RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 AP5S1Q9NUS5 200 aa10.51□□□□□ -0.73
CACNA1A-229ENST00000636670 LRP1Q07954 4544 aaKnown RBP10.5□□□□□ -0.73
CACNA1A-229ENST00000636670 IGHV1-58A0A0C4DH39 117 aa10.5□□□□□ -0.73
CACNA1A-229ENST00000636670 Q6ZN92 141 aa10.5□□□□□ -0.73
CACNA1A-229ENST00000636670 TEX43Q6ZNM6 134 aa10.5□□□□□ -0.73
CACNA1A-229ENST00000636670 C18orf32Q8TCD1 76 aa10.5□□□□□ -0.73
CACNA1A-229ENST00000636670 TOMM6Q96B49 74 aa10.5□□□□□ -0.73
CACNA1A-229ENST00000636670 TIMM17AQ99595 171 aa10.5□□□□□ -0.73
CACNA1A-229ENST00000636670 OPRPNQ99935 248 aaPredicted RBP10.5□□□□□ -0.73
CACNA1A-229ENST00000636670 DNAH8Q96JB1 4490 aa10.49□□□□□ -0.73
CACNA1A-229ENST00000636670 Q6ZSA8 131 aa10.49□□□□□ -0.73
CACNA1A-229ENST00000636670 C2orf88Q9BSF0 95 aa10.49□□□□□ -0.73
CACNA1A-229ENST00000636670 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.48□□□□□ -0.73
CACNA1A-229ENST00000636670 IGIPA6NJ69 53 aa10.48□□□□□ -0.73
CACNA1A-229ENST00000636670 COX7A2LO14548 114 aa10.48□□□□□ -0.73
CACNA1A-229ENST00000636670 PLA2G1BP04054 148 aaKnown RBP10.48□□□□□ -0.73
CACNA1A-229ENST00000636670 HAMPP81172 84 aa10.48□□□□□ -0.73
CACNA1A-229ENST00000636670 PAPPA-AS1Q5QFB9 102 aa10.48□□□□□ -0.73
CACNA1A-229ENST00000636670 C9orf163Q8N9P6 203 aa10.48□□□□□ -0.73
CACNA1A-229ENST00000636670 HIGD2BQ4VC39 106 aa10.47□□□□□ -0.73
CACNA1A-229ENST00000636670 LINC00173Q6ZV60 143 aa10.47□□□□□ -0.73
CACNA1A-229ENST00000636670 AMELXQ99217 191 aa10.47□□□□□ -0.73
CACNA1A-229ENST00000636670 MALP21145 153 aa10.46□□□□□ -0.73
CACNA1A-229ENST00000636670 LINC01620Q4KN68 170 aa10.46□□□□□ -0.73
CACNA1A-229ENST00000636670 ERASQ7Z444 233 aa10.46□□□□□ -0.73
CACNA1A-229ENST00000636670 UBE2D1P51668 147 aa10.45□□□□□ -0.74
CACNA1A-229ENST00000636670 IGHV3OR16-9A0A0B4J2B5 98 aa10.44□□□□□ -0.74
CACNA1A-229ENST00000636670 APOMO95445 188 aa10.44□□□□□ -0.74
CACNA1A-229ENST00000636670 OXTP01178 125 aa10.44□□□□□ -0.74
CACNA1A-229ENST00000636670 RAB5BP61020 215 aa10.44□□□□□ -0.74
CACNA1A-229ENST00000636670 URB1-AS1Q96HZ7 61 aa10.44□□□□□ -0.74
CACNA1A-229ENST00000636670 SCGB3A1Q96QR1 104 aa10.44□□□□□ -0.74
CACNA1A-229ENST00000636670 VCX2Q9H322 139 aa10.44□□□□□ -0.74
CACNA1A-229ENST00000636670 SLPIP03973 132 aa10.43□□□□□ -0.74
CACNA1A-229ENST00000636670 LINC00614P0C842 121 aa10.43□□□□□ -0.74
CACNA1A-229ENST00000636670 LINC00242Q5T6M2 205 aa10.43□□□□□ -0.74
CACNA1A-229ENST00000636670 FAM19A3Q7Z5A8 133 aa10.43□□□□□ -0.74
CACNA1A-229ENST00000636670 C5orf38Q86SI9 138 aa10.43□□□□□ -0.74
CACNA1A-229ENST00000636670 FAM30AQ9NZY2 134 aa10.43□□□□□ -0.74
CACNA1A-229ENST00000636670 IGHV3-64A0A075B6Q5 118 aa10.42□□□□□ -0.74
CACNA1A-229ENST00000636670 ZNF561-AS1K7EIQ3 104 aa10.42□□□□□ -0.74
CACNA1A-229ENST00000636670 HBDP02042 147 aa10.42□□□□□ -0.74
CACNA1A-229ENST00000636670 OR10D4PQ8NGN7 298 aa10.42□□□□□ -0.74
CACNA1A-229ENST00000636670 A0A096LNJ9 63 aa10.41□□□□□ -0.74
CACNA1A-229ENST00000636670 SEC11AP67812 179 aa10.41□□□□□ -0.74
CACNA1A-229ENST00000636670 FAT3Q8TDW7 4589 aa10.4□□□□□ -0.74
CACNA1A-229ENST00000636670 A0A087WZ39 114 aa10.4□□□□□ -0.74
CACNA1A-229ENST00000636670 SPAG11BQ08648 103 aa10.4□□□□□ -0.74
CACNA1A-229ENST00000636670 ZC2HC1BQ5TFG8 222 aa10.4□□□□□ -0.74
CACNA1A-229ENST00000636670 CARD19Q96LW7 228 aa10.4□□□□□ -0.74
CACNA1A-229ENST00000636670 PKIGQ9Y2B9 76 aa10.4□□□□□ -0.74
CACNA1A-229ENST00000636670 COLCA2A8K830 154 aa10.39□□□□□ -0.75
CACNA1A-229ENST00000636670 TRGC2P03986 189 aa10.39□□□□□ -0.75
CACNA1A-229ENST00000636670 LINC01561Q8N1V8 128 aa10.39□□□□□ -0.75
CACNA1A-229ENST00000636670 ORAOV1Q8WV07 137 aa10.39□□□□□ -0.75
CACNA1A-229ENST00000636670 CHCHD1Q96BP2 118 aaKnown RBP10.39□□□□□ -0.75
CACNA1A-229ENST00000636670 C2orf48Q96LS8 159 aa10.39□□□□□ -0.75
CACNA1A-229ENST00000636670 IGLV4-69A0A075B6H9 119 aa10.38□□□□□ -0.75
CACNA1A-229ENST00000636670 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.38□□□□□ -0.75
CACNA1A-229ENST00000636670 HERVK_113P63121 156 aa10.38□□□□□ -0.75
CACNA1A-229ENST00000636670 SDIM1Q6ZPB5 146 aa10.38□□□□□ -0.75
CACNA1A-229ENST00000636670 SCXQ7RTU7 201 aa10.38□□□□□ -0.75
CACNA1A-229ENST00000636670 CHAC1Q9BUX1 264 aa10.38□□□□□ -0.75
CACNA1A-229ENST00000636670 F8WDY8 70 aa10.37□□□□□ -0.75
CACNA1A-229ENST00000636670 COX6A2Q02221 97 aa10.37□□□□□ -0.75
CACNA1A-229ENST00000636670 SYCNQ0VAF6 134 aa10.37□□□□□ -0.75
CACNA1A-229ENST00000636670 LINC00526Q96FQ7 95 aa10.37□□□□□ -0.75
CACNA1A-229ENST00000636670 SCO1O75880 301 aa10.36□□□□□ -0.75
CACNA1A-229ENST00000636670 CIRBPQ14011 172 aaKnown RBP10.36□□□□□ -0.75
CACNA1A-229ENST00000636670 PMVKQ15126 192 aa10.36□□□□□ -0.75
CACNA1A-229ENST00000636670 PMCHL1Q16048 86 aa10.36□□□□□ -0.75
CACNA1A-229ENST00000636670 PDZD11Q5EBL8 140 aa10.36□□□□□ -0.75
CACNA1A-229ENST00000636670 CAMK2N2Q96S95 79 aa10.36□□□□□ -0.75
CACNA1A-229ENST00000636670 ATP5LO75964 103 aa10.35□□□□□ -0.75
CACNA1A-229ENST00000636670 LINC00528Q8N1L1 170 aa10.35□□□□□ -0.75
CACNA1A-229ENST00000636670 GEMIN7Q9H840 131 aaKnown RBP10.35□□□□□ -0.75
CACNA1A-229ENST00000636670 LRP2P98164 4655 aa10.34□□□□□ -0.75
CACNA1A-229ENST00000636670 A0A0J9YXV3 536 aa10.34□□□□□ -0.75
CACNA1A-229ENST00000636670 TINCRA0A1B0GVN0 87 aa10.34□□□□□ -0.75
CACNA1A-229ENST00000636670 Q6ZRU5 148 aa10.34□□□□□ -0.75
CACNA1A-229ENST00000636670 BAGE3Q86Y29 109 aa10.34□□□□□ -0.75
CACNA1A-229ENST00000636670 CST9LQ9H4G1 147 aa10.34□□□□□ -0.75
CACNA1A-229ENST00000636670 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.34□□□□□ -0.75
CACNA1A-229ENST00000636670 IGLV5-45A0A087WSX0 123 aa10.33□□□□□ -0.76
CACNA1A-229ENST00000636670 HSBP1O75506 76 aa10.33□□□□□ -0.76
CACNA1A-229ENST00000636670 CIRBP-AS1Q8TBR5 109 aa10.33□□□□□ -0.76
CACNA1A-229ENST00000636670 SPACA4Q8TDM5 124 aa10.33□□□□□ -0.76
CACNA1A-229ENST00000636670 NDUFA1O15239 70 aa10.32□□□□□ -0.76
CACNA1A-229ENST00000636670 PACRGQ96M98 296 aaPredicted RBP10.32□□□□□ -0.76
CACNA1A-229ENST00000636670 MRPL35Q9NZE8 188 aaKnown RBP10.32□□□□□ -0.76
CACNA1A-229ENST00000636670 CDKN2A-AS1Q9UH64 79 aa10.32□□□□□ -0.76
CACNA1A-229ENST00000636670 PANO1I0J062 215 aa10.31□□□□□ -0.76
CACNA1A-229ENST00000636670 KIAA0087Q14695 138 aa10.31□□□□□ -0.76
CACNA1A-229ENST00000636670 RNF151Q2KHN1 245 aa10.31□□□□□ -0.76
CACNA1A-229ENST00000636670 LINC00469Q8N7U9 141 aa10.31□□□□□ -0.76
CACNA1A-229ENST00000636670 LOC107984640A0A0U1RRK4 108 aa10.3□□□□□ -0.76
CACNA1A-229ENST00000636670 CHTF8P0CG12 524 aa10.3□□□□□ -0.76
CACNA1A-229ENST00000636670 IGLC3P0DOY3 106 aa10.3□□□□□ -0.76
CACNA1A-229ENST00000636670 A0A096LNI7 61 aa10.29□□□□□ -0.76
CACNA1A-229ENST00000636670 SERF1AO75920 110 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms