RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 A0A087WYN8 130 aa7.12□□□□□ -1.27
CACNA1A-242ENST00000637485 SYCNQ0VAF6 134 aa7.12□□□□□ -1.27
CACNA1A-242ENST00000637485 PCNX1Q96RV3 2341 aa7.12□□□□□ -1.27
CACNA1A-242ENST00000637485 LRP4O75096 1905 aa7.12□□□□□ -1.27
CACNA1A-242ENST00000637485 Q8IZM0 81 aa7.11□□□□□ -1.27
CACNA1A-242ENST00000637485 ABCA4P78363 2273 aa7.11□□□□□ -1.27
CACNA1A-242ENST00000637485 NBASA2RRP1 2371 aa7.11□□□□□ -1.27
CACNA1A-242ENST00000637485 FREM1Q5H8C1 2179 aa7.11□□□□□ -1.27
CACNA1A-242ENST00000637485 A0A087WZ39 114 aa7.11□□□□□ -1.27
CACNA1A-242ENST00000637485 C11orf71Q6IPW1 123 aa7.11□□□□□ -1.27
CACNA1A-242ENST00000637485 HILS1P60008 231 aa7.11□□□□□ -1.27
CACNA1A-242ENST00000637485 C1orf137Q5JT78 98 aa7.11□□□□□ -1.27
CACNA1A-242ENST00000637485 SPTAN1Q13813 2472 aaKnown RBP7.1□□□□□ -1.27
CACNA1A-242ENST00000637485 PLCE1Q9P212 2302 aa7.1□□□□□ -1.27
CACNA1A-242ENST00000637485 IGKV2-28A0A075B6P5 120 aa7.1□□□□□ -1.27
CACNA1A-242ENST00000637485 IGKV2D-28P01615 120 aa7.1□□□□□ -1.27
CACNA1A-242ENST00000637485 PCOTHQ58A44 107 aa7.1□□□□□ -1.27
CACNA1A-242ENST00000637485 IGLV4-69A0A075B6H9 119 aa7.1□□□□□ -1.27
CACNA1A-242ENST00000637485 C10orf25Q5T742 122 aa7.1□□□□□ -1.27
CACNA1A-242ENST00000637485 ZNF843Q8N446 348 aa7.09□□□□□ -1.27
CACNA1A-242ENST00000637485 K7EQG2 157 aa7.09□□□□□ -1.27
CACNA1A-242ENST00000637485 PCNX3Q9H6A9 2034 aa7.09□□□□□ -1.27
CACNA1A-242ENST00000637485 SPINK6Q6UWN8 80 aa7.09□□□□□ -1.27
CACNA1A-242ENST00000637485 HCG22E2RYF7 251 aa7.09□□□□□ -1.28
CACNA1A-242ENST00000637485 PRM2P04554 102 aa7.08□□□□□ -1.28
CACNA1A-242ENST00000637485 LINC00959A0A1B0GUT2 108 aa7.08□□□□□ -1.28
CACNA1A-242ENST00000637485 C19orf84I3L1E1 186 aa7.08□□□□□ -1.28
CACNA1A-242ENST00000637485 RNASE3P12724 160 aaKnown RBP7.08□□□□□ -1.28
CACNA1A-242ENST00000637485 LINC00575Q6W349 94 aa7.08□□□□□ -1.28
CACNA1A-242ENST00000637485 Q6YL49 198 aa7.08□□□□□ -1.28
CACNA1A-242ENST00000637485 ATRXP46100 2492 aa7.08□□□□□ -1.28
CACNA1A-242ENST00000637485 DEFB135Q30KP9 77 aa7.08□□□□□ -1.28
CACNA1A-242ENST00000637485 A0A1B0GU69 56 aa7.07□□□□□ -1.28
CACNA1A-242ENST00000637485 SMAD5-AS1Q9Y6J3 95 aa7.07□□□□□ -1.28
CACNA1A-242ENST00000637485 RETNLBQ9BQ08 111 aa7.07□□□□□ -1.28
CACNA1A-242ENST00000637485 TSPEAR-AS2P59090 65 aa7.07□□□□□ -1.28
CACNA1A-242ENST00000637485 LINC01548A6NM66 108 aa7.06□□□□□ -1.28
CACNA1A-242ENST00000637485 GAS8-AS1O95177 125 aa7.06□□□□□ -1.28
CACNA1A-242ENST00000637485 ARHGAP21Q5T5U3 1957 aa7.06□□□□□ -1.28
CACNA1A-242ENST00000637485 Q6ZSV7 163 aa7.05□□□□□ -1.28
CACNA1A-242ENST00000637485 C1orf64Q8NEQ6 169 aa7.05□□□□□ -1.28
CACNA1A-242ENST00000637485 MED12LQ86YW9 2145 aa7.05□□□□□ -1.28
CACNA1A-242ENST00000637485 SMIM1B2RUZ4 78 aa7.05□□□□□ -1.28
CACNA1A-242ENST00000637485 CDC42SE2Q9NRR3 84 aa7.05□□□□□ -1.28
CACNA1A-242ENST00000637485 PROK1P58294 105 aa7.05□□□□□ -1.28
CACNA1A-242ENST00000637485 MRGPRG-AS1Q2M3A8 158 aa7.05□□□□□ -1.28
CACNA1A-242ENST00000637485 ADAMTSL4-AS1Q5T5F5 129 aa7.05□□□□□ -1.28
CACNA1A-242ENST00000637485 LINC00242Q5T6M2 205 aa7.05□□□□□ -1.28
CACNA1A-242ENST00000637485 DEFB4AO15263 64 aa7.04□□□□□ -1.28
CACNA1A-242ENST00000637485 SBSPONQ8IVN8 264 aa7.04□□□□□ -1.28
CACNA1A-242ENST00000637485 C11orf21Q9P2W6 132 aa7.04□□□□□ -1.28
CACNA1A-242ENST00000637485 PRO0461Q9UI25 63 aa7.04□□□□□ -1.28
CACNA1A-242ENST00000637485 SPINT4Q6UDR6 99 aa7.04□□□□□ -1.28
CACNA1A-242ENST00000637485 CYP4F30PQ9H0H9 118 aa7.04□□□□□ -1.28
CACNA1A-242ENST00000637485 SMCPP49901 116 aaPredicted RBP7.03□□□□□ -1.28
CACNA1A-242ENST00000637485 ZFHX2Q9C0A1 2572 aaPredicted RBP7.03□□□□□ -1.28
CACNA1A-242ENST00000637485 COL5A1P20908 1838 aaPredicted RBP7.03□□□□□ -1.28
CACNA1A-242ENST00000637485 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.03□□□□□ -1.28
CACNA1A-242ENST00000637485 KLLNB2CW77 178 aa7.03□□□□□ -1.28
CACNA1A-242ENST00000637485 PLA2G2AP14555 144 aa7.03□□□□□ -1.28
CACNA1A-242ENST00000637485 H3BPC8 53 aa7.02□□□□□ -1.29
CACNA1A-242ENST00000637485 A0A096LNJ9 63 aa7.02□□□□□ -1.29
CACNA1A-242ENST00000637485 FAM19A4Q96LR4 140 aa7.01□□□□□ -1.29
CACNA1A-242ENST00000637485 LOC100131303A0A0U1RQF7 123 aa7.01□□□□□ -1.29
CACNA1A-242ENST00000637485 DEFB114Q30KQ6 69 aa7.01□□□□□ -1.29
CACNA1A-242ENST00000637485 ATG2AQ2TAZ0 1938 aa7.01□□□□□ -1.29
CACNA1A-242ENST00000637485 ATP11AUNQ6ZP68 121 aa7□□□□□ -1.29
CACNA1A-242ENST00000637485 AMELXQ99217 191 aa7□□□□□ -1.29
CACNA1A-242ENST00000637485 PSMG3-AS1Q96PY0 264 aa7□□□□□ -1.29
CACNA1A-242ENST00000637485 IGHV6-1A0A0B4J1U7 121 aa7□□□□□ -1.29
CACNA1A-242ENST00000637485 RPL37AP8A6NKH3 93 aa7□□□□□ -1.29
CACNA1A-242ENST00000637485 SMIM29Q86T20 159 aa7□□□□□ -1.29
CACNA1A-242ENST00000637485 MUC6Q6W4X9 2439 aa7□□□□□ -1.29
CACNA1A-242ENST00000637485 CYSRT1A8MQ03 144 aa7□□□□□ -1.29
CACNA1A-242ENST00000637485 EGFEM1PQ0D2K5 195 aa7□□□□□ -1.29
CACNA1A-242ENST00000637485 PRR9Q5T870 116 aa7□□□□□ -1.29
CACNA1A-242ENST00000637485 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7□□□□□ -1.29
CACNA1A-242ENST00000637485 ACYP2P14621 99 aa6.99□□□□□ -1.29
CACNA1A-242ENST00000637485 MDFIQ99750 246 aa6.99□□□□□ -1.29
CACNA1A-242ENST00000637485 IGLV9-49A0A0B4J1Y8 123 aa6.99□□□□□ -1.29
CACNA1A-242ENST00000637485 KTN1-AS1Q86SY8 53 aa6.99□□□□□ -1.29
CACNA1A-242ENST00000637485 LELP1Q5T871 98 aa6.98□□□□□ -1.29
CACNA1A-242ENST00000637485 LCA10Q71F78 164 aa6.98□□□□□ -1.29
CACNA1A-242ENST00000637485 SPINK1P00995 79 aa6.98□□□□□ -1.29
CACNA1A-242ENST00000637485 C11orf45Q8TAV5 145 aa6.98□□□□□ -1.29
CACNA1A-242ENST00000637485 TP53AIP1Q9HCN2 124 aa6.98□□□□□ -1.29
CACNA1A-242ENST00000637485 Q9UF83 564 aa6.98□□□□□ -1.29
CACNA1A-242ENST00000637485 A0A1B0GW54 56 aa6.97□□□□□ -1.29
CACNA1A-242ENST00000637485 Q6ZTC4 211 aa6.97□□□□□ -1.29
CACNA1A-242ENST00000637485 C7orf65Q6ZTY9 151 aa6.97□□□□□ -1.29
CACNA1A-242ENST00000637485 ZNF702PQ9H963 129 aa6.97□□□□□ -1.29
CACNA1A-242ENST00000637485 IGLV2-18A0A075B6J9 118 aa6.97□□□□□ -1.29
CACNA1A-242ENST00000637485 LINC01561Q8N1V8 128 aa6.97□□□□□ -1.29
CACNA1A-242ENST00000637485 LINC00336Q6ZUF6 198 aa6.97□□□□□ -1.29
CACNA1A-242ENST00000637485 C7orf33Q8WU49 177 aa6.97□□□□□ -1.29
CACNA1A-242ENST00000637485 ANKHD1Q8IWZ3 2542 aaKnown RBP6.96□□□□□ -1.29
CACNA1A-242ENST00000637485 MED13LQ71F56 2210 aa6.96□□□□□ -1.29
CACNA1A-242ENST00000637485 A0A087WSZ3 146 aa6.96□□□□□ -1.29
CACNA1A-242ENST00000637485 WIPF1O43516 503 aa6.96□□□□□ -1.29
CACNA1A-242ENST00000637485 IGLV1-40P01703 118 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms