RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 KLK5Q9Y337 293 aaPredicted RBP10.49□□□□□ -0.73
CACNA1A-220ENST00000635988 A0A087WYN8 130 aa10.48□□□□□ -0.73
CACNA1A-220ENST00000635988 IBA57-AS1B1ANH7 110 aa10.48□□□□□ -0.73
CACNA1A-220ENST00000635988 FSHBP01225 129 aa10.48□□□□□ -0.73
CACNA1A-220ENST00000635988 CREBBPQ92793 2442 aa10.48□□□□□ -0.73
CACNA1A-220ENST00000635988 CSPG4Q6UVK1 2322 aa10.48□□□□□ -0.73
CACNA1A-220ENST00000635988 SMIM9A6NGZ8 99 aa10.47□□□□□ -0.73
CACNA1A-220ENST00000635988 ODF3L2Q3SX64 289 aa10.47□□□□□ -0.73
CACNA1A-220ENST00000635988 C14orf132Q9NPU4 83 aa10.47□□□□□ -0.73
CACNA1A-220ENST00000635988 TOMM7Q9P0U1 55 aa10.47□□□□□ -0.73
CACNA1A-220ENST00000635988 CCL18P55774 89 aa10.47□□□□□ -0.73
CACNA1A-220ENST00000635988 RPS28P62857 69 aaKnown RBP10.46□□□□□ -0.73
CACNA1A-220ENST00000635988 KHDC1LQ5JSQ8 128 aa10.46□□□□□ -0.73
CACNA1A-220ENST00000635988 A0A096LNT2 108 aa10.45□□□□□ -0.74
CACNA1A-220ENST00000635988 LOC107984640A0A0U1RRK4 108 aa10.45□□□□□ -0.74
CACNA1A-220ENST00000635988 FAM19A5Q7Z5A7 132 aaPredicted RBP10.44□□□□□ -0.74
CACNA1A-220ENST00000635988 TRBV6-4A0A1B0GX49 114 aa10.44□□□□□ -0.74
CACNA1A-220ENST00000635988 LECT2O14960 151 aa10.44□□□□□ -0.74
CACNA1A-220ENST00000635988 LINC00846Q9NV44 126 aa10.44□□□□□ -0.74
CACNA1A-220ENST00000635988 IGHV3OR16-9A0A0B4J2B5 98 aa10.43□□□□□ -0.74
CACNA1A-220ENST00000635988 SERP2Q8N6R1 65 aa10.43□□□□□ -0.74
CACNA1A-220ENST00000635988 WIPF1O43516 503 aa10.43□□□□□ -0.74
CACNA1A-220ENST00000635988 C9orf129Q5T035 196 aaKnown RBP10.43□□□□□ -0.74
CACNA1A-220ENST00000635988 NOP10Q9NPE3 64 aaKnown RBP10.43□□□□□ -0.74
CACNA1A-220ENST00000635988 A0A087WZ39 114 aa10.42□□□□□ -0.74
CACNA1A-220ENST00000635988 PAX4O43316 350 aa10.42□□□□□ -0.74
CACNA1A-220ENST00000635988 OR13C6PQ8NH95 151 aa10.42□□□□□ -0.74
CACNA1A-220ENST00000635988 ORMDL1Q9P0S3 153 aa10.42□□□□□ -0.74
CACNA1A-220ENST00000635988 IGKV3D-7A0A0C4DH55 119 aa10.42□□□□□ -0.74
CACNA1A-220ENST00000635988 hADV29S1A0JD25 119 aa10.41□□□□□ -0.74
CACNA1A-220ENST00000635988 S100A7L2Q5SY68 101 aa10.41□□□□□ -0.74
CACNA1A-220ENST00000635988 C16orf74Q96GX8 76 aa10.41□□□□□ -0.74
CACNA1A-220ENST00000635988 TRGV2A0A075B6R0 118 aa10.41□□□□□ -0.74
CACNA1A-220ENST00000635988 TMEM258P61165 79 aa10.41□□□□□ -0.74
CACNA1A-220ENST00000635988 LY6G6DO95868 133 aa10.4□□□□□ -0.74
CACNA1A-220ENST00000635988 IGKV3OR2-268A0A0C4DH90 116 aa10.4□□□□□ -0.75
CACNA1A-220ENST00000635988 PFN2P35080 140 aa10.4□□□□□ -0.75
CACNA1A-220ENST00000635988 CMC4P56277 68 aaPredicted RBP10.4□□□□□ -0.75
CACNA1A-220ENST00000635988 TRBV6-8A0A0A6YYG3 113 aa10.39□□□□□ -0.75
CACNA1A-220ENST00000635988 NCR3O14931 201 aa10.39□□□□□ -0.75
CACNA1A-220ENST00000635988 CCKP06307 115 aa10.39□□□□□ -0.75
CACNA1A-220ENST00000635988 MAPK1IP1LQ8NDC0 245 aa10.39□□□□□ -0.75
CACNA1A-220ENST00000635988 COL12A1Q99715 3063 aa10.38□□□□□ -0.75
CACNA1A-220ENST00000635988 TRGV4A0A0C4DH28 118 aa10.38□□□□□ -0.75
CACNA1A-220ENST00000635988 USP17L23D6RBM5 183 aa10.38□□□□□ -0.75
CACNA1A-220ENST00000635988 JMJD7-PLA2G4BH0Y9G9 81 aa10.38□□□□□ -0.75
CACNA1A-220ENST00000635988 IGLV4-60A0A075B6I1 120 aa10.38□□□□□ -0.75
CACNA1A-220ENST00000635988 ATP5EP2Q5VTU8 51 aa10.38□□□□□ -0.75
CACNA1A-220ENST00000635988 LOC100131303A0A0U1RQF7 123 aa10.37□□□□□ -0.75
CACNA1A-220ENST00000635988 LINC01561Q8N1V8 128 aa10.37□□□□□ -0.75
CACNA1A-220ENST00000635988 TMEM86BQ8N661 226 aa10.37□□□□□ -0.75
CACNA1A-220ENST00000635988 IGHV4-31P0DP07 118 aa10.37□□□□□ -0.75
CACNA1A-220ENST00000635988 C6orf226Q5I0X4 101 aa10.37□□□□□ -0.75
CACNA1A-220ENST00000635988 LINC00167Q96N53 147 aa10.37□□□□□ -0.75
CACNA1A-220ENST00000635988 SPG11Q96JI7 2443 aa10.36□□□□□ -0.75
CACNA1A-220ENST00000635988 UPK3BQ9BT76 320 aa10.36□□□□□ -0.75
CACNA1A-220ENST00000635988 VPS13CQ709C8 3753 aa10.36□□□□□ -0.75
CACNA1A-220ENST00000635988 C11orf44Q8N8P7 122 aa10.36□□□□□ -0.75
CACNA1A-220ENST00000635988 PLAC8L1A1L4L8 177 aa10.35□□□□□ -0.75
CACNA1A-220ENST00000635988 A0A087WVE0 104 aa10.35□□□□□ -0.75
CACNA1A-220ENST00000635988 SLPIP03973 132 aa10.35□□□□□ -0.75
CACNA1A-220ENST00000635988 LINC00959A0A1B0GUT2 108 aa10.34□□□□□ -0.75
CACNA1A-220ENST00000635988 TMEM256-PLSCR3K7ERE1 68 aa10.34□□□□□ -0.75
CACNA1A-220ENST00000635988 SS18Q15532 418 aa10.34□□□□□ -0.75
CACNA1A-220ENST00000635988 Q8IZM0 81 aa10.33□□□□□ -0.76
CACNA1A-220ENST00000635988 GIG44P09565 113 aaPredicted RBP10.32□□□□□ -0.76
CACNA1A-220ENST00000635988 DPH3Q96FX2 82 aa10.32□□□□□ -0.76
CACNA1A-220ENST00000635988 A0A1W2PRX2 142 aa10.32□□□□□ -0.76
CACNA1A-220ENST00000635988 CCL24O00175 119 aa10.32□□□□□ -0.76
CACNA1A-220ENST00000635988 FHL2Q14192 279 aa10.32□□□□□ -0.76
CACNA1A-220ENST00000635988 Q8N814 137 aa10.32□□□□□ -0.76
CACNA1A-220ENST00000635988 CYSTM1Q9H1C7 97 aa10.32□□□□□ -0.76
CACNA1A-220ENST00000635988 CRYBG3Q68DQ2 2970 aa10.31□□□□□ -0.76
CACNA1A-220ENST00000635988 NDUFC2O95298 119 aa10.3□□□□□ -0.76
CACNA1A-220ENST00000635988 TRBV10-3A0A0K0K1G6 114 aa10.3□□□□□ -0.76
CACNA1A-220ENST00000635988 LYPD5Q6UWN5 251 aa10.29□□□□□ -0.76
CACNA1A-220ENST00000635988 C11orf68Q9H3H3 251 aaKnown RBP10.28□□□□□ -0.76
CACNA1A-220ENST00000635988 A0A1B0GUV1 79 aa10.28□□□□□ -0.76
CACNA1A-220ENST00000635988 NDUFC2-KCTD14E9PQ53 114 aa10.28□□□□□ -0.76
CACNA1A-220ENST00000635988 COX17Q14061 63 aa10.28□□□□□ -0.76
CACNA1A-220ENST00000635988 UBL5Q9BZL1 73 aa10.28□□□□□ -0.76
CACNA1A-220ENST00000635988 XCL1P47992 114 aa10.27□□□□□ -0.77
CACNA1A-220ENST00000635988 NANOS2P60321 138 aaKnown RBP10.27□□□□□ -0.77
CACNA1A-220ENST00000635988 CSNK1G2-AS1Q8NCQ2 148 aa10.27□□□□□ -0.77
CACNA1A-220ENST00000635988 GHRHP01286 108 aa10.26□□□□□ -0.77
CACNA1A-220ENST00000635988 RPL35AP18077 110 aaKnown RBP10.26□□□□□ -0.77
CACNA1A-220ENST00000635988 KIR2DL5BQ8NHK3 375 aa10.26□□□□□ -0.77
CACNA1A-220ENST00000635988 DOPEY1Q5JWR5 2465 aa10.25□□□□□ -0.77
CACNA1A-220ENST00000635988 BCE1O60756 84 aa10.24□□□□□ -0.77
CACNA1A-220ENST00000635988 CELSR2Q9HCU4 2923 aa10.23□□□□□ -0.77
CACNA1A-220ENST00000635988 HILS1P60008 231 aa10.23□□□□□ -0.77
CACNA1A-220ENST00000635988 NCOR2Q9Y618 2525 aa10.23□□□□□ -0.77
CACNA1A-220ENST00000635988 MAP1AP78559 2803 aaPredicted RBP10.23□□□□□ -0.77
CACNA1A-220ENST00000635988 F8WDY8 70 aa10.23□□□□□ -0.77
CACNA1A-220ENST00000635988 ENHOQ6UWT2 76 aa10.23□□□□□ -0.77
CACNA1A-220ENST00000635988 DSCR8Q96T75 97 aa10.23□□□□□ -0.77
CACNA1A-220ENST00000635988 C19orf73Q9NVV2 129 aa10.23□□□□□ -0.77
CACNA1A-220ENST00000635988 TRAV23DV6A0A075B6W5 121 aa10.22□□□□□ -0.77
CACNA1A-220ENST00000635988 C2CD3Q4AC94 2353 aa10.21□□□□□ -0.77
CACNA1A-220ENST00000635988 CR1P17927 2039 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms