RNA–Protein interactions for RNA: ENST00000639943.1

PAX6-261, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-261ENST00000639943 PLEKHB2Q96CS7 222 aa8.62□□□□□ -1.03
PAX6-261ENST00000639943 HIST1H4GQ99525 98 aa8.62□□□□□ -1.03
PAX6-261ENST00000639943 Q8NAQ8 132 aa8.61□□□□□ -1.03
PAX6-261ENST00000639943 PRO0255Q9UI72 69 aa8.61□□□□□ -1.03
PAX6-261ENST00000639943 TSPEAR-AS2P59090 65 aa8.61□□□□□ -1.03
PAX6-261ENST00000639943 EGFEM1PQ0D2K5 195 aa8.61□□□□□ -1.03
PAX6-261ENST00000639943 C6orf226Q5I0X4 101 aa8.61□□□□□ -1.03
PAX6-261ENST00000639943 TMEM101Q96IK0 257 aa8.61□□□□□ -1.03
PAX6-261ENST00000639943 H3BRM9 83 aa8.6□□□□□ -1.03
PAX6-261ENST00000639943 FXYD2P54710 66 aa8.6□□□□□ -1.03
PAX6-261ENST00000639943 KRTAP10-11P60412 298 aa8.6□□□□□ -1.03
PAX6-261ENST00000639943 NBEAL2Q6ZNJ1 2754 aa8.6□□□□□ -1.03
PAX6-261ENST00000639943 TRBV6-8A0A0A6YYG3 113 aa8.6□□□□□ -1.03
PAX6-261ENST00000639943 DEFB4AO15263 64 aa8.6□□□□□ -1.03
PAX6-261ENST00000639943 GYPEP15421 78 aa8.6□□□□□ -1.03
PAX6-261ENST00000639943 DAD1P61803 113 aa8.6□□□□□ -1.03
PAX6-261ENST00000639943 CDC42SE2Q9NRR3 84 aa8.6□□□□□ -1.03
PAX6-261ENST00000639943 NAA38Q9BRA0 125 aaKnown RBP8.59□□□□□ -1.03
PAX6-261ENST00000639943 A8MZ25 164 aa8.59□□□□□ -1.03
PAX6-261ENST00000639943 FAM19A5Q7Z5A7 132 aaPredicted RBP8.59□□□□□ -1.03
PAX6-261ENST00000639943 FAM19A3Q7Z5A8 133 aa8.59□□□□□ -1.03
PAX6-261ENST00000639943 IGHV1-58A0A0C4DH39 117 aa8.58□□□□□ -1.04
PAX6-261ENST00000639943 J3KT08 172 aa8.58□□□□□ -1.04
PAX6-261ENST00000639943 SMIM13P0DJ93 91 aa8.58□□□□□ -1.04
PAX6-261ENST00000639943 ATP6V0E2Q8NHE4 81 aa8.58□□□□□ -1.04
PAX6-261ENST00000639943 SPANXCQ9NY87 97 aa8.58□□□□□ -1.04
PAX6-261ENST00000639943 FBN1P35555 2871 aaKnown RBP8.58□□□□□ -1.04
PAX6-261ENST00000639943 IGHV3-64A0A075B6Q5 118 aa8.58□□□□□ -1.04
PAX6-261ENST00000639943 IGLV5-45A0A087WSX0 123 aa8.58□□□□□ -1.04
PAX6-261ENST00000639943 A0A0J9YY99 117 aa8.58□□□□□ -1.04
PAX6-261ENST00000639943 PAX4O43316 350 aa8.58□□□□□ -1.04
PAX6-261ENST00000639943 SPART-AS1P0CW21 52 aa8.58□□□□□ -1.04
PAX6-261ENST00000639943 HERVK_113P63121 156 aa8.58□□□□□ -1.04
PAX6-261ENST00000639943 NHLRC4P0CG21 123 aaPredicted RBP8.57□□□□□ -1.04
PAX6-261ENST00000639943 IGHV3-30-3P0DP02 117 aa8.57□□□□□ -1.04
PAX6-261ENST00000639943 STAB1Q9NY15 2570 aa8.57□□□□□ -1.04
PAX6-261ENST00000639943 C9orf118A6NHY6 69 aa8.57□□□□□ -1.04
PAX6-261ENST00000639943 SRSF9Q13242 221 aaKnown RBP eCLIP8.57□□□□□ -1.04
PAX6-261ENST00000639943 A0A1B0GX51 115 aa8.56□□□□□ -1.04
PAX6-261ENST00000639943 ATP5G1P05496 136 aa8.56□□□□□ -1.04
PAX6-261ENST00000639943 LINC00242Q5T6M2 205 aa8.56□□□□□ -1.04
PAX6-261ENST00000639943 VSIG2Q96IQ7 327 aa8.56□□□□□ -1.04
PAX6-261ENST00000639943 CHCHD5Q9BSY4 110 aa8.56□□□□□ -1.04
PAX6-261ENST00000639943 SPANXB1Q9NS25 103 aaPredicted RBP8.56□□□□□ -1.04
PAX6-261ENST00000639943 CELA1Q9UNI1 258 aa8.56□□□□□ -1.04
PAX6-261ENST00000639943 CMYA5Q8N3K9 4069 aa8.56□□□□□ -1.04
PAX6-261ENST00000639943 CDKN2A-AS1Q9UH64 79 aa8.56□□□□□ -1.04
PAX6-261ENST00000639943 TRAV8-3A0A0A6YYJ7 113 aa8.55□□□□□ -1.04
PAX6-261ENST00000639943 TRAV13-1A0A0B4J241 112 aa8.55□□□□□ -1.04
PAX6-261ENST00000639943 CCDC179H3BU77 68 aa8.55□□□□□ -1.04
PAX6-261ENST00000639943 NHP2Q9NX24 153 aaKnown RBP8.55□□□□□ -1.04
PAX6-261ENST00000639943 COX6A2Q02221 97 aa8.55□□□□□ -1.04
PAX6-261ENST00000639943 RPS28P62857 69 aaKnown RBP8.54□□□□□ -1.04
PAX6-261ENST00000639943 RAB37Q96AX2 223 aa8.54□□□□□ -1.04
PAX6-261ENST00000639943 PRO0628Q9UI54 55 aa8.54□□□□□ -1.04
PAX6-261ENST00000639943 C12orf74Q32Q52 190 aa8.53□□□□□ -1.04
PAX6-261ENST00000639943 C9JAW5 83 aa8.52□□□□□ -1.05
PAX6-261ENST00000639943 H3BUT2 72 aa8.52□□□□□ -1.05
PAX6-261ENST00000639943 C10orf126Q8N4M7 172 aa8.52□□□□□ -1.05
PAX6-261ENST00000639943 NDUFA12Q9UI09 145 aa8.52□□□□□ -1.05
PAX6-261ENST00000639943 IGLV4-60A0A075B6I1 120 aa8.52□□□□□ -1.05
PAX6-261ENST00000639943 A0A0J9YXY3 114 aa8.52□□□□□ -1.05
PAX6-261ENST00000639943 A0A1B0GWB2 263 aa8.52□□□□□ -1.05
PAX6-261ENST00000639943 K7ERJ3 54 aa8.52□□□□□ -1.05
PAX6-261ENST00000639943 IGLV5-39A0A0G2JS06 123 aa8.51□□□□□ -1.05
PAX6-261ENST00000639943 F8W1H4 67 aa8.51□□□□□ -1.05
PAX6-261ENST00000639943 IGHV3-30P01768 117 aa8.51□□□□□ -1.05
PAX6-261ENST00000639943 IGHV3-30-5P0DP03 117 aa8.51□□□□□ -1.05
PAX6-261ENST00000639943 MEIG1Q5JSS6 88 aa8.51□□□□□ -1.05
PAX6-261ENST00000639943 SPCS1Q9Y6A9 102 aa8.51□□□□□ -1.05
PAX6-261ENST00000639943 A0A1B0GUV1 79 aa8.51□□□□□ -1.05
PAX6-261ENST00000639943 A0A096LPF7 62 aa8.5□□□□□ -1.05
PAX6-261ENST00000639943 MT-ATP8P03928 68 aa8.5□□□□□ -1.05
PAX6-261ENST00000639943 NDUFV3P56181 108 aaKnown RBP8.5□□□□□ -1.05
PAX6-261ENST00000639943 TMEM262E9PQX1 116 aa8.5□□□□□ -1.05
PAX6-261ENST00000639943 HTN3P15516 51 aa8.5□□□□□ -1.05
PAX6-261ENST00000639943 SH2D6Q7Z4S9 175 aa8.5□□□□□ -1.05
PAX6-261ENST00000639943 A0A1W2PPM0 123 aa8.49□□□□□ -1.05
PAX6-261ENST00000639943 SMIM1B2RUZ4 78 aa8.49□□□□□ -1.05
PAX6-261ENST00000639943 RETNQ9HD89 108 aa8.49□□□□□ -1.05
PAX6-261ENST00000639943 NDUFA1O15239 70 aa8.49□□□□□ -1.05
PAX6-261ENST00000639943 COL6A5A8TX70 2615 aa8.48□□□□□ -1.05
PAX6-261ENST00000639943 ICOSQ9Y6W8 199 aa8.48□□□□□ -1.05
PAX6-261ENST00000639943 DNAH3Q8TD57 4116 aa8.48□□□□□ -1.05
PAX6-261ENST00000639943 PKD1L1Q8TDX9 2849 aa8.48□□□□□ -1.05
PAX6-261ENST00000639943 IGKV3OR2-268A0A0C4DH90 116 aa8.48□□□□□ -1.05
PAX6-261ENST00000639943 EIF4EBP3O60516 100 aaPredicted RBP8.48□□□□□ -1.05
PAX6-261ENST00000639943 FABP2P12104 132 aa8.48□□□□□ -1.05
PAX6-261ENST00000639943 C11orf68Q9H3H3 251 aaKnown RBP8.48□□□□□ -1.05
PAX6-261ENST00000639943 IGLL5B9A064 214 aa8.47□□□□□ -1.05
PAX6-261ENST00000639943 TIMM17BO60830 172 aa8.47□□□□□ -1.05
PAX6-261ENST00000639943 LITAFQ99732 161 aa8.47□□□□□ -1.05
PAX6-261ENST00000639943 LOC107984640A0A0U1RRK4 108 aa8.46□□□□□ -1.05
PAX6-261ENST00000639943 SPANXDQ9BXN6 97 aa8.46□□□□□ -1.05
PAX6-261ENST00000639943 LINC00959A0A1B0GUT2 108 aa8.46□□□□□ -1.06
PAX6-261ENST00000639943 IFITM1P13164 125 aa8.46□□□□□ -1.06
PAX6-261ENST00000639943 MUSTN1Q8IVN3 82 aa8.46□□□□□ -1.06
PAX6-261ENST00000639943 TTC32Q5I0X7 151 aa8.45□□□□□ -1.06
PAX6-261ENST00000639943 IGHV3OR16-9A0A0B4J2B5 98 aa8.45□□□□□ -1.06
PAX6-261ENST00000639943 APOMO95445 188 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms