RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 LOC107984156A0A0G2JMH3 177 aa10.7□□□□□ -0.7
SCN8A-214ENST00000637709 TSPAN13O95857 204 aa10.7□□□□□ -0.7
SCN8A-214ENST00000637709 PRB2P02812 416 aaPredicted RBP10.7□□□□□ -0.7
SCN8A-214ENST00000637709 PRIMA1Q86XR5 153 aa10.7□□□□□ -0.7
SCN8A-214ENST00000637709 ARL17AQ8IVW1 177 aa10.7□□□□□ -0.7
SCN8A-214ENST00000637709 Q8NAQ8 132 aa10.7□□□□□ -0.7
SCN8A-214ENST00000637709 ATP6V0E2Q8NHE4 81 aa10.7□□□□□ -0.7
SCN8A-214ENST00000637709 GTSF1LQ9H1H1 148 aa10.7□□□□□ -0.7
SCN8A-214ENST00000637709 TRAV26-1A0A087WT03 109 aa10.69□□□□□ -0.7
SCN8A-214ENST00000637709 PAX4O43316 350 aa10.69□□□□□ -0.7
SCN8A-214ENST00000637709 DAD1P61803 113 aa10.69□□□□□ -0.7
SCN8A-214ENST00000637709 LINC00612Q8N6U2 182 aa10.69□□□□□ -0.7
SCN8A-214ENST00000637709 LITAFQ99732 161 aa10.69□□□□□ -0.7
SCN8A-214ENST00000637709 SMIM1B2RUZ4 78 aa10.69□□□□□ -0.7
SCN8A-214ENST00000637709 Q9H8V8 135 aa10.69□□□□□ -0.7
SCN8A-214ENST00000637709 A0A1B0GWB2 263 aa10.68□□□□□ -0.7
SCN8A-214ENST00000637709 TMEM238LA0A1B0GVL6 79 aa10.68□□□□□ -0.7
SCN8A-214ENST00000637709 A6NJY4 79 aa10.68□□□□□ -0.7
SCN8A-214ENST00000637709 F5H768 121 aa10.68□□□□□ -0.7
SCN8A-214ENST00000637709 HERVK_113P63121 156 aa10.68□□□□□ -0.7
SCN8A-214ENST00000637709 SPANXB1Q9NS25 103 aaPredicted RBP10.68□□□□□ -0.7
SCN8A-214ENST00000637709 TOMM7Q9P0U1 55 aa10.68□□□□□ -0.7
SCN8A-214ENST00000637709 PRO0255Q9UI72 69 aa10.68□□□□□ -0.7
SCN8A-214ENST00000637709 TIRAPP58753 221 aa10.67□□□□□ -0.7
SCN8A-214ENST00000637709 C11orf68Q9H3H3 251 aaKnown RBP10.67□□□□□ -0.7
SCN8A-214ENST00000637709 SMIM9A6NGZ8 99 aa10.67□□□□□ -0.7
SCN8A-214ENST00000637709 RNF151Q2KHN1 245 aa10.67□□□□□ -0.7
SCN8A-214ENST00000637709 CSDC2Q9Y534 153 aaKnown RBP10.67□□□□□ -0.7
SCN8A-214ENST00000637709 MGAM2Q2M2H8 2515 aa10.67□□□□□ -0.7
SCN8A-214ENST00000637709 IGLV5-45A0A087WSX0 123 aa10.66□□□□□ -0.7
SCN8A-214ENST00000637709 ZFAND6Q6FIF0 208 aa10.66□□□□□ -0.7
SCN8A-214ENST00000637709 TMEM238C9JI98 176 aa10.66□□□□□ -0.7
SCN8A-214ENST00000637709 G3V4G9 280 aa10.66□□□□□ -0.7
SCN8A-214ENST00000637709 C5orf38Q86SI9 138 aa10.66□□□□□ -0.7
SCN8A-214ENST00000637709 XCL1P47992 114 aa10.64□□□□□ -0.71
SCN8A-214ENST00000637709 IGLV10-54A0A075B6I4 117 aa10.64□□□□□ -0.71
SCN8A-214ENST00000637709 LYRM9A8MSI8 78 aa10.64□□□□□ -0.71
SCN8A-214ENST00000637709 RNF183Q96D59 192 aa10.64□□□□□ -0.71
SCN8A-214ENST00000637709 PSMB2P49721 201 aa10.63□□□□□ -0.71
SCN8A-214ENST00000637709 WFDC2Q14508 124 aa10.63□□□□□ -0.71
SCN8A-214ENST00000637709 RBX1P62877 108 aa10.63□□□□□ -0.71
SCN8A-214ENST00000637709 IGLV5-39A0A0G2JS06 123 aa10.62□□□□□ -0.71
SCN8A-214ENST00000637709 CIDEAO60543 219 aa10.62□□□□□ -0.71
SCN8A-214ENST00000637709 PRO1854Q9UHT4 67 aa10.62□□□□□ -0.71
SCN8A-214ENST00000637709 RPL24P83731 157 aaKnown RBP10.61□□□□□ -0.71
SCN8A-214ENST00000637709 Q1RN00 199 aa10.61□□□□□ -0.71
SCN8A-214ENST00000637709 OCIAD2Q56VL3 154 aa10.61□□□□□ -0.71
SCN8A-214ENST00000637709 NDUFA1O15239 70 aa10.61□□□□□ -0.71
SCN8A-214ENST00000637709 ATP5G1P05496 136 aa10.61□□□□□ -0.71
SCN8A-214ENST00000637709 MIFP14174 115 aa10.61□□□□□ -0.71
SCN8A-214ENST00000637709 MEIG1Q5JSS6 88 aa10.61□□□□□ -0.71
SCN8A-214ENST00000637709 SH2D6Q7Z4S9 175 aa10.6□□□□□ -0.71
SCN8A-214ENST00000637709 WIPF1O43516 503 aa10.6□□□□□ -0.71
SCN8A-214ENST00000637709 SPART-AS1P0CW21 52 aa10.6□□□□□ -0.71
SCN8A-214ENST00000637709 MIAQ16674 131 aa10.6□□□□□ -0.71
SCN8A-214ENST00000637709 LINC00269Q8N2A0 174 aa10.6□□□□□ -0.71
SCN8A-214ENST00000637709 LINC00959A0A1B0GUT2 108 aa10.59□□□□□ -0.71
SCN8A-214ENST00000637709 SCGB1C2P0DMR2 95 aa10.59□□□□□ -0.71
SCN8A-214ENST00000637709 TCL1BO95988 128 aa10.58□□□□□ -0.72
SCN8A-214ENST00000637709 DNAH3Q8TD57 4116 aa10.58□□□□□ -0.72
SCN8A-214ENST00000637709 IGHV3OR16-9A0A0B4J2B5 98 aa10.58□□□□□ -0.72
SCN8A-214ENST00000637709 IGHV3-33P01772 117 aa10.58□□□□□ -0.72
SCN8A-214ENST00000637709 SOSTDC1Q6X4U4 206 aa10.58□□□□□ -0.72
SCN8A-214ENST00000637709 FAM19A3Q7Z5A8 133 aa10.58□□□□□ -0.72
SCN8A-214ENST00000637709 H7C423 109 aa10.57□□□□□ -0.72
SCN8A-214ENST00000637709 ANGP03950 147 aaKnown RBP10.57□□□□□ -0.72
SCN8A-214ENST00000637709 COL7A1Q02388 2944 aa10.57□□□□□ -0.72
SCN8A-214ENST00000637709 SMAGPQ0VAQ4 97 aa10.57□□□□□ -0.72
SCN8A-214ENST00000637709 ETDBQ3ZM63 59 aa10.57□□□□□ -0.72
SCN8A-214ENST00000637709 SPANXDQ9BXN6 97 aa10.56□□□□□ -0.72
SCN8A-214ENST00000637709 SPANXCQ9NY87 97 aa10.56□□□□□ -0.72
SCN8A-214ENST00000637709 TEX48A0A1B0GUV7 120 aa10.56□□□□□ -0.72
SCN8A-214ENST00000637709 COX7B2Q8TF08 81 aa10.56□□□□□ -0.72
SCN8A-214ENST00000637709 ERG28Q9UKR5 140 aa10.56□□□□□ -0.72
SCN8A-214ENST00000637709 Q6ZTC4 211 aa10.55□□□□□ -0.72
SCN8A-214ENST00000637709 LYSTQ99698 3801 aa10.55□□□□□ -0.72
SCN8A-214ENST00000637709 PFN2P35080 140 aa10.55□□□□□ -0.72
SCN8A-214ENST00000637709 C2orf82Q6UX34 121 aa10.55□□□□□ -0.72
SCN8A-214ENST00000637709 LINC00308Q8TCZ7 52 aa10.55□□□□□ -0.72
SCN8A-214ENST00000637709 MRAPQ8TCY5 172 aa10.54□□□□□ -0.72
SCN8A-214ENST00000637709 SHISA2Q6UWI4 295 aa10.53□□□□□ -0.72
SCN8A-214ENST00000637709 CIRBPQ14011 172 aaKnown RBP10.53□□□□□ -0.72
SCN8A-214ENST00000637709 A0A0B4J2C4 111 aa10.52□□□□□ -0.72
SCN8A-214ENST00000637709 A0A0J9YWU9 116 aa10.52□□□□□ -0.72
SCN8A-214ENST00000637709 TRIAP1O43715 76 aa10.52□□□□□ -0.72
SCN8A-214ENST00000637709 SMCPP49901 116 aaPredicted RBP10.52□□□□□ -0.72
SCN8A-214ENST00000637709 LINC00526Q96FQ7 95 aa10.52□□□□□ -0.72
SCN8A-214ENST00000637709 PRO0461Q9UI25 63 aa10.52□□□□□ -0.72
SCN8A-214ENST00000637709 NANOS2P60321 138 aaKnown RBP10.52□□□□□ -0.73
SCN8A-214ENST00000637709 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.51□□□□□ -0.73
SCN8A-214ENST00000637709 RPL13AP40429 203 aaKnown RBP10.51□□□□□ -0.73
SCN8A-214ENST00000637709 A0A087WZ39 114 aa10.51□□□□□ -0.73
SCN8A-214ENST00000637709 EGFEM1PQ0D2K5 195 aa10.51□□□□□ -0.73
SCN8A-214ENST00000637709 MIR7-3HGQ8N6C7 128 aa10.51□□□□□ -0.73
SCN8A-214ENST00000637709 REG3AQ06141 175 aa10.5□□□□□ -0.73
SCN8A-214ENST00000637709 SS18Q15532 418 aa10.5□□□□□ -0.73
SCN8A-214ENST00000637709 VPS25Q9BRG1 176 aa10.5□□□□□ -0.73
SCN8A-214ENST00000637709 A0A1B0GUV1 79 aa10.5□□□□□ -0.73
SCN8A-214ENST00000637709 LINC00158P58513 81 aa10.5□□□□□ -0.73
SCN8A-214ENST00000637709 MRPL23Q16540 153 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms