RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 TMEM170BQ5T4T1 132 aa6.91□□□□□ -1.3
ATM-226ENST00000638443 AMELXQ99217 191 aa6.91□□□□□ -1.3
ATM-226ENST00000638443 PRADC1Q9BSG0 188 aa6.91□□□□□ -1.3
ATM-226ENST00000638443 PYGO1Q9Y3Y4 419 aa6.91□□□□□ -1.3
ATM-226ENST00000638443 LINC01549A6NIU2 74 aa6.9□□□□□ -1.3
ATM-226ENST00000638443 C1orf195Q5TG92 126 aa6.9□□□□□ -1.3
ATM-226ENST00000638443 Q6ZVH6 145 aa6.9□□□□□ -1.3
ATM-226ENST00000638443 SBSPONQ8IVN8 264 aa6.9□□□□□ -1.3
ATM-226ENST00000638443 MRPS16Q9Y3D3 137 aaKnown RBP6.9□□□□□ -1.3
ATM-226ENST00000638443 NBEAL1Q6ZS30 2694 aa6.9□□□□□ -1.31
ATM-226ENST00000638443 TSPEAR-AS2P59090 65 aa6.89□□□□□ -1.31
ATM-226ENST00000638443 LCE2CQ5TA81 110 aa6.89□□□□□ -1.31
ATM-226ENST00000638443 VSIG2Q96IQ7 327 aa6.89□□□□□ -1.31
ATM-226ENST00000638443 SPANXA1Q9NS26 97 aa6.89□□□□□ -1.31
ATM-226ENST00000638443 ZNF22P17026 224 aaPredicted RBP6.89□□□□□ -1.31
ATM-226ENST00000638443 PRO0255Q9UI72 69 aa6.89□□□□□ -1.31
ATM-226ENST00000638443 SMAGPQ0VAQ4 97 aa6.88□□□□□ -1.31
ATM-226ENST00000638443 GAGE6Q13070 117 aa6.88□□□□□ -1.31
ATM-226ENST00000638443 HUWE1Q7Z6Z7 4374 aaKnown RBP6.88□□□□□ -1.31
ATM-226ENST00000638443 PAX4O43316 350 aa6.88□□□□□ -1.31
ATM-226ENST00000638443 NFE4Q86UQ8 179 aa6.88□□□□□ -1.31
ATM-226ENST00000638443 TMEM243Q9BU79 118 aa6.88□□□□□ -1.31
ATM-226ENST00000638443 TRBV25-1A0A075B6N4 114 aa6.87□□□□□ -1.31
ATM-226ENST00000638443 TRBV6-8A0A0A6YYG3 113 aa6.87□□□□□ -1.31
ATM-226ENST00000638443 E9PLD3 99 aa6.87□□□□□ -1.31
ATM-226ENST00000638443 SPART-AS1P0CW21 52 aa6.87□□□□□ -1.31
ATM-226ENST00000638443 GTSF1LQ9H1H1 148 aa6.87□□□□□ -1.31
ATM-226ENST00000638443 MGAM2Q2M2H8 2515 aa6.87□□□□□ -1.31
ATM-226ENST00000638443 IGLV4-60A0A075B6I1 120 aa6.86□□□□□ -1.31
ATM-226ENST00000638443 TRAV8-3A0A0A6YYJ7 113 aa6.86□□□□□ -1.31
ATM-226ENST00000638443 K7EIL1 84 aa6.86□□□□□ -1.31
ATM-226ENST00000638443 UBE2L6O14933 153 aa6.86□□□□□ -1.31
ATM-226ENST00000638443 ATP5G1P05496 136 aa6.86□□□□□ -1.31
ATM-226ENST00000638443 C12orf74Q32Q52 190 aa6.86□□□□□ -1.31
ATM-226ENST00000638443 BVES-AS1Q5T3Y7 98 aa6.86□□□□□ -1.31
ATM-226ENST00000638443 Q8N3U1 123 aa6.86□□□□□ -1.31
ATM-226ENST00000638443 ATP6V0E2Q8NHE4 81 aa6.86□□□□□ -1.31
ATM-226ENST00000638443 TRAV13-1A0A0B4J241 112 aa6.86□□□□□ -1.31
ATM-226ENST00000638443 UBE2D1P51668 147 aa6.86□□□□□ -1.31
ATM-226ENST00000638443 MRPS36P82909 103 aaKnown RBP6.86□□□□□ -1.31
ATM-226ENST00000638443 COX6A2Q02221 97 aa6.86□□□□□ -1.31
ATM-226ENST00000638443 PLEKHB2Q96CS7 222 aa6.86□□□□□ -1.31
ATM-226ENST00000638443 CHCHD5Q9BSY4 110 aa6.86□□□□□ -1.31
ATM-226ENST00000638443 IGKV3OR2-268A0A0C4DH90 116 aa6.85□□□□□ -1.31
ATM-226ENST00000638443 A0A0J9YWU9 116 aa6.85□□□□□ -1.31
ATM-226ENST00000638443 TMEM223A0PJW6 202 aa6.85□□□□□ -1.31
ATM-226ENST00000638443 AMMECR1LQ6DCA0 310 aa6.85□□□□□ -1.31
ATM-226ENST00000638443 OR13C6PQ8NH95 151 aa6.85□□□□□ -1.31
ATM-226ENST00000638443 DNHD1Q96M86 4753 aa6.85□□□□□ -1.31
ATM-226ENST00000638443 ZNF815PA8K554 130 aa6.85□□□□□ -1.31
ATM-226ENST00000638443 Q6ZTC4 211 aa6.85□□□□□ -1.31
ATM-226ENST00000638443 OR5A1Q8NGJ0 315 aa6.85□□□□□ -1.31
ATM-226ENST00000638443 TIMM21Q9BVV7 248 aa6.85□□□□□ -1.31
ATM-226ENST00000638443 CDC42SE2Q9NRR3 84 aa6.85□□□□□ -1.31
ATM-226ENST00000638443 MYMXA0A1B0GTQ4 84 aa6.84□□□□□ -1.31
ATM-226ENST00000638443 SPINK8P0C7L1 97 aa6.84□□□□□ -1.31
ATM-226ENST00000638443 CDKN2A-AS1Q9UH64 79 aa6.84□□□□□ -1.31
ATM-226ENST00000638443 HERVK_113P61574 105 aa6.83□□□□□ -1.32
ATM-226ENST00000638443 DEFB121Q5J5C9 76 aa6.83□□□□□ -1.32
ATM-226ENST00000638443 LINC00242Q5T6M2 205 aa6.83□□□□□ -1.32
ATM-226ENST00000638443 CLPSL2Q6UWE3 100 aa6.83□□□□□ -1.32
ATM-226ENST00000638443 NANOS2P60321 138 aaKnown RBP6.83□□□□□ -1.32
ATM-226ENST00000638443 PKIGQ9Y2B9 76 aa6.83□□□□□ -1.32
ATM-226ENST00000638443 J3QQQ9 107 aa6.82□□□□□ -1.32
ATM-226ENST00000638443 FXYD2P54710 66 aa6.82□□□□□ -1.32
ATM-226ENST00000638443 IGHV3-30-3P0DP02 117 aa6.82□□□□□ -1.32
ATM-226ENST00000638443 COL5A1-AS1Q5SY13 56 aa6.82□□□□□ -1.32
ATM-226ENST00000638443 TMEM262E9PQX1 116 aa6.81□□□□□ -1.32
ATM-226ENST00000638443 HSD52Q0P140 79 aa6.81□□□□□ -1.32
ATM-226ENST00000638443 TMEM101Q96IK0 257 aa6.81□□□□□ -1.32
ATM-226ENST00000638443 FAM240AA0A1B0GVK7 77 aa6.8□□□□□ -1.32
ATM-226ENST00000638443 LGALS3P17931 250 aaKnown RBP6.8□□□□□ -1.32
ATM-226ENST00000638443 SCGB1D4Q6XE38 83 aa6.8□□□□□ -1.32
ATM-226ENST00000638443 C11orf68Q9H3H3 251 aaKnown RBP6.8□□□□□ -1.32
ATM-226ENST00000638443 HIGD1BQ9P298 99 aa6.8□□□□□ -1.32
ATM-226ENST00000638443 LEPROTO15243 131 aa6.8□□□□□ -1.32
ATM-226ENST00000638443 LCE2AQ5TA79 106 aaPredicted RBP6.8□□□□□ -1.32
ATM-226ENST00000638443 IGLV5-45A0A087WSX0 123 aa6.79□□□□□ -1.32
ATM-226ENST00000638443 K7ERJ3 54 aa6.79□□□□□ -1.32
ATM-226ENST00000638443 C10orf126Q8N4M7 172 aa6.79□□□□□ -1.32
ATM-226ENST00000638443 ORAOV1Q8WV07 137 aa6.79□□□□□ -1.32
ATM-226ENST00000638443 DNAH9Q9NYC9 4486 aa6.79□□□□□ -1.32
ATM-226ENST00000638443 IGHV1-58A0A0C4DH39 117 aa6.79□□□□□ -1.32
ATM-226ENST00000638443 H7C423 109 aa6.79□□□□□ -1.32
ATM-226ENST00000638443 KPRPQ5T749 579 aaPredicted RBP6.79□□□□□ -1.32
ATM-226ENST00000638443 NAA38Q9BRA0 125 aaKnown RBP6.79□□□□□ -1.32
ATM-226ENST00000638443 TM2D3Q9BRN9 247 aa6.79□□□□□ -1.32
ATM-226ENST00000638443 ICOSQ9Y6W8 199 aa6.79□□□□□ -1.32
ATM-226ENST00000638443 A0A087WZ39 114 aa6.78□□□□□ -1.32
ATM-226ENST00000638443 SMIM1B2RUZ4 78 aa6.78□□□□□ -1.32
ATM-226ENST00000638443 TAX1BP3O14907 124 aa6.78□□□□□ -1.32
ATM-226ENST00000638443 RPL18AQ02543 176 aaKnown RBP6.78□□□□□ -1.32
ATM-226ENST00000638443 HIST1H4GQ99525 98 aa6.78□□□□□ -1.32
ATM-226ENST00000638443 TEX48A0A1B0GUV7 120 aa6.77□□□□□ -1.33
ATM-226ENST00000638443 K7ERU9 68 aa6.77□□□□□ -1.33
ATM-226ENST00000638443 HERVK_113P63121 156 aa6.77□□□□□ -1.33
ATM-226ENST00000638443 CEND1Q8N111 149 aa6.77□□□□□ -1.33
ATM-226ENST00000638443 COL7A1Q02388 2944 aa6.77□□□□□ -1.33
ATM-226ENST00000638443 Q6ZVQ6 151 aa6.77□□□□□ -1.33
ATM-226ENST00000638443 FAM19A3Q7Z5A8 133 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms