RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 PMCHL1Q16048 86 aa12.62□□□□□ -0.39
CROCCP4-202ENST00000633627 GVQW2A0A096LPI5 108 aaPredicted RBP12.61□□□□□ -0.39
CROCCP4-202ENST00000633627 IGHV1-58A0A0C4DH39 117 aa12.61□□□□□ -0.39
CROCCP4-202ENST00000633627 hDV102S1A0JD36 115 aa12.61□□□□□ -0.39
CROCCP4-202ENST00000633627 PDZD11Q5EBL8 140 aa12.61□□□□□ -0.39
CROCCP4-202ENST00000633627 FAM19A3Q7Z5A8 133 aa12.61□□□□□ -0.39
CROCCP4-202ENST00000633627 C5orf38Q86SI9 138 aa12.61□□□□□ -0.39
CROCCP4-202ENST00000633627 BAGE3Q86Y29 109 aa12.61□□□□□ -0.39
CROCCP4-202ENST00000633627 SLPIP03973 132 aa12.6□□□□□ -0.39
CROCCP4-202ENST00000633627 LINC00310P59036 64 aa12.6□□□□□ -0.39
CROCCP4-202ENST00000633627 COX6A2Q02221 97 aa12.6□□□□□ -0.39
CROCCP4-202ENST00000633627 CNBPP62633 177 aaKnown RBP12.59□□□□□ -0.39
CROCCP4-202ENST00000633627 HIGD2BQ4VC39 106 aa12.59□□□□□ -0.39
CROCCP4-202ENST00000633627 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.58□□□□□ -0.4
CROCCP4-202ENST00000633627 HERC2O95714 4834 aa12.58□□□□□ -0.4
CROCCP4-202ENST00000633627 HSPG2P98160 4391 aa12.58□□□□□ -0.4
CROCCP4-202ENST00000633627 MALP21145 153 aa12.57□□□□□ -0.4
CROCCP4-202ENST00000633627 LINC01620Q4KN68 170 aa12.57□□□□□ -0.4
CROCCP4-202ENST00000633627 C9orf163Q8N9P6 203 aa12.57□□□□□ -0.4
CROCCP4-202ENST00000633627 CST9LQ9H4G1 147 aa12.57□□□□□ -0.4
CROCCP4-202ENST00000633627 A0A087WZ39 114 aa12.56□□□□□ -0.4
CROCCP4-202ENST00000633627 HSBP1O75506 76 aa12.56□□□□□ -0.4
CROCCP4-202ENST00000633627 SERF1AO75920 110 aa12.56□□□□□ -0.4
CROCCP4-202ENST00000633627 PMVKQ15126 192 aa12.56□□□□□ -0.4
CROCCP4-202ENST00000633627 HIST1H2BKO60814 126 aa12.55□□□□□ -0.4
CROCCP4-202ENST00000633627 ATP5LO75964 103 aa12.55□□□□□ -0.4
CROCCP4-202ENST00000633627 HIST1H2BJP06899 126 aa12.55□□□□□ -0.4
CROCCP4-202ENST00000633627 HIST1H2BOP23527 126 aa12.55□□□□□ -0.4
CROCCP4-202ENST00000633627 HIST1H2BBP33778 126 aa12.55□□□□□ -0.4
CROCCP4-202ENST00000633627 HIST1H2BDP58876 126 aa12.55□□□□□ -0.4
CROCCP4-202ENST00000633627 HIST1H2BCP62807 126 aa12.55□□□□□ -0.4
CROCCP4-202ENST00000633627 HIST2H2BEQ16778 126 aa12.55□□□□□ -0.4
CROCCP4-202ENST00000633627 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.55□□□□□ -0.4
CROCCP4-202ENST00000633627 HIST1H2BHQ93079 126 aa12.55□□□□□ -0.4
CROCCP4-202ENST00000633627 HIST1H2BNQ99877 126 aa12.55□□□□□ -0.4
CROCCP4-202ENST00000633627 HIST1H2BMQ99879 126 aa12.55□□□□□ -0.4
CROCCP4-202ENST00000633627 IGHV3-64A0A075B6Q5 118 aa12.54□□□□□ -0.4
CROCCP4-202ENST00000633627 A0A0J9YXV3 536 aa12.54□□□□□ -0.4
CROCCP4-202ENST00000633627 NUPR1O60356 82 aa12.54□□□□□ -0.4
CROCCP4-202ENST00000633627 CDK2AP2O75956 126 aa12.54□□□□□ -0.4
CROCCP4-202ENST00000633627 APOMO95445 188 aa12.54□□□□□ -0.4
CROCCP4-202ENST00000633627 SEC11AP67812 179 aa12.54□□□□□ -0.4
CROCCP4-202ENST00000633627 FAM19A2Q8N3H0 131 aa12.54□□□□□ -0.4
CROCCP4-202ENST00000633627 LINC00526Q96FQ7 95 aa12.54□□□□□ -0.4
CROCCP4-202ENST00000633627 HERVK_113P63121 156 aa12.53□□□□□ -0.4
CROCCP4-202ENST00000633627 LINC01561Q8N1V8 128 aa12.53□□□□□ -0.4
CROCCP4-202ENST00000633627 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.52□□□□□ -0.41
CROCCP4-202ENST00000633627 Q6ZSA8 131 aa12.52□□□□□ -0.41
CROCCP4-202ENST00000633627 FAM30AQ9NZY2 134 aa12.52□□□□□ -0.41
CROCCP4-202ENST00000633627 IGLV4-69A0A075B6H9 119 aa12.51□□□□□ -0.41
CROCCP4-202ENST00000633627 TINCRA0A1B0GVN0 87 aa12.51□□□□□ -0.41
CROCCP4-202ENST00000633627 ZNF561-AS1K7EIQ3 104 aa12.51□□□□□ -0.41
CROCCP4-202ENST00000633627 OR10D4PQ8NGN7 298 aa12.51□□□□□ -0.41
CROCCP4-202ENST00000633627 CDKN2A-AS1Q9UH64 79 aa12.51□□□□□ -0.41
CROCCP4-202ENST00000633627 XGP55808 180 aa12.5□□□□□ -0.41
CROCCP4-202ENST00000633627 SDIM1Q6ZPB5 146 aa12.5□□□□□ -0.41
CROCCP4-202ENST00000633627 ORAOV1Q8WV07 137 aa12.5□□□□□ -0.41
CROCCP4-202ENST00000633627 C2orf48Q96LS8 159 aa12.5□□□□□ -0.41
CROCCP4-202ENST00000633627 GEMIN7Q9H840 131 aaKnown RBP12.5□□□□□ -0.41
CROCCP4-202ENST00000633627 IGLV5-45A0A087WSX0 123 aa12.49□□□□□ -0.41
CROCCP4-202ENST00000633627 SPAG11BQ08648 103 aa12.49□□□□□ -0.41
CROCCP4-202ENST00000633627 IFI27L1Q96BM0 104 aa12.49□□□□□ -0.41
CROCCP4-202ENST00000633627 NDUFA6P56556 154 aa12.48□□□□□ -0.41
CROCCP4-202ENST00000633627 KIAA0087Q14695 138 aa12.48□□□□□ -0.41
CROCCP4-202ENST00000633627 IGLC3P0DOY3 106 aa12.47□□□□□ -0.41
CROCCP4-202ENST00000633627 SYCNQ0VAF6 134 aa12.47□□□□□ -0.41
CROCCP4-202ENST00000633627 LINC00469Q8N7U9 141 aa12.46□□□□□ -0.41
CROCCP4-202ENST00000633627 CARD19Q96LW7 228 aa12.46□□□□□ -0.41
CROCCP4-202ENST00000633627 FAT1Q14517 4588 aa12.45□□□□□ -0.42
CROCCP4-202ENST00000633627 TRAV12-1A0A0B4J245 112 aa12.45□□□□□ -0.42
CROCCP4-202ENST00000633627 LEPROTL1O95214 131 aa12.45□□□□□ -0.42
CROCCP4-202ENST00000633627 COA6Q5JTJ3 125 aaKnown RBP12.45□□□□□ -0.42
CROCCP4-202ENST00000633627 Q6ZRU5 148 aa12.45□□□□□ -0.42
CROCCP4-202ENST00000633627 F8WDY8 70 aa12.44□□□□□ -0.42
CROCCP4-202ENST00000633627 CAMK2N2Q96S95 79 aa12.44□□□□□ -0.42
CROCCP4-202ENST00000633627 CHAC1Q9BUX1 264 aa12.44□□□□□ -0.42
CROCCP4-202ENST00000633627 SMIM1B2RUZ4 78 aa12.42□□□□□ -0.42
CROCCP4-202ENST00000633627 PACRGQ96M98 296 aaPredicted RBP12.42□□□□□ -0.42
CROCCP4-202ENST00000633627 CHTOPQ9Y3Y2 248 aaKnown RBP12.42□□□□□ -0.42
CROCCP4-202ENST00000633627 C11orf86A6NJI1 115 aa12.41□□□□□ -0.42
CROCCP4-202ENST00000633627 PANO1I0J062 215 aa12.41□□□□□ -0.42
CROCCP4-202ENST00000633627 FABP4P15090 132 aa12.41□□□□□ -0.42
CROCCP4-202ENST00000633627 ZNF22P17026 224 aaPredicted RBP12.41□□□□□ -0.42
CROCCP4-202ENST00000633627 HAMPP81172 84 aa12.41□□□□□ -0.42
CROCCP4-202ENST00000633627 KRTAP17-1Q9BYP8 105 aa12.41□□□□□ -0.42
CROCCP4-202ENST00000633627 MRPL35Q9NZE8 188 aaKnown RBP12.41□□□□□ -0.42
CROCCP4-202ENST00000633627 HSPB8Q9UJY1 196 aa12.41□□□□□ -0.42
CROCCP4-202ENST00000633627 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.41□□□□□ -0.42
CROCCP4-202ENST00000633627 NDUFA1O15239 70 aa12.4□□□□□ -0.42
CROCCP4-202ENST00000633627 CIRBPQ14011 172 aaKnown RBP12.4□□□□□ -0.42
CROCCP4-202ENST00000633627 RNF151Q2KHN1 245 aa12.4□□□□□ -0.42
CROCCP4-202ENST00000633627 C10orf25Q5T742 122 aa12.4□□□□□ -0.42
CROCCP4-202ENST00000633627 UNQ6190/PRO20217Q6UXQ8 127 aa12.4□□□□□ -0.42
CROCCP4-202ENST00000633627 Q8IZM0 81 aa12.4□□□□□ -0.42
CROCCP4-202ENST00000633627 F8VRH5 84 aa12.38□□□□□ -0.43
CROCCP4-202ENST00000633627 H3BRM9 83 aa12.38□□□□□ -0.43
CROCCP4-202ENST00000633627 SPINK8P0C7L1 97 aa12.38□□□□□ -0.43
CROCCP4-202ENST00000633627 ODF1Q14990 250 aa12.38□□□□□ -0.43
CROCCP4-202ENST00000633627 C2orf82Q6UX34 121 aa12.38□□□□□ -0.43
CROCCP4-202ENST00000633627 SCXQ7RTU7 201 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms