RNA–Protein interactions for RNA: ENST00000636340.1

GABRA1-213, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-213ENST00000636340 UBE2WQ96B02 151 aa4.46□□□□□ -1.69
GABRA1-213ENST00000636340 CITED2Q99967 270 aaPredicted RBP4.46□□□□□ -1.69
GABRA1-213ENST00000636340 YAE1D1Q9NRH1 226 aa4.46□□□□□ -1.69
GABRA1-213ENST00000636340 ANK3Q12955 4377 aaKnown RBP4.46□□□□□ -1.69
GABRA1-213ENST00000636340 NF1P21359 2839 aa4.46□□□□□ -1.7
GABRA1-213ENST00000636340 IGHV3OR16-12A0A075B7B8 117 aa4.46□□□□□ -1.7
GABRA1-213ENST00000636340 NPC2P61916 151 aa4.46□□□□□ -1.7
GABRA1-213ENST00000636340 C2orf82Q6UX34 121 aa4.46□□□□□ -1.7
GABRA1-213ENST00000636340 FAM19A3Q7Z5A8 133 aa4.46□□□□□ -1.7
GABRA1-213ENST00000636340 TEX29Q8N6K0 151 aa4.46□□□□□ -1.7
GABRA1-213ENST00000636340 CLEC2BQ92478 149 aa4.46□□□□□ -1.7
GABRA1-213ENST00000636340 LINC01587Q99440 93 aa4.46□□□□□ -1.7
GABRA1-213ENST00000636340 KRTAP3-1Q9BYR8 98 aa4.46□□□□□ -1.7
GABRA1-213ENST00000636340 TRAV8-4A0A0B4J246 113 aa4.45□□□□□ -1.7
GABRA1-213ENST00000636340 Q6Q795 121 aa4.45□□□□□ -1.7
GABRA1-213ENST00000636340 DAND5Q8N907 189 aa4.45□□□□□ -1.7
GABRA1-213ENST00000636340 SETD2Q9BYW2 2564 aaPredicted RBP4.45□□□□□ -1.7
GABRA1-213ENST00000636340 COX6CP09669 75 aa4.45□□□□□ -1.7
GABRA1-213ENST00000636340 IGHV4-31P0DP07 118 aa4.45□□□□□ -1.7
GABRA1-213ENST00000636340 DEFB114Q30KQ6 69 aa4.45□□□□□ -1.7
GABRA1-213ENST00000636340 LINC00242Q5T6M2 205 aa4.45□□□□□ -1.7
GABRA1-213ENST00000636340 LINC00308Q8TCZ7 52 aa4.45□□□□□ -1.7
GABRA1-213ENST00000636340 SMR3AQ99954 134 aa4.45□□□□□ -1.7
GABRA1-213ENST00000636340 ANAPC13Q9BS18 74 aa4.45□□□□□ -1.7
GABRA1-213ENST00000636340 SNCGO76070 127 aa4.44□□□□□ -1.7
GABRA1-213ENST00000636340 INSP01308 110 aa4.44□□□□□ -1.7
GABRA1-213ENST00000636340 LINC00694P0DN24 101 aa4.44□□□□□ -1.7
GABRA1-213ENST00000636340 NDUFV3P56181 108 aaKnown RBP4.44□□□□□ -1.7
GABRA1-213ENST00000636340 GAGE2BQ13066 116 aa4.44□□□□□ -1.7
GABRA1-213ENST00000636340 GAGE2EQ4V326 116 aa4.44□□□□□ -1.7
GABRA1-213ENST00000636340 C4orf3Q8WVX3 66 aa4.44□□□□□ -1.7
GABRA1-213ENST00000636340 GAGE2DQ9UEU5 116 aa4.44□□□□□ -1.7
GABRA1-213ENST00000636340 JMJD1CQ15652 2540 aa4.44□□□□□ -1.7
GABRA1-213ENST00000636340 NSD1Q96L73 2696 aaPredicted RBP4.44□□□□□ -1.7
GABRA1-213ENST00000636340 FAM240AA0A1B0GVK7 77 aa4.44□□□□□ -1.7
GABRA1-213ENST00000636340 SMIM1B2RUZ4 78 aa4.44□□□□□ -1.7
GABRA1-213ENST00000636340 SOSTDC1Q6X4U4 206 aa4.44□□□□□ -1.7
GABRA1-213ENST00000636340 NTM-AS1Q6ZSK4 140 aa4.44□□□□□ -1.7
GABRA1-213ENST00000636340 C1orf158Q8N1D5 194 aa4.44□□□□□ -1.7
GABRA1-213ENST00000636340 C15orf53Q8NAA6 179 aa4.44□□□□□ -1.7
GABRA1-213ENST00000636340 ZNF625Q96I27 306 aaPredicted RBP4.44□□□□□ -1.7
GABRA1-213ENST00000636340 CSDC2Q9Y534 153 aaKnown RBP4.44□□□□□ -1.7
GABRA1-213ENST00000636340 FN1P02751 2386 aaKnown RBP4.43□□□□□ -1.7
GABRA1-213ENST00000636340 F5H768 121 aa4.43□□□□□ -1.7
GABRA1-213ENST00000636340 NDUFA7O95182 113 aa4.43□□□□□ -1.7
GABRA1-213ENST00000636340 HERVK_113P63121 156 aa4.43□□□□□ -1.7
GABRA1-213ENST00000636340 MRPL23Q16540 153 aaKnown RBP4.43□□□□□ -1.7
GABRA1-213ENST00000636340 ODF3L2Q3SX64 289 aa4.43□□□□□ -1.7
GABRA1-213ENST00000636340 Q9H8V8 135 aa4.43□□□□□ -1.7
GABRA1-213ENST00000636340 GAGE5Q13069 117 aa4.42□□□□□ -1.7
GABRA1-213ENST00000636340 GAGE6Q13070 117 aa4.42□□□□□ -1.7
GABRA1-213ENST00000636340 HIVEP2P31629 2446 aa4.42□□□□□ -1.7
GABRA1-213ENST00000636340 TRBV10-1A0A0K0K1A3 114 aa4.42□□□□□ -1.7
GABRA1-213ENST00000636340 CIRBPQ14011 172 aaKnown RBP4.42□□□□□ -1.7
GABRA1-213ENST00000636340 DYNLRB2Q8TF09 96 aa4.42□□□□□ -1.7
GABRA1-213ENST00000636340 PPDPFQ9H3Y8 114 aa4.42□□□□□ -1.7
GABRA1-213ENST00000636340 CDC42SE2Q9NRR3 84 aa4.42□□□□□ -1.7
GABRA1-213ENST00000636340 XCL2Q9UBD3 114 aa4.42□□□□□ -1.7
GABRA1-213ENST00000636340 COX7A2LO14548 114 aa4.41□□□□□ -1.7
GABRA1-213ENST00000636340 TRGV1A0A0A0MS02 117 aa4.41□□□□□ -1.7
GABRA1-213ENST00000636340 USP17L23D6RBM5 183 aa4.41□□□□□ -1.7
GABRA1-213ENST00000636340 K7EQD1 137 aa4.41□□□□□ -1.7
GABRA1-213ENST00000636340 DAZ2Q13117 558 aaKnown RBP4.41□□□□□ -1.7
GABRA1-213ENST00000636340 TTC32Q5I0X7 151 aa4.41□□□□□ -1.7
GABRA1-213ENST00000636340 Q6ZTI0 123 aa4.41□□□□□ -1.7
GABRA1-213ENST00000636340 DAZ4Q86SG3 579 aaKnown RBP4.41□□□□□ -1.7
GABRA1-213ENST00000636340 DAZ3Q9NR90 486 aaKnown RBP4.41□□□□□ -1.7
GABRA1-213ENST00000636340 C22orf24Q9Y442 160 aa4.41□□□□□ -1.7
GABRA1-213ENST00000636340 TRAV13-1A0A0B4J241 112 aa4.4□□□□□ -1.7
GABRA1-213ENST00000636340 TRAV25A0A0B4J276 109 aa4.4□□□□□ -1.7
GABRA1-213ENST00000636340 TRBV7-7A0A0K0K1E9 115 aa4.4□□□□□ -1.7
GABRA1-213ENST00000636340 CCDC179H3BU77 68 aa4.4□□□□□ -1.7
GABRA1-213ENST00000636340 RPL36AP83881 106 aaKnown RBP4.4□□□□□ -1.7
GABRA1-213ENST00000636340 RPL36ALQ969Q0 106 aaKnown RBP4.4□□□□□ -1.7
GABRA1-213ENST00000636340 A0A0U1RRA0 63 aa4.4□□□□□ -1.71
GABRA1-213ENST00000636340 GIG44P09565 113 aaPredicted RBP4.4□□□□□ -1.71
GABRA1-213ENST00000636340 HERV-K104P63124 156 aa4.4□□□□□ -1.71
GABRA1-213ENST00000636340 PRIMA1Q86XR5 153 aa4.4□□□□□ -1.71
GABRA1-213ENST00000636340 LRRC75A-AS1Q8N1F1 130 aa4.4□□□□□ -1.71
GABRA1-213ENST00000636340 PLAC8L1A1L4L8 177 aa4.39□□□□□ -1.71
GABRA1-213ENST00000636340 GAGE12JA6NER3 117 aa4.39□□□□□ -1.71
GABRA1-213ENST00000636340 GAGE7O76087 117 aa4.39□□□□□ -1.71
GABRA1-213ENST00000636340 TRACP01848 142 aa4.39□□□□□ -1.71
GABRA1-213ENST00000636340 GAGE12FP0CL80 117 aa4.39□□□□□ -1.71
GABRA1-213ENST00000636340 GAGE12GP0CL81 117 aa4.39□□□□□ -1.71
GABRA1-213ENST00000636340 GAGE12IP0CL82 117 aa4.39□□□□□ -1.71
GABRA1-213ENST00000636340 GAGE4Q13068 117 aa4.39□□□□□ -1.71
GABRA1-213ENST00000636340 SDIM1Q6ZPB5 146 aa4.39□□□□□ -1.71
GABRA1-213ENST00000636340 STHQ8IWL8 128 aa4.39□□□□□ -1.71
GABRA1-213ENST00000636340 COPS9Q8WXC6 57 aa4.39□□□□□ -1.71
GABRA1-213ENST00000636340 LINC00476Q8WZB0 136 aa4.39□□□□□ -1.71
GABRA1-213ENST00000636340 FAM218AQ96MZ4 157 aa4.39□□□□□ -1.71
GABRA1-213ENST00000636340 KRTAP4-8Q9BYQ9 185 aa4.39□□□□□ -1.71
GABRA1-213ENST00000636340 SS18L2Q9UHA2 77 aa4.39□□□□□ -1.71
GABRA1-213ENST00000636340 KRTAP1-1Q07627 177 aa4.38□□□□□ -1.71
GABRA1-213ENST00000636340 ACYP1P07311 99 aa4.38□□□□□ -1.71
GABRA1-213ENST00000636340 MEIG1Q5JSS6 88 aa4.38□□□□□ -1.71
GABRA1-213ENST00000636340 TMEM86BQ8N661 226 aa4.38□□□□□ -1.71
GABRA1-213ENST00000636340 SMCR5Q8TEV8 140 aa4.38□□□□□ -1.71
GABRA1-213ENST00000636340 IGKV2-28A0A075B6P5 120 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms