RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 IFITM10A6NMD0 228 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 I3L3M4 83 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 TCL1BO95988 128 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 CD3DP04234 171 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 RAB5AP20339 215 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 FCER1GP30273 86 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 RPL29P47914 159 aaKnown RBP0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 FHITP49789 147 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 TAS2R45P59539 299 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 KRTAP12-2P59991 146 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 KRTAP10-7P60409 375 aaPredicted RBP0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 RAB5BP61020 215 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 RAB14P61106 215 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 RPL24P83731 157 aaKnown RBP0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 DNLZQ5SXM8 178 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 TMEM136Q6ZRR5 245 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 Q6ZUT4 128 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 C5orf17Q8NAS9 161 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 PYDC1Q8WXC3 89 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 ANP32BQ92688 251 aaKnown RBP0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 ZNF625Q96I27 306 aaPredicted RBP0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 ATP6V1G3Q96LB4 118 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 GGACTQ9BVM4 153 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 NDUFB11Q9NX14 153 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 GSKIPQ9P0R6 139 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 ANAPC10Q9UM13 185 aa0.69□□□□□ -2.3
SYNGAP1-215ENST00000636443 SYNE1Q8NF91 8797 aaKnown RBP0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 SDHAF1A6NFY7 115 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 DISC1C4P0D8 188 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 PTGES3LE9PB15 166 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 F8VRH5 84 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 H0YAA0 97 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 HPGDSO60760 199 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 RAB3DO95716 219 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 TRGC1P0CF51 173 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 SMCPP49901 116 aaPredicted RBP0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 SULT1A1P50225 295 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 HBBP68871 147 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 S100A12P80511 92 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 RAB32Q13637 225 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 KIAA0087Q14695 138 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 UBE2NLQ5JXB2 153 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 LCE5AQ5TCM9 118 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 FAAP20Q6NZ36 180 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 SLC25A34Q6PIV7 304 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 TMEM14EPQ6UXP3 125 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 MRPL52Q86TS9 123 aaKnown RBP0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 SAMD12Q8N8I0 201 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 GATD1Q8NB37 220 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 RPL39LQ96EH5 51 aaKnown RBP0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 SMIM8Q96KF7 97 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 RTBDNQ9BSG5 229 aaPredicted RBP0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 SPRR2GQ9BYE4 73 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 KCNIP2Q9NS61 270 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 WDR83OSQ9Y284 106 aa0.68□□□□□ -2.3
SYNGAP1-215ENST00000636443 TRAV9-1A0A075B6T8 112 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 A0A1W2PPV4 95 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 C17orf112F2Z3M2 114 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 PRYO14603 147 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 HMGB3O15347 200 aaKnown RBP0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 IFNA1P01562 189 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 KRTAP12-4P60329 112 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 SUMO2P61956 95 aaKnown RBP0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 UBE2G1P62253 170 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 HBG1P69891 147 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 HBG2P69892 147 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 MLLT11Q13015 90 aaPredicted RBP0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 LCA10Q71F78 164 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 NOTCH2NLQ7Z3S9 236 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 KRTAP19-3Q7Z4W3 81 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 THAP6Q8TBB0 222 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 TMEM18Q96B42 140 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 SCGB3A2Q96PL1 93 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 C9orf16Q9BUW7 83 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 TIMM21Q9BVV7 248 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 NPCDR1Q9BY65 106 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 PRO1933Q9H354 126 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 MCUBQ9NWR8 336 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 LAMTOR3Q9UHA4 124 aa0.67□□□□□ -2.3
SYNGAP1-215ENST00000636443 TRDV1A0A1B0GX56 115 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 ANKRD20A5PA0PJZ0 165 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 IGSF23A1L1A6 192 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 A8MUU9 505 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 FAM25AB3EWG3 89 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 FAM25CB3EWG5 89 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 FAM25GB3EWG6 89 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 SNAI2O43623 268 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 CXCL1P09341 107 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 VPREB1P12018 145 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 PDE6GP18545 87 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 SDC2P34741 201 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 PFN2P35080 140 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 CXCL5P42830 114 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 CRIP1P50238 77 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 SUMO1P63165 101 aaKnown RBP0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 MT1XP80297 61 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 CD164Q04900 197 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 C1orf146Q5VVC0 180 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 ZFP1Q6P2D0 407 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 PP632Q6XCG6 107 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms