RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 LAMA3Q16787 3333 aa11.55□□□□□ -0.56
CLN5-218ENST00000637397 LRRK2Q5S007 2527 aa11.54□□□□□ -0.56
CLN5-218ENST00000637397 HIGD2BQ4VC39 106 aa11.54□□□□□ -0.56
CLN5-218ENST00000637397 RMI2Q96E14 147 aa11.54□□□□□ -0.56
CLN5-218ENST00000637397 CDC42SE2Q9NRR3 84 aa11.54□□□□□ -0.56
CLN5-218ENST00000637397 H3BQ85 93 aa11.54□□□□□ -0.56
CLN5-218ENST00000637397 COX7BP24311 80 aa11.53□□□□□ -0.56
CLN5-218ENST00000637397 PDE6GP18545 87 aa11.53□□□□□ -0.56
CLN5-218ENST00000637397 CHCHD7Q9BUK0 85 aa11.53□□□□□ -0.56
CLN5-218ENST00000637397 CHD9Q3L8U1 2897 aa11.53□□□□□ -0.56
CLN5-218ENST00000637397 AMELXQ99217 191 aa11.52□□□□□ -0.57
CLN5-218ENST00000637397 XAGE1AQ9HD64 81 aa11.52□□□□□ -0.57
CLN5-218ENST00000637397 LINC01546A6NGU7 62 aa11.52□□□□□ -0.57
CLN5-218ENST00000637397 Q6Q795 121 aa11.52□□□□□ -0.57
CLN5-218ENST00000637397 CDIP1Q9H305 208 aa11.52□□□□□ -0.57
CLN5-218ENST00000637397 KIF25-AS1Q9Y6Z4 181 aa11.52□□□□□ -0.57
CLN5-218ENST00000637397 SMIM1B2RUZ4 78 aa11.52□□□□□ -0.57
CLN5-218ENST00000637397 COX6A2Q02221 97 aa11.52□□□□□ -0.57
CLN5-218ENST00000637397 DOPEY1Q5JWR5 2465 aa11.52□□□□□ -0.57
CLN5-218ENST00000637397 PRB2P02812 416 aaPredicted RBP11.51□□□□□ -0.57
CLN5-218ENST00000637397 COL4A2P08572 1712 aa11.51□□□□□ -0.57
CLN5-218ENST00000637397 FAM240AA0A1B0GVK7 77 aa11.51□□□□□ -0.57
CLN5-218ENST00000637397 SCXQ7RTU7 201 aa11.51□□□□□ -0.57
CLN5-218ENST00000637397 USP17L23D6RBM5 183 aa11.51□□□□□ -0.57
CLN5-218ENST00000637397 CCL18P55774 89 aa11.51□□□□□ -0.57
CLN5-218ENST00000637397 LINC00694P0DN24 101 aa11.5□□□□□ -0.57
CLN5-218ENST00000637397 BBC3Q96PG8 261 aaPredicted RBP11.5□□□□□ -0.57
CLN5-218ENST00000637397 LINC00526Q96FQ7 95 aa11.49□□□□□ -0.57
CLN5-218ENST00000637397 LINC00959A0A1B0GUT2 108 aa11.49□□□□□ -0.57
CLN5-218ENST00000637397 ODF3L2Q3SX64 289 aa11.49□□□□□ -0.57
CLN5-218ENST00000637397 LINC00482Q8N8I6 264 aa11.48□□□□□ -0.57
CLN5-218ENST00000637397 CFAP54Q96N23 3096 aa11.48□□□□□ -0.57
CLN5-218ENST00000637397 SMCPP49901 116 aaPredicted RBP11.48□□□□□ -0.57
CLN5-218ENST00000637397 Q6ZSN1 163 aa11.48□□□□□ -0.57
CLN5-218ENST00000637397 SERP2Q8N6R1 65 aa11.48□□□□□ -0.57
CLN5-218ENST00000637397 COX7CP15954 63 aa11.48□□□□□ -0.57
CLN5-218ENST00000637397 ATP5EP2Q5VTU8 51 aa11.47□□□□□ -0.57
CLN5-218ENST00000637397 LINC00315P59091 139 aa11.46□□□□□ -0.58
CLN5-218ENST00000637397 PRO0461Q9UI25 63 aa11.46□□□□□ -0.58
CLN5-218ENST00000637397 LYRM9A8MSI8 78 aa11.45□□□□□ -0.58
CLN5-218ENST00000637397 SMIM9A6NGZ8 99 aa11.45□□□□□ -0.58
CLN5-218ENST00000637397 Q6ZQY7 126 aa11.45□□□□□ -0.58
CLN5-218ENST00000637397 BRI3O95415 125 aa11.45□□□□□ -0.58
CLN5-218ENST00000637397 FAM110AQ9BQ89 295 aa11.45□□□□□ -0.58
CLN5-218ENST00000637397 BPY2O14599 106 aa11.44□□□□□ -0.58
CLN5-218ENST00000637397 LRRC75A-AS1Q8N1F1 130 aa11.44□□□□□ -0.58
CLN5-218ENST00000637397 CD164L2Q6UWJ8 174 aa11.44□□□□□ -0.58
CLN5-218ENST00000637397 UNC80Q8N2C7 3258 aa11.43□□□□□ -0.58
CLN5-218ENST00000637397 WFDC9Q8NEX5 89 aa11.43□□□□□ -0.58
CLN5-218ENST00000637397 PCSK5Q92824 1860 aa11.43□□□□□ -0.58
CLN5-218ENST00000637397 FAM236DA0A1B0GTK5 79 aa11.43□□□□□ -0.58
CLN5-218ENST00000637397 FAM236CP0DP71 79 aa11.43□□□□□ -0.58
CLN5-218ENST00000637397 LINC01006Q8NI28 216 aa11.43□□□□□ -0.58
CLN5-218ENST00000637397 RPL28P46779 137 aaKnown RBP11.42□□□□□ -0.58
CLN5-218ENST00000637397 C1orf158Q8N1D5 194 aa11.42□□□□□ -0.58
CLN5-218ENST00000637397 IGLV4-60A0A075B6I1 120 aa11.41□□□□□ -0.58
CLN5-218ENST00000637397 A0A087WVE0 104 aa11.41□□□□□ -0.58
CLN5-218ENST00000637397 A0A087WYN8 130 aa11.4□□□□□ -0.59
CLN5-218ENST00000637397 MP68P56378 58 aa11.39□□□□□ -0.59
CLN5-218ENST00000637397 Q6JHZ5 121 aa11.38□□□□□ -0.59
CLN5-218ENST00000637397 PRR3P79522 188 aaKnown RBP11.38□□□□□ -0.59
CLN5-218ENST00000637397 Q8IZM0 81 aa11.38□□□□□ -0.59
CLN5-218ENST00000637397 NDUFS5O43920 106 aa11.37□□□□□ -0.59
CLN5-218ENST00000637397 CCKP06307 115 aa11.37□□□□□ -0.59
CLN5-218ENST00000637397 CSDC2Q9Y534 153 aaKnown RBP11.37□□□□□ -0.59
CLN5-218ENST00000637397 BEAN1Q3B7T3 259 aa11.37□□□□□ -0.59
CLN5-218ENST00000637397 SNURFQ9Y675 71 aa11.37□□□□□ -0.59
CLN5-218ENST00000637397 M0QXV9 152 aa11.37□□□□□ -0.59
CLN5-218ENST00000637397 FAM19A4Q96LR4 140 aa11.36□□□□□ -0.59
CLN5-218ENST00000637397 A0A087WZ39 114 aa11.36□□□□□ -0.59
CLN5-218ENST00000637397 C9orf116Q5BN46 136 aaPredicted RBP11.36□□□□□ -0.59
CLN5-218ENST00000637397 BRK1Q8WUW1 75 aa11.36□□□□□ -0.59
CLN5-218ENST00000637397 NDUFC2O95298 119 aa11.35□□□□□ -0.59
CLN5-218ENST00000637397 C5orf47Q569G3 176 aa11.35□□□□□ -0.59
CLN5-218ENST00000637397 ZNF462Q96JM2 2506 aa11.35□□□□□ -0.59
CLN5-218ENST00000637397 ACANP16112 2415 aa11.35□□□□□ -0.59
CLN5-218ENST00000637397 C3orf84H3BNL1 204 aa11.34□□□□□ -0.59
CLN5-218ENST00000637397 Q9UF83 564 aa11.33□□□□□ -0.6
CLN5-218ENST00000637397 MPLKIPQ8TAP9 179 aa11.33□□□□□ -0.6
CLN5-218ENST00000637397 MIFP14174 115 aa11.32□□□□□ -0.6
CLN5-218ENST00000637397 KRTAP10-9P60411 292 aa11.32□□□□□ -0.6
CLN5-218ENST00000637397 UNQ6190/PRO20217Q6UXQ8 127 aa11.32□□□□□ -0.6
CLN5-218ENST00000637397 CYSRT1A8MQ03 144 aa11.32□□□□□ -0.6
CLN5-218ENST00000637397 COX17Q14061 63 aa11.32□□□□□ -0.6
CLN5-218ENST00000637397 NTM-AS1Q6ZSK4 140 aa11.32□□□□□ -0.6
CLN5-218ENST00000637397 IGKV2-24A0A0C4DH68 120 aa11.32□□□□□ -0.6
CLN5-218ENST00000637397 Q8N814 137 aa11.32□□□□□ -0.6
CLN5-218ENST00000637397 LINC00337Q8N6G1 96 aa11.31□□□□□ -0.6
CLN5-218ENST00000637397 KLK5Q9Y337 293 aaPredicted RBP11.31□□□□□ -0.6
CLN5-218ENST00000637397 IGKV2-28A0A075B6P5 120 aa11.31□□□□□ -0.6
CLN5-218ENST00000637397 IGKV2D-28P01615 120 aa11.31□□□□□ -0.6
CLN5-218ENST00000637397 Q8N2B8 174 aa11.31□□□□□ -0.6
CLN5-218ENST00000637397 HIGD2AQ9BW72 106 aa11.31□□□□□ -0.6
CLN5-218ENST00000637397 ANKRD17O75179 2603 aaKnown RBP11.3□□□□□ -0.6
CLN5-218ENST00000637397 C11orf45Q8TAV5 145 aa11.3□□□□□ -0.6
CLN5-218ENST00000637397 TRANK1O15050 2925 aa11.3□□□□□ -0.6
CLN5-218ENST00000637397 NDUFB1O75438 58 aa11.29□□□□□ -0.6
CLN5-218ENST00000637397 FHL2Q14192 279 aa11.29□□□□□ -0.6
CLN5-218ENST00000637397 SYCNQ0VAF6 134 aa11.29□□□□□ -0.6
CLN5-218ENST00000637397 PRUNE2Q8WUY3 3088 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms