RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 CIDEAO60543 219 aa13.98□□□□□ -0.17
CLN8-208ENST00000635751 UBE2D3P61077 147 aa13.98□□□□□ -0.17
CLN8-208ENST00000635751 UBE2D2P62837 147 aa13.98□□□□□ -0.17
CLN8-208ENST00000635751 TIRAPP58753 221 aa13.97□□□□□ -0.17
CLN8-208ENST00000635751 VPS25Q9BRG1 176 aa13.97□□□□□ -0.17
CLN8-208ENST00000635751 TEX48A0A1B0GUV7 120 aa13.97□□□□□ -0.17
CLN8-208ENST00000635751 RPL24P83731 157 aaKnown RBP13.97□□□□□ -0.17
CLN8-208ENST00000635751 SMAGPQ0VAQ4 97 aa13.96□□□□□ -0.17
CLN8-208ENST00000635751 LYRM7Q5U5X0 104 aa13.96□□□□□ -0.17
CLN8-208ENST00000635751 CSDC2Q9Y534 153 aaKnown RBP13.96□□□□□ -0.17
CLN8-208ENST00000635751 IGLV5-45A0A087WSX0 123 aa13.95□□□□□ -0.18
CLN8-208ENST00000635751 GAGE12JA6NER3 117 aa13.95□□□□□ -0.18
CLN8-208ENST00000635751 SPINK8P0C7L1 97 aa13.95□□□□□ -0.18
CLN8-208ENST00000635751 GAGE4Q13068 117 aa13.95□□□□□ -0.18
CLN8-208ENST00000635751 GAGE5Q13069 117 aa13.95□□□□□ -0.18
CLN8-208ENST00000635751 GAGE13Q4V321 117 aa13.95□□□□□ -0.18
CLN8-208ENST00000635751 PRO1854Q9UHT4 67 aa13.95□□□□□ -0.18
CLN8-208ENST00000635751 A4D1N5 150 aa13.94□□□□□ -0.18
CLN8-208ENST00000635751 NTM-AS1Q6ZSK4 140 aa13.94□□□□□ -0.18
CLN8-208ENST00000635751 C11orf45Q8TAV5 145 aa13.94□□□□□ -0.18
CLN8-208ENST00000635751 NDUFA12Q9UI09 145 aa13.94□□□□□ -0.18
CLN8-208ENST00000635751 STAB2Q8WWQ8 2551 aa13.94□□□□□ -0.18
CLN8-208ENST00000635751 FBN3Q75N90 2809 aa13.94□□□□□ -0.18
CLN8-208ENST00000635751 LOC107984156A0A0G2JMH3 177 aa13.94□□□□□ -0.18
CLN8-208ENST00000635751 MUSTN1Q8IVN3 82 aa13.94□□□□□ -0.18
CLN8-208ENST00000635751 ARL17AQ8IVW1 177 aa13.94□□□□□ -0.18
CLN8-208ENST00000635751 LINC00694P0DN24 101 aa13.93□□□□□ -0.18
CLN8-208ENST00000635751 NANOS2P60321 138 aaKnown RBP13.93□□□□□ -0.18
CLN8-208ENST00000635751 GTSF1LQ9H1H1 148 aa13.93□□□□□ -0.18
CLN8-208ENST00000635751 TRBV6-4A0A1B0GX49 114 aa13.92□□□□□ -0.18
CLN8-208ENST00000635751 HERVK_113P63121 156 aa13.92□□□□□ -0.18
CLN8-208ENST00000635751 ZFAND6Q6FIF0 208 aa13.92□□□□□ -0.18
CLN8-208ENST00000635751 FAM19A3Q7Z5A8 133 aa13.92□□□□□ -0.18
CLN8-208ENST00000635751 LITAFQ99732 161 aa13.92□□□□□ -0.18
CLN8-208ENST00000635751 CDKN2A-AS1Q9UH64 79 aa13.92□□□□□ -0.18
CLN8-208ENST00000635751 A0A0B4J2C4 111 aa13.92□□□□□ -0.18
CLN8-208ENST00000635751 FHL2Q14192 279 aa13.92□□□□□ -0.18
CLN8-208ENST00000635751 WFDC2Q14508 124 aa13.92□□□□□ -0.18
CLN8-208ENST00000635751 PRO0461Q9UI25 63 aa13.92□□□□□ -0.18
CLN8-208ENST00000635751 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.91□□□□□ -0.18
CLN8-208ENST00000635751 TRGV4A0A0C4DH28 118 aa13.91□□□□□ -0.18
CLN8-208ENST00000635751 ATP5G1P05496 136 aa13.91□□□□□ -0.18
CLN8-208ENST00000635751 Q6ZTC4 211 aa13.9□□□□□ -0.18
CLN8-208ENST00000635751 SPANXDQ9BXN6 97 aa13.9□□□□□ -0.18
CLN8-208ENST00000635751 SPANXCQ9NY87 97 aa13.9□□□□□ -0.18
CLN8-208ENST00000635751 HTN3P15516 51 aa13.9□□□□□ -0.18
CLN8-208ENST00000635751 PSMB2P49721 201 aa13.89□□□□□ -0.19
CLN8-208ENST00000635751 LINC00242Q5T6M2 205 aa13.89□□□□□ -0.19
CLN8-208ENST00000635751 SFTA2Q6UW10 78 aa13.89□□□□□ -0.19
CLN8-208ENST00000635751 TMEM243Q9BU79 118 aa13.89□□□□□ -0.19
CLN8-208ENST00000635751 UBE2L6O14933 153 aa13.88□□□□□ -0.19
CLN8-208ENST00000635751 COX6A2Q02221 97 aa13.88□□□□□ -0.19
CLN8-208ENST00000635751 TMEM101Q96IK0 257 aa13.88□□□□□ -0.19
CLN8-208ENST00000635751 TRBV20-1A0A075B6N2 111 aa13.87□□□□□ -0.19
CLN8-208ENST00000635751 F5H768 121 aa13.87□□□□□ -0.19
CLN8-208ENST00000635751 H7C423 109 aa13.87□□□□□ -0.19
CLN8-208ENST00000635751 CDC42SE2Q9NRR3 84 aa13.87□□□□□ -0.19
CLN8-208ENST00000635751 NDUFA1O15239 70 aa13.87□□□□□ -0.19
CLN8-208ENST00000635751 EIF4EBP3O60516 100 aaPredicted RBP13.87□□□□□ -0.19
CLN8-208ENST00000635751 TIMM17BO60830 172 aa13.87□□□□□ -0.19
CLN8-208ENST00000635751 IGHV3-33P01772 117 aa13.87□□□□□ -0.19
CLN8-208ENST00000635751 MIAQ16674 131 aa13.87□□□□□ -0.19
CLN8-208ENST00000635751 LOC100131303A0A0U1RQF7 123 aa13.86□□□□□ -0.19
CLN8-208ENST00000635751 ERG28Q9UKR5 140 aa13.86□□□□□ -0.19
CLN8-208ENST00000635751 IGLV5-39A0A0G2JS06 123 aa13.85□□□□□ -0.19
CLN8-208ENST00000635751 ADAMTSL4-AS1Q5T5F5 129 aa13.85□□□□□ -0.19
CLN8-208ENST00000635751 MTURNQ8N3F0 131 aa13.85□□□□□ -0.19
CLN8-208ENST00000635751 TRAV13-1A0A0B4J241 112 aa13.85□□□□□ -0.19
CLN8-208ENST00000635751 PRSS2P07478 247 aa13.85□□□□□ -0.19
CLN8-208ENST00000635751 TGP01266 2768 aa13.84□□□□□ -0.19
CLN8-208ENST00000635751 PCP4P48539 62 aa13.84□□□□□ -0.19
CLN8-208ENST00000635751 ETDBQ3ZM63 59 aa13.84□□□□□ -0.19
CLN8-208ENST00000635751 PRO0255Q9UI72 69 aa13.84□□□□□ -0.19
CLN8-208ENST00000635751 TCL1BO95988 128 aa13.83□□□□□ -0.2
CLN8-208ENST00000635751 SCGB1C2P0DMR2 95 aa13.83□□□□□ -0.2
CLN8-208ENST00000635751 SH2D6Q7Z4S9 175 aa13.83□□□□□ -0.2
CLN8-208ENST00000635751 DEFB131BA0A096LNP1 70 aa13.82□□□□□ -0.2
CLN8-208ENST00000635751 J3QR89 54 aa13.82□□□□□ -0.2
CLN8-208ENST00000635751 TRAV26-1A0A087WT03 109 aa13.81□□□□□ -0.2
CLN8-208ENST00000635751 SMIM1B2RUZ4 78 aa13.81□□□□□ -0.2
CLN8-208ENST00000635751 PAX4O43316 350 aa13.81□□□□□ -0.2
CLN8-208ENST00000635751 IFITM1P13164 125 aa13.81□□□□□ -0.2
CLN8-208ENST00000635751 CIRBPQ14011 172 aaKnown RBP13.8□□□□□ -0.2
CLN8-208ENST00000635751 TRAV10A0A0B4J240 114 aa13.79□□□□□ -0.2
CLN8-208ENST00000635751 H7C2G1 150 aa13.79□□□□□ -0.2
CLN8-208ENST00000635751 SMCPP49901 116 aaPredicted RBP13.79□□□□□ -0.2
CLN8-208ENST00000635751 Q1RN00 199 aa13.79□□□□□ -0.2
CLN8-208ENST00000635751 TRBV6-8A0A0A6YYG3 113 aa13.78□□□□□ -0.2
CLN8-208ENST00000635751 GYPEP15421 78 aa13.78□□□□□ -0.2
CLN8-208ENST00000635751 ATP6V0E2Q8NHE4 81 aa13.78□□□□□ -0.2
CLN8-208ENST00000635751 Q9H8V8 135 aa13.78□□□□□ -0.2
CLN8-208ENST00000635751 NPC2P61916 151 aa13.77□□□□□ -0.21
CLN8-208ENST00000635751 GAGE6Q13070 117 aa13.77□□□□□ -0.21
CLN8-208ENST00000635751 DNAH7Q8WXX0 4024 aa13.76□□□□□ -0.21
CLN8-208ENST00000635751 TRBV30A0A0K0K1B3 111 aa13.76□□□□□ -0.21
CLN8-208ENST00000635751 CHCHD5Q9BSY4 110 aa13.75□□□□□ -0.21
CLN8-208ENST00000635751 ZNF625Q96I27 306 aaPredicted RBP13.74□□□□□ -0.21
CLN8-208ENST00000635751 HERV-K104P63124 156 aa13.74□□□□□ -0.21
CLN8-208ENST00000635751 DAND5Q8N907 189 aa13.74□□□□□ -0.21
CLN8-208ENST00000635751 COPS9Q8WXC6 57 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms