RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 DAZ4Q86SG3 579 aaKnown RBP9.99□□□□□ -0.81
LINC00339-208ENST00000634934 DEFB104AQ8WTQ1 72 aa9.99□□□□□ -0.81
LINC00339-208ENST00000634934 DAZ3Q9NR90 486 aaKnown RBP9.99□□□□□ -0.81
LINC00339-208ENST00000634934 RNF151Q2KHN1 245 aa9.98□□□□□ -0.81
LINC00339-208ENST00000634934 RYR3Q15413 4870 aa9.98□□□□□ -0.81
LINC00339-208ENST00000634934 LYRM7Q5U5X0 104 aa9.97□□□□□ -0.81
LINC00339-208ENST00000634934 GTSF1LQ9H1H1 148 aa9.97□□□□□ -0.81
LINC00339-208ENST00000634934 I3L3M4 83 aa9.97□□□□□ -0.81
LINC00339-208ENST00000634934 J3QR89 54 aa9.97□□□□□ -0.81
LINC00339-208ENST00000634934 ESRGQ1W209 222 aa9.97□□□□□ -0.81
LINC00339-208ENST00000634934 LYPD5Q6UWN5 251 aa9.97□□□□□ -0.81
LINC00339-208ENST00000634934 PYGO1Q9Y3Y4 419 aa9.97□□□□□ -0.81
LINC00339-208ENST00000634934 SACSQ9NZJ4 4579 aa9.97□□□□□ -0.81
LINC00339-208ENST00000634934 ZNF815PA8K554 130 aa9.96□□□□□ -0.82
LINC00339-208ENST00000634934 K7ERJ3 54 aa9.96□□□□□ -0.82
LINC00339-208ENST00000634934 CCL18P55774 89 aa9.95□□□□□ -0.82
LINC00339-208ENST00000634934 C20orf203Q8NBC4 194 aa9.94□□□□□ -0.82
LINC00339-208ENST00000634934 PRO0461Q9UI25 63 aa9.94□□□□□ -0.82
LINC00339-208ENST00000634934 SCGB1A1P11684 91 aa9.93□□□□□ -0.82
LINC00339-208ENST00000634934 UBE2DNLQ8IWF7 75 aa9.93□□□□□ -0.82
LINC00339-208ENST00000634934 AMELXQ99217 191 aa9.93□□□□□ -0.82
LINC00339-208ENST00000634934 NAA38Q9BRA0 125 aaKnown RBP9.93□□□□□ -0.82
LINC00339-208ENST00000634934 LINC00588Q9Y4M8 146 aa9.93□□□□□ -0.82
LINC00339-208ENST00000634934 ALMS1Q8TCU4 4167 aa9.93□□□□□ -0.82
LINC00339-208ENST00000634934 HYDINQ4G0P3 5121 aa9.93□□□□□ -0.82
LINC00339-208ENST00000634934 TRBV6-8A0A0A6YYG3 113 aa9.92□□□□□ -0.82
LINC00339-208ENST00000634934 TIRAPP58753 221 aa9.92□□□□□ -0.82
LINC00339-208ENST00000634934 LELP1Q5T871 98 aa9.92□□□□□ -0.82
LINC00339-208ENST00000634934 NTM-AS1Q6ZSK4 140 aa9.92□□□□□ -0.82
LINC00339-208ENST00000634934 RYR2Q92736 4967 aa9.92□□□□□ -0.82
LINC00339-208ENST00000634934 M0QXV9 152 aa9.92□□□□□ -0.82
LINC00339-208ENST00000634934 LEPROTO15243 131 aa9.92□□□□□ -0.82
LINC00339-208ENST00000634934 SCGB1D4Q6XE38 83 aa9.92□□□□□ -0.82
LINC00339-208ENST00000634934 DNAH1Q9P2D7 4330 aa9.91□□□□□ -0.82
LINC00339-208ENST00000634934 TRBV20-1A0A075B6N2 111 aa9.91□□□□□ -0.82
LINC00339-208ENST00000634934 PLEKHB2Q96CS7 222 aa9.91□□□□□ -0.82
LINC00339-208ENST00000634934 TMEM223A0PJW6 202 aa9.9□□□□□ -0.82
LINC00339-208ENST00000634934 IGHV3-30P01768 117 aa9.9□□□□□ -0.82
LINC00339-208ENST00000634934 IGHV3-30-5P0DP03 117 aa9.9□□□□□ -0.82
LINC00339-208ENST00000634934 CHCHD5Q9BSY4 110 aa9.9□□□□□ -0.82
LINC00339-208ENST00000634934 J3QQQ9 107 aa9.89□□□□□ -0.83
LINC00339-208ENST00000634934 SRSF9Q13242 221 aaKnown RBP eCLIP9.89□□□□□ -0.83
LINC00339-208ENST00000634934 TMEM243Q9BU79 118 aa9.89□□□□□ -0.83
LINC00339-208ENST00000634934 LCE6AA0A183 80 aa9.88□□□□□ -0.83
LINC00339-208ENST00000634934 H3BMG7 143 aa9.88□□□□□ -0.83
LINC00339-208ENST00000634934 RPL39P62891 51 aaKnown RBP9.88□□□□□ -0.83
LINC00339-208ENST00000634934 WFDC10BQ8IUB3 73 aa9.88□□□□□ -0.83
LINC00339-208ENST00000634934 LINC01600Q96MT4 127 aa9.88□□□□□ -0.83
LINC00339-208ENST00000634934 CHCHD7Q9BUK0 85 aa9.88□□□□□ -0.83
LINC00339-208ENST00000634934 PGPEP1Q9NXJ5 209 aa9.88□□□□□ -0.83
LINC00339-208ENST00000634934 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.87□□□□□ -0.83
LINC00339-208ENST00000634934 IGKV2-29A2NJV5 120 aaPredicted RBP9.87□□□□□ -0.83
LINC00339-208ENST00000634934 TMEM262E9PQX1 116 aa9.87□□□□□ -0.83
LINC00339-208ENST00000634934 UBE2L6O14933 153 aa9.87□□□□□ -0.83
LINC00339-208ENST00000634934 MRPS36P82909 103 aaKnown RBP9.87□□□□□ -0.83
LINC00339-208ENST00000634934 GAGE6Q13070 117 aa9.87□□□□□ -0.83
LINC00339-208ENST00000634934 VCX2Q9H322 139 aa9.87□□□□□ -0.83
LINC00339-208ENST00000634934 IGLV4-3A0A075B6K6 122 aa9.87□□□□□ -0.83
LINC00339-208ENST00000634934 A0A0B4J2C4 111 aa9.87□□□□□ -0.83
LINC00339-208ENST00000634934 LY6G6CO95867 125 aa9.87□□□□□ -0.83
LINC00339-208ENST00000634934 LGALS3P17931 250 aaKnown RBP9.87□□□□□ -0.83
LINC00339-208ENST00000634934 C10orf126Q8N4M7 172 aa9.87□□□□□ -0.83
LINC00339-208ENST00000634934 SPANXA1Q9NS26 97 aa9.87□□□□□ -0.83
LINC00339-208ENST00000634934 TSPAN13O95857 204 aa9.86□□□□□ -0.83
LINC00339-208ENST00000634934 RPL24P83731 157 aaKnown RBP9.86□□□□□ -0.83
LINC00339-208ENST00000634934 C21orf62-AS1Q17RA5 79 aa9.86□□□□□ -0.83
LINC00339-208ENST00000634934 LINC00476Q8WZB0 136 aa9.86□□□□□ -0.83
LINC00339-208ENST00000634934 UPK3BQ9BT76 320 aa9.86□□□□□ -0.83
LINC00339-208ENST00000634934 ZNF22P17026 224 aaPredicted RBP9.85□□□□□ -0.83
LINC00339-208ENST00000634934 TSPEAR-AS2P59090 65 aa9.85□□□□□ -0.83
LINC00339-208ENST00000634934 WFDC2Q14508 124 aa9.85□□□□□ -0.83
LINC00339-208ENST00000634934 TMEM170BQ5T4T1 132 aa9.85□□□□□ -0.83
LINC00339-208ENST00000634934 Q9H8V8 135 aa9.85□□□□□ -0.83
LINC00339-208ENST00000634934 VPS13DQ5THJ4 4388 aa9.85□□□□□ -0.83
LINC00339-208ENST00000634934 KMT2AQ03164 3969 aa9.84□□□□□ -0.83
LINC00339-208ENST00000634934 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.84□□□□□ -0.83
LINC00339-208ENST00000634934 TMEM238C9JI98 176 aa9.84□□□□□ -0.83
LINC00339-208ENST00000634934 IGHV3-33P01772 117 aa9.84□□□□□ -0.83
LINC00339-208ENST00000634934 IGHV3-30-3P0DP02 117 aa9.84□□□□□ -0.83
LINC00339-208ENST00000634934 TIMM21Q9BVV7 248 aa9.84□□□□□ -0.83
LINC00339-208ENST00000634934 CFC1BP0CG36 223 aa9.83□□□□□ -0.84
LINC00339-208ENST00000634934 CFC1P0CG37 223 aa9.83□□□□□ -0.84
LINC00339-208ENST00000634934 Q8N3U1 123 aa9.83□□□□□ -0.84
LINC00339-208ENST00000634934 PRO1854Q9UHT4 67 aa9.83□□□□□ -0.84
LINC00339-208ENST00000634934 TINCRA0A1B0GVN0 87 aa9.82□□□□□ -0.84
LINC00339-208ENST00000634934 H7C423 109 aa9.82□□□□□ -0.84
LINC00339-208ENST00000634934 TIMM17BO60830 172 aa9.82□□□□□ -0.84
LINC00339-208ENST00000634934 FAM104AQ969W3 186 aa9.82□□□□□ -0.84
LINC00339-208ENST00000634934 SIGMAR1Q99720 223 aa9.82□□□□□ -0.84
LINC00339-208ENST00000634934 GAGE12HA6NDE8 117 aa9.81□□□□□ -0.84
LINC00339-208ENST00000634934 DNAH10OSP0CZ25 163 aa9.81□□□□□ -0.84
LINC00339-208ENST00000634934 ETDBQ3ZM63 59 aa9.81□□□□□ -0.84
LINC00339-208ENST00000634934 LINC01556Q5JQF7 62 aa9.81□□□□□ -0.84
LINC00339-208ENST00000634934 DGAT2L7PQ6IED9 249 aa9.81□□□□□ -0.84
LINC00339-208ENST00000634934 FAM19A3Q7Z5A8 133 aa9.81□□□□□ -0.84
LINC00339-208ENST00000634934 TMEM101Q96IK0 257 aa9.81□□□□□ -0.84
LINC00339-208ENST00000634934 SPANXDQ9BXN6 97 aa9.81□□□□□ -0.84
LINC00339-208ENST00000634934 SPANXCQ9NY87 97 aa9.81□□□□□ -0.84
LINC00339-208ENST00000634934 IGLV5-45A0A087WSX0 123 aa9.8□□□□□ -0.84
LINC00339-208ENST00000634934 A0A0J9YXY3 114 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms