RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 MUC22E2RYF6 1773 aaPredicted RBP13.45□□□□□ -0.26
SCARB2-213ENST00000638680 Q8IZM0 81 aa13.45□□□□□ -0.26
SCARB2-213ENST00000638680 LELP1Q5T871 98 aa13.44□□□□□ -0.26
SCARB2-213ENST00000638680 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.44□□□□□ -0.26
SCARB2-213ENST00000638680 COX6A2Q02221 97 aa13.43□□□□□ -0.26
SCARB2-213ENST00000638680 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.43□□□□□ -0.26
SCARB2-213ENST00000638680 A0A087WVE0 104 aa13.42□□□□□ -0.26
SCARB2-213ENST00000638680 INAFM1C9JVW0 142 aa13.42□□□□□ -0.26
SCARB2-213ENST00000638680 A0A096LNJ9 63 aa13.42□□□□□ -0.26
SCARB2-213ENST00000638680 A6NED7 52 aa13.42□□□□□ -0.26
SCARB2-213ENST00000638680 SMIM1B2RUZ4 78 aa13.42□□□□□ -0.26
SCARB2-213ENST00000638680 NTM-AS1Q6ZSK4 140 aa13.42□□□□□ -0.26
SCARB2-213ENST00000638680 M0QXV9 152 aa13.41□□□□□ -0.26
SCARB2-213ENST00000638680 KPRPQ5T749 579 aaPredicted RBP13.41□□□□□ -0.26
SCARB2-213ENST00000638680 A0A087WYN8 130 aa13.41□□□□□ -0.26
SCARB2-213ENST00000638680 PRR15LQ9BU68 103 aa13.41□□□□□ -0.26
SCARB2-213ENST00000638680 CHCHD7Q9BUK0 85 aa13.41□□□□□ -0.26
SCARB2-213ENST00000638680 ADAMTSL4-AS1Q5T5F5 129 aa13.41□□□□□ -0.26
SCARB2-213ENST00000638680 HRCT1Q6UXD1 115 aa13.41□□□□□ -0.26
SCARB2-213ENST00000638680 WNK1Q9H4A3 2382 aa13.4□□□□□ -0.26
SCARB2-213ENST00000638680 CYSRT1A8MQ03 144 aa13.4□□□□□ -0.27
SCARB2-213ENST00000638680 ZNF580Q9UK33 172 aa13.39□□□□□ -0.27
SCARB2-213ENST00000638680 Q8N814 137 aa13.39□□□□□ -0.27
SCARB2-213ENST00000638680 LINC01006Q8NI28 216 aa13.38□□□□□ -0.27
SCARB2-213ENST00000638680 CELA1Q9UNI1 258 aa13.38□□□□□ -0.27
SCARB2-213ENST00000638680 RPL28P46779 137 aaKnown RBP13.38□□□□□ -0.27
SCARB2-213ENST00000638680 SPINK6Q6UWN8 80 aa13.38□□□□□ -0.27
SCARB2-213ENST00000638680 SPG11Q96JI7 2443 aa13.37□□□□□ -0.27
SCARB2-213ENST00000638680 TRAV7A0A075B6U4 112 aa13.37□□□□□ -0.27
SCARB2-213ENST00000638680 IL17DQ8TAD2 202 aa13.37□□□□□ -0.27
SCARB2-213ENST00000638680 MRGPRG-AS1Q2M3A8 158 aa13.37□□□□□ -0.27
SCARB2-213ENST00000638680 SMIM26A0A096LP01 95 aa13.37□□□□□ -0.27
SCARB2-213ENST00000638680 DSCAMO60469 2012 aa13.37□□□□□ -0.27
SCARB2-213ENST00000638680 C9orf116Q5BN46 136 aaPredicted RBP13.36□□□□□ -0.27
SCARB2-213ENST00000638680 C1orf195Q5TG92 126 aa13.36□□□□□ -0.27
SCARB2-213ENST00000638680 TRAV10A0A0B4J240 114 aa13.35□□□□□ -0.27
SCARB2-213ENST00000638680 UNQ6190/PRO20217Q6UXQ8 127 aa13.35□□□□□ -0.27
SCARB2-213ENST00000638680 PRR3P79522 188 aaKnown RBP13.35□□□□□ -0.27
SCARB2-213ENST00000638680 IGLV2-18A0A075B6J9 118 aa13.35□□□□□ -0.27
SCARB2-213ENST00000638680 LOC107984640A0A0U1RRK4 108 aa13.34□□□□□ -0.27
SCARB2-213ENST00000638680 SERP1Q9Y6X1 66 aa13.34□□□□□ -0.27
SCARB2-213ENST00000638680 EML5Q05BV3 1969 aa13.34□□□□□ -0.27
SCARB2-213ENST00000638680 HIVEP2P31629 2446 aa13.34□□□□□ -0.27
SCARB2-213ENST00000638680 ARHGAP32A7KAX9 2087 aa13.34□□□□□ -0.27
SCARB2-213ENST00000638680 Q8N9L7 120 aa13.34□□□□□ -0.27
SCARB2-213ENST00000638680 MUC7Q8TAX7 377 aa13.33□□□□□ -0.28
SCARB2-213ENST00000638680 K7ERS5 55 aa13.33□□□□□ -0.28
SCARB2-213ENST00000638680 COX8CQ7Z4L0 72 aa13.33□□□□□ -0.28
SCARB2-213ENST00000638680 CDSNQ15517 529 aa13.33□□□□□ -0.28
SCARB2-213ENST00000638680 AMELXQ99217 191 aa13.33□□□□□ -0.28
SCARB2-213ENST00000638680 MUC6Q6W4X9 2439 aa13.32□□□□□ -0.28
SCARB2-213ENST00000638680 IGLV4-60A0A075B6I1 120 aa13.31□□□□□ -0.28
SCARB2-213ENST00000638680 TRBV10-3A0A0K0K1G6 114 aa13.31□□□□□ -0.28
SCARB2-213ENST00000638680 ODF3L2Q3SX64 289 aa13.31□□□□□ -0.28
SCARB2-213ENST00000638680 SOSTDC1Q6X4U4 206 aa13.31□□□□□ -0.28
SCARB2-213ENST00000638680 IGLV9-49A0A0B4J1Y8 123 aa13.31□□□□□ -0.28
SCARB2-213ENST00000638680 AVPP01185 164 aa13.31□□□□□ -0.28
SCARB2-213ENST00000638680 CEP192Q8TEP8 1941 aa13.3□□□□□ -0.28
SCARB2-213ENST00000638680 ZNF843Q8N446 348 aa13.3□□□□□ -0.28
SCARB2-213ENST00000638680 ZNF706Q9Y5V0 76 aaPredicted RBP13.29□□□□□ -0.28
SCARB2-213ENST00000638680 IGHV4-30-4P0DP06 118 aa13.29□□□□□ -0.28
SCARB2-213ENST00000638680 BDP1A6H8Y1 2624 aa13.29□□□□□ -0.28
SCARB2-213ENST00000638680 PLAC8L1A1L4L8 177 aa13.28□□□□□ -0.28
SCARB2-213ENST00000638680 C10orf142B7Z368 130 aa13.28□□□□□ -0.28
SCARB2-213ENST00000638680 CSPG4Q6UVK1 2322 aa13.27□□□□□ -0.28
SCARB2-213ENST00000638680 LY6G6DO95868 133 aa13.27□□□□□ -0.28
SCARB2-213ENST00000638680 Q6ZSN1 163 aa13.26□□□□□ -0.29
SCARB2-213ENST00000638680 SORL1Q92673 2214 aa13.25□□□□□ -0.29
SCARB2-213ENST00000638680 C1orf137Q5JT78 98 aa13.25□□□□□ -0.29
SCARB2-213ENST00000638680 SHISA2Q6UWI4 295 aa13.25□□□□□ -0.29
SCARB2-213ENST00000638680 C7orf33Q8WU49 177 aa13.25□□□□□ -0.29
SCARB2-213ENST00000638680 NANOS2P60321 138 aaKnown RBP13.25□□□□□ -0.29
SCARB2-213ENST00000638680 PRYO14603 147 aa13.24□□□□□ -0.29
SCARB2-213ENST00000638680 M0R2N4 97 aa13.24□□□□□ -0.29
SCARB2-213ENST00000638680 Q8N3U1 123 aa13.24□□□□□ -0.29
SCARB2-213ENST00000638680 EGFEM1PQ0D2K5 195 aa13.24□□□□□ -0.29
SCARB2-213ENST00000638680 PTPRSQ13332 1948 aa13.24□□□□□ -0.29
SCARB2-213ENST00000638680 LINC00208Q96KT6 92 aa13.23□□□□□ -0.29
SCARB2-213ENST00000638680 ACACBO00763 2458 aa13.23□□□□□ -0.29
SCARB2-213ENST00000638680 C10orf25Q5T742 122 aa13.23□□□□□ -0.29
SCARB2-213ENST00000638680 CSDC2Q9Y534 153 aaKnown RBP13.23□□□□□ -0.29
SCARB2-213ENST00000638680 NAV3Q8IVL0 2385 aa13.22□□□□□ -0.29
SCARB2-213ENST00000638680 FHL2Q14192 279 aa13.22□□□□□ -0.29
SCARB2-213ENST00000638680 CDIP1Q9H305 208 aa13.22□□□□□ -0.29
SCARB2-213ENST00000638680 LRP4O75096 1905 aa13.21□□□□□ -0.3
SCARB2-213ENST00000638680 PRO3102Q9H379 93 aa13.2□□□□□ -0.3
SCARB2-213ENST00000638680 ESRGQ1W209 222 aa13.19□□□□□ -0.3
SCARB2-213ENST00000638680 C6orf223Q8N319 242 aa13.19□□□□□ -0.3
SCARB2-213ENST00000638680 LINC00846Q9NV44 126 aa13.19□□□□□ -0.3
SCARB2-213ENST00000638680 TTC28Q96AY4 2481 aa13.18□□□□□ -0.3
SCARB2-213ENST00000638680 LINC00575Q6W349 94 aa13.17□□□□□ -0.3
SCARB2-213ENST00000638680 REG3GQ6UW15 175 aa13.17□□□□□ -0.3
SCARB2-213ENST00000638680 CPAMD8Q8IZJ3 1885 aa13.17□□□□□ -0.3
SCARB2-213ENST00000638680 BEAN1Q3B7T3 259 aa13.17□□□□□ -0.3
SCARB2-213ENST00000638680 PMAIP1Q13794 54 aa13.16□□□□□ -0.3
SCARB2-213ENST00000638680 LINC01547P58512 204 aaPredicted RBP13.15□□□□□ -0.3
SCARB2-213ENST00000638680 SRCAPQ6ZRS2 3230 aa13.15□□□□□ -0.3
SCARB2-213ENST00000638680 LINC00474Q9P2X8 69 aa13.14□□□□□ -0.31
SCARB2-213ENST00000638680 IGLV1-51P01701 117 aa13.14□□□□□ -0.31
SCARB2-213ENST00000638680 Q6ZVQ6 151 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms