RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 PYGO1Q9Y3Y4 419 aa10.04□□□□□ -0.8
SNRNP48-203ENST00000634363 IFITM10A6NMD0 228 aa10.03□□□□□ -0.8
SNRNP48-203ENST00000634363 CD164L2Q6UWJ8 174 aa10.03□□□□□ -0.8
SNRNP48-203ENST00000634363 Q6ZN92 141 aa10.03□□□□□ -0.8
SNRNP48-203ENST00000634363 TMEM141Q96I45 108 aa10.03□□□□□ -0.8
SNRNP48-203ENST00000634363 OPRPNQ99935 248 aaPredicted RBP10.03□□□□□ -0.8
SNRNP48-203ENST00000634363 AP5S1Q9NUS5 200 aa10.03□□□□□ -0.8
SNRNP48-203ENST00000634363 IGLV4-3A0A075B6K6 122 aa10.01□□□□□ -0.81
SNRNP48-203ENST00000634363 TEX43Q6ZNM6 134 aa10.01□□□□□ -0.81
SNRNP48-203ENST00000634363 C2orf88Q9BSF0 95 aa10.01□□□□□ -0.81
SNRNP48-203ENST00000634363 DNAH8Q96JB1 4490 aa10□□□□□ -0.81
SNRNP48-203ENST00000634363 COX7A2LO14548 114 aa10□□□□□ -0.81
SNRNP48-203ENST00000634363 NPSP0C0P6 89 aa10□□□□□ -0.81
SNRNP48-203ENST00000634363 MALP21145 153 aa10□□□□□ -0.81
SNRNP48-203ENST00000634363 HNRNPA3P51991 378 aaKnown RBP10□□□□□ -0.81
SNRNP48-203ENST00000634363 C15orf56Q8N910 161 aa10□□□□□ -0.81
SNRNP48-203ENST00000634363 C18orf32Q8TCD1 76 aa10□□□□□ -0.81
SNRNP48-203ENST00000634363 FAM104AQ969W3 186 aa10□□□□□ -0.81
SNRNP48-203ENST00000634363 TOMM6Q96B49 74 aa10□□□□□ -0.81
SNRNP48-203ENST00000634363 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.99□□□□□ -0.81
SNRNP48-203ENST00000634363 IGHV1-58A0A0C4DH39 117 aa9.99□□□□□ -0.81
SNRNP48-203ENST00000634363 LINC01546A6NGU7 62 aa9.99□□□□□ -0.81
SNRNP48-203ENST00000634363 LINC01549A6NIU2 74 aa9.99□□□□□ -0.81
SNRNP48-203ENST00000634363 HIGD2BQ4VC39 106 aa9.99□□□□□ -0.81
SNRNP48-203ENST00000634363 PAPPA-AS1Q5QFB9 102 aa9.99□□□□□ -0.81
SNRNP48-203ENST00000634363 GVQW2A0A096LPI5 108 aaPredicted RBP9.98□□□□□ -0.81
SNRNP48-203ENST00000634363 IGIPA6NJ69 53 aa9.98□□□□□ -0.81
SNRNP48-203ENST00000634363 TIMM17AQ99595 171 aa9.98□□□□□ -0.81
SNRNP48-203ENST00000634363 VCX2Q9H322 139 aa9.98□□□□□ -0.81
SNRNP48-203ENST00000634363 RAB5BP61020 215 aa9.97□□□□□ -0.81
SNRNP48-203ENST00000634363 CNBPP62633 177 aaKnown RBP9.97□□□□□ -0.81
SNRNP48-203ENST00000634363 SCGB3A1Q96QR1 104 aa9.97□□□□□ -0.81
SNRNP48-203ENST00000634363 APOMO95445 188 aa9.96□□□□□ -0.82
SNRNP48-203ENST00000634363 LINC00614P0C842 121 aa9.96□□□□□ -0.82
SNRNP48-203ENST00000634363 ERASQ7Z444 233 aa9.96□□□□□ -0.82
SNRNP48-203ENST00000634363 C5orf38Q86SI9 138 aa9.96□□□□□ -0.82
SNRNP48-203ENST00000634363 DPH3Q96FX2 82 aa9.96□□□□□ -0.82
SNRNP48-203ENST00000634363 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.96□□□□□ -0.82
SNRNP48-203ENST00000634363 LRP1Q07954 4544 aaKnown RBP9.95□□□□□ -0.82
SNRNP48-203ENST00000634363 ZNF561-AS1K7EIQ3 104 aa9.95□□□□□ -0.82
SNRNP48-203ENST00000634363 C9orf163Q8N9P6 203 aa9.95□□□□□ -0.82
SNRNP48-203ENST00000634363 AMELXQ99217 191 aa9.95□□□□□ -0.82
SNRNP48-203ENST00000634363 PANO1I0J062 215 aa9.94□□□□□ -0.82
SNRNP48-203ENST00000634363 UBE2D1P51668 147 aa9.94□□□□□ -0.82
SNRNP48-203ENST00000634363 ZC2HC1BQ5TFG8 222 aa9.94□□□□□ -0.82
SNRNP48-203ENST00000634363 LINC00173Q6ZV60 143 aa9.94□□□□□ -0.82
SNRNP48-203ENST00000634363 IGHV3OR16-9A0A0B4J2B5 98 aa9.93□□□□□ -0.82
SNRNP48-203ENST00000634363 HBDP02042 147 aa9.93□□□□□ -0.82
SNRNP48-203ENST00000634363 TRGC2P03986 189 aa9.93□□□□□ -0.82
SNRNP48-203ENST00000634363 LINC00242Q5T6M2 205 aa9.93□□□□□ -0.82
SNRNP48-203ENST00000634363 IGHV3-64A0A075B6Q5 118 aa9.92□□□□□ -0.82
SNRNP48-203ENST00000634363 SLPIP03973 132 aa9.92□□□□□ -0.82
SNRNP48-203ENST00000634363 SDIM1Q6ZPB5 146 aa9.92□□□□□ -0.82
SNRNP48-203ENST00000634363 URB1-AS1Q96HZ7 61 aa9.92□□□□□ -0.82
SNRNP48-203ENST00000634363 COLCA2A8K830 154 aa9.91□□□□□ -0.82
SNRNP48-203ENST00000634363 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.91□□□□□ -0.82
SNRNP48-203ENST00000634363 SEC11AP67812 179 aa9.91□□□□□ -0.82
SNRNP48-203ENST00000634363 LINC00526Q96FQ7 95 aa9.91□□□□□ -0.82
SNRNP48-203ENST00000634363 CARD19Q96LW7 228 aa9.91□□□□□ -0.82
SNRNP48-203ENST00000634363 IGLV4-69A0A075B6H9 119 aa9.9□□□□□ -0.82
SNRNP48-203ENST00000634363 SCO1O75880 301 aa9.9□□□□□ -0.82
SNRNP48-203ENST00000634363 SPAG11BQ08648 103 aa9.9□□□□□ -0.82
SNRNP48-203ENST00000634363 PMCHL1Q16048 86 aa9.9□□□□□ -0.82
SNRNP48-203ENST00000634363 BAGE3Q86Y29 109 aa9.9□□□□□ -0.82
SNRNP48-203ENST00000634363 OR10D4PQ8NGN7 298 aa9.9□□□□□ -0.82
SNRNP48-203ENST00000634363 ORAOV1Q8WV07 137 aa9.9□□□□□ -0.82
SNRNP48-203ENST00000634363 CHCHD1Q96BP2 118 aaKnown RBP9.9□□□□□ -0.82
SNRNP48-203ENST00000634363 A0A087WZ39 114 aa9.89□□□□□ -0.83
SNRNP48-203ENST00000634363 A0A096LNJ9 63 aa9.89□□□□□ -0.83
SNRNP48-203ENST00000634363 MT1HL1P0DM35 61 aa9.89□□□□□ -0.83
SNRNP48-203ENST00000634363 HERVK_113P63121 156 aa9.89□□□□□ -0.83
SNRNP48-203ENST00000634363 COX6A2Q02221 97 aa9.89□□□□□ -0.83
SNRNP48-203ENST00000634363 SYCNQ0VAF6 134 aa9.89□□□□□ -0.83
SNRNP48-203ENST00000634363 Q6ZRU5 148 aa9.89□□□□□ -0.83
SNRNP48-203ENST00000634363 GEMIN7Q9H840 131 aaKnown RBP9.89□□□□□ -0.83
SNRNP48-203ENST00000634363 PKIGQ9Y2B9 76 aa9.89□□□□□ -0.83
SNRNP48-203ENST00000634363 PMVKQ15126 192 aa9.88□□□□□ -0.83
SNRNP48-203ENST00000634363 FAM19A3Q7Z5A8 133 aa9.88□□□□□ -0.83
SNRNP48-203ENST00000634363 CAMK2N2Q96S95 79 aa9.88□□□□□ -0.83
SNRNP48-203ENST00000634363 ATP5LO75964 103 aa9.87□□□□□ -0.83
SNRNP48-203ENST00000634363 C2orf48Q96LS8 159 aa9.87□□□□□ -0.83
SNRNP48-203ENST00000634363 PACRGQ96M98 296 aaPredicted RBP9.87□□□□□ -0.83
SNRNP48-203ENST00000634363 CST9LQ9H4G1 147 aa9.87□□□□□ -0.83
SNRNP48-203ENST00000634363 A0A0J9YXV3 536 aa9.86□□□□□ -0.83
SNRNP48-203ENST00000634363 HSBP1O75506 76 aa9.86□□□□□ -0.83
SNRNP48-203ENST00000634363 CHTF8P0CG12 524 aa9.86□□□□□ -0.83
SNRNP48-203ENST00000634363 NDUFA6P56556 154 aa9.86□□□□□ -0.83
SNRNP48-203ENST00000634363 LINC01561Q8N1V8 128 aa9.86□□□□□ -0.83
SNRNP48-203ENST00000634363 A0A087WYN8 130 aa9.85□□□□□ -0.83
SNRNP48-203ENST00000634363 PDZD11Q5EBL8 140 aa9.85□□□□□ -0.83
SNRNP48-203ENST00000634363 LINC00469Q8N7U9 141 aa9.85□□□□□ -0.83
SNRNP48-203ENST00000634363 TINCRA0A1B0GVN0 87 aa9.84□□□□□ -0.83
SNRNP48-203ENST00000634363 F8WDY8 70 aa9.84□□□□□ -0.83
SNRNP48-203ENST00000634363 CDKN2A-AS1Q9UH64 79 aa9.84□□□□□ -0.83
SNRNP48-203ENST00000634363 NDUFA1O15239 70 aa9.83□□□□□ -0.84
SNRNP48-203ENST00000634363 PRSS2P07478 247 aa9.83□□□□□ -0.84
SNRNP48-203ENST00000634363 IGKV2-24A0A0C4DH68 120 aa9.82□□□□□ -0.84
SNRNP48-203ENST00000634363 SERF1AO75920 110 aa9.82□□□□□ -0.84
SNRNP48-203ENST00000634363 S100A1P23297 94 aa9.82□□□□□ -0.84
SNRNP48-203ENST00000634363 CIRBPQ14011 172 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms