAP1-222	ENST00000640072	HTN1	P15515	57 aa		4.17	□□□□□ -1.74
NECAP1-222	ENST00000640072	BRCA2	P51587	3418 aa		4.17	□□□□□ -1.74
NECAP1-222	ENST00000640072	IGKV3OR2-268	A0A0C4DH90	116 aa		4.17	□□□□□ -1.74
NECAP1-222	ENST00000640072	IGHV7-81	A0A0B4J1V7	117 aa		4.16	□□□□□ -1.74
NECAP1-222	ENST00000640072	C2CD3	Q4AC94	2353 aa		4.16	□□□□□ -1.74
NECAP1-222	ENST00000640072	SPAG11B	Q08648	103 aa		4.16	□□□□□ -1.74
NECAP1-222	ENST00000640072	SPAG11A	Q6PDA7	123 aa		4.16	□□□□□ -1.74
NECAP1-222	ENST00000640072	LINC01006	Q8NI28	216 aa		4.16	□□□□□ -1.74
NECAP1-222	ENST00000640072	DEFB1	P60022	68 aa		4.16	□□□□□ -1.74
NECAP1-222	ENST00000640072	SPTBN2	O15020	2390 aa		4.15	□□□□□ -1.74
NECAP1-222	ENST00000640072	LOC110117498	A0A087WWA1	95 aa		4.15	□□□□□ -1.74
NECAP1-222	ENST00000640072	IGLV5-39	A0A0G2JS06	123 aa		4.15	□□□□□ -1.74
NECAP1-222	ENST00000640072		A8MWP4	228 aa		4.15	□□□□□ -1.74
NECAP1-222	ENST00000640072	SMIM1	B2RUZ4	78 aa		4.15	□□□□□ -1.74
NECAP1-222	ENST00000640072		M0R2N4	97 aa		4.15	□□□□□ -1.74

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