RNA–Protein interactions for RNA: ENST00000630224.2

TCF4-269, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-269	ENST00000630224	FGF6	P10767	208 aa		4.23	□□□□□ -1.73
TCF4-269	ENST00000630224	ZNF25	P17030	456 aa	Predicted RBP	4.23	□□□□□ -1.73
TCF4-269	ENST00000630224	RPL39	P62891	51 aa	Known RBP	4.23	□□□□□ -1.73
TCF4-269	ENST00000630224	LELP1	Q5T871	98 aa		4.23	□□□□□ -1.73
TCF4-269	ENST00000630224	LYPD5	Q6UWN5	251 aa		4.23	□□□□□ -1.73
TCF4-269	ENST00000630224	PET117	Q6UWS5	81 aa		4.23	□□□□□ -1.73
TCF4-269	ENST00000630224	MRPL52	Q86TS9	123 aa	Known RBP	4.23	□□□□□ -1.73
TCF4-269	ENST00000630224	OR5A1	Q8NGJ0	315 aa		4.23	□□□□□ -1.73
TCF4-269	ENST00000630224	PYGO1	Q9Y3Y4	419 aa		4.23	□□□□□ -1.73
TCF4-269	ENST00000630224	NACA	E9PAV3	2078 aa		4.23	□□□□□ -1.73
TCF4-269	ENST00000630224		A0A087WX48	190 aa		4.22	□□□□□ -1.73
TCF4-269	ENST00000630224	IGIP	A6NJ69	53 aa		4.22	□□□□□ -1.73
TCF4-269	ENST00000630224		H0Y8G0	127 aa		4.22	□□□□□ -1.73
TCF4-269	ENST00000630224	SYS1-DBNDD2	H3BUS1	97 aa		4.22	□□□□□ -1.73
TCF4-269	ENST00000630224	SCGB1D1	O95968	90 aa		4.22	□□□□□ -1.73
TCF4-269	ENST00000630224	C3orf79	P0CE67	100 aa		4.22	□□□□□ -1.73
TCF4-269	ENST00000630224	CCL18	P55774	89 aa		4.22	□□□□□ -1.73
TCF4-269	ENST00000630224	TCTA	P57738	103 aa		4.22	□□□□□ -1.73
TCF4-269	ENST00000630224	GAGE6	Q13070	117 aa		4.22	□□□□□ -1.73
TCF4-269	ENST00000630224	LINC00173	Q6ZV60	143 aa		4.22	□□□□□ -1.73
TCF4-269	ENST00000630224	SPATA12	Q7Z6I5	190 aa		4.22	□□□□□ -1.73
TCF4-269	ENST00000630224	C2orf88	Q9BSF0	95 aa		4.22	□□□□□ -1.73
TCF4-269	ENST00000630224	VCX2	Q9H322	139 aa		4.22	□□□□□ -1.73
TCF4-269	ENST00000630224	UBE2D4	Q9Y2X8	147 aa		4.22	□□□□□ -1.73
TCF4-269	ENST00000630224	CSDC2	Q9Y534	153 aa	Known RBP	4.22	□□□□□ -1.73
TCF4-269	ENST00000630224	LRP1B	Q9NZR2	4599 aa		4.21	□□□□□ -1.74
TCF4-269	ENST00000630224	IGLV4-3	A0A075B6K6	122 aa		4.21	□□□□□ -1.74
TCF4-269	ENST00000630224	TRAV12-1	A0A0B4J245	112 aa		4.21	□□□□□ -1.74
TCF4-269	ENST00000630224	MRPS36	P82909	103 aa	Known RBP	4.21	□□□□□ -1.74
TCF4-269	ENST00000630224	PMVK	Q15126	192 aa		4.21	□□□□□ -1.74
TCF4-269	ENST00000630224	TEX43	Q6ZNM6	134 aa		4.21	□□□□□ -1.74
TCF4-269	ENST00000630224	SRRM2	Q9UQ35	2752 aa	Known RBP	4.21	□□□□□ -1.74
TCF4-269	ENST00000630224		A0A1B0GUV1	79 aa		4.2	□□□□□ -1.74
TCF4-269	ENST00000630224	C16orf90	A8MZG2	172 aa		4.2	□□□□□ -1.74
TCF4-269	ENST00000630224	SMIM6	P0DI80	62 aa		4.2	□□□□□ -1.74
TCF4-269	ENST00000630224	RBX1	P62877	108 aa		4.2	□□□□□ -1.74
TCF4-269	ENST00000630224	JOSD1	Q15040	202 aa	Predicted RBP	4.2	□□□□□ -1.74
TCF4-269	ENST00000630224	ESRG	Q1W209	222 aa		4.2	□□□□□ -1.74
TCF4-269	ENST00000630224	ZNF664	Q8N3J9	261 aa		4.2	□□□□□ -1.74
TCF4-269	ENST00000630224	BAALC	Q8WXS3	180 aa		4.2	□□□□□ -1.74
TCF4-269	ENST00000630224	CST9L	Q9H4G1	147 aa		4.2	□□□□□ -1.74
TCF4-269	ENST00000630224	MRPS16	Q9Y3D3	137 aa	Known RBP	4.2	□□□□□ -1.74
TCF4-269	ENST00000630224	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.2	□□□□□ -1.74
TCF4-269	ENST00000630224	DPM2	O94777	84 aa		4.19	□□□□□ -1.74
TCF4-269	ENST00000630224	PLN	P26678	52 aa		4.19	□□□□□ -1.74
TCF4-269	ENST00000630224	LINC01545	Q5VT33	79 aa		4.19	□□□□□ -1.74
TCF4-269	ENST00000630224		Q6ZUT4	128 aa		4.19	□□□□□ -1.74
TCF4-269	ENST00000630224	UBE2DNL	Q8IWF7	75 aa		4.19	□□□□□ -1.74
TCF4-269	ENST00000630224	OPRPN	Q99935	248 aa	Predicted RBP	4.19	□□□□□ -1.74
TCF4-269	ENST00000630224	CDC42SE2	Q9NRR3	84 aa		4.19	□□□□□ -1.74
TCF4-269	ENST00000630224	UBR4	Q5T4S7	5183 aa		4.19	□□□□□ -1.74
TCF4-269	ENST00000630224	DNAH5	Q8TE73	4624 aa		4.18	□□□□□ -1.74
TCF4-269	ENST00000630224	TRAV9-2	A0A087WT02	112 aa		4.18	□□□□□ -1.74
TCF4-269	ENST00000630224	HSBP1L1	C9JCN9	74 aa		4.18	□□□□□ -1.74
TCF4-269	ENST00000630224		F8VRH5	84 aa		4.18	□□□□□ -1.74
TCF4-269	ENST00000630224	SIVA1	O15304	175 aa		4.18	□□□□□ -1.74
TCF4-269	ENST00000630224	CCL25	O15444	150 aa		4.18	□□□□□ -1.74
TCF4-269	ENST00000630224	IGKC	P01834	107 aa		4.18	□□□□□ -1.74
TCF4-269	ENST00000630224	ANG	P03950	147 aa	Known RBP	4.18	□□□□□ -1.74
TCF4-269	ENST00000630224	SEC11A	P67812	179 aa		4.18	□□□□□ -1.74
TCF4-269	ENST00000630224	S100A12	P80511	92 aa		4.18	□□□□□ -1.74
TCF4-269	ENST00000630224	MPV17L2	Q567V2	206 aa		4.18	□□□□□ -1.74
TCF4-269	ENST00000630224	RNASE13	Q5GAN3	156 aa	Known RBP	4.18	□□□□□ -1.74
TCF4-269	ENST00000630224	WFDC10B	Q8IUB3	73 aa		4.18	□□□□□ -1.74
TCF4-269	ENST00000630224		Q8N976	141 aa		4.18	□□□□□ -1.74
TCF4-269	ENST00000630224	AMELX	Q99217	191 aa		4.18	□□□□□ -1.74
TCF4-269	ENST00000630224	GEMIN7	Q9H840	131 aa	Known RBP	4.18	□□□□□ -1.74
TCF4-269	ENST00000630224	MRPL35	Q9NZE8	188 aa	Known RBP	4.18	□□□□□ -1.74
TCF4-269	ENST00000630224	LINC00588	Q9Y4M8	146 aa		4.18	□□□□□ -1.74
TCF4-269	ENST00000630224	IGLV4-60	A0A075B6I1	120 aa		4.17	□□□□□ -1.74
TCF4-269	ENST00000630224	TRAV13-1	A0A0B4J241	112 aa		4.17	□□□□□ -1.74
TCF4-269	ENST00000630224	IGKV3OR2-268	A0A0C4DH90	116 aa		4.17	□□□□□ -1.74
TCF4-269	ENST00000630224	CDK2AP2	O75956	126 aa		4.17	□□□□□ -1.74
TCF4-269	ENST00000630224	IGHV3-30	P01768	117 aa		4.17	□□□□□ -1.74
TCF4-269	ENST00000630224	IGHV3-33	P01772	117 aa		4.17	□□□□□ -1.74
TCF4-269	ENST00000630224	CRP	P02741	224 aa		4.17	□□□□□ -1.74
TCF4-269	ENST00000630224	DNAH10OS	P0CZ25	163 aa		4.17	□□□□□ -1.74
TCF4-269	ENST00000630224	IGHV3-30-3	P0DP02	117 aa		4.17	□□□□□ -1.74
TCF4-269	ENST00000630224	IGHV3-30-5	P0DP03	117 aa		4.17	□□□□□ -1.74
TCF4-269	ENST00000630224	SS18	Q15532	418 aa		4.17	□□□□□ -1.74
TCF4-269	ENST00000630224	PYY3	Q5JQD4	70 aa		4.17	□□□□□ -1.74
TCF4-269	ENST00000630224	LINC01556	Q5JQF7	62 aa		4.17	□□□□□ -1.74
TCF4-269	ENST00000630224	ZC2HC1B	Q5TFG8	222 aa		4.17	□□□□□ -1.74
TCF4-269	ENST00000630224	LINC00269	Q8N2A0	174 aa		4.17	□□□□□ -1.74
TCF4-269	ENST00000630224	PMCHL2	Q9BQD1	86 aa		4.17	□□□□□ -1.74
TCF4-269	ENST00000630224	UPK3B	Q9BT76	320 aa		4.17	□□□□□ -1.74
TCF4-269	ENST00000630224	CHAC1	Q9BUX1	264 aa		4.17	□□□□□ -1.74
TCF4-269	ENST00000630224	VAMP8	Q9BV40	100 aa		4.17	□□□□□ -1.74
TCF4-269	ENST00000630224		A0A0J9YXV3	536 aa		4.16	□□□□□ -1.74
TCF4-269	ENST00000630224	TINCR	A0A1B0GVN0	87 aa		4.16	□□□□□ -1.74
TCF4-269	ENST00000630224		H3BRM9	83 aa		4.16	□□□□□ -1.74
TCF4-269	ENST00000630224		K7EP13	123 aa		4.16	□□□□□ -1.74
TCF4-269	ENST00000630224	IGLC3	P0DOY3	106 aa		4.16	□□□□□ -1.74
TCF4-269	ENST00000630224	UBE2D1	P51668	147 aa		4.16	□□□□□ -1.74
TCF4-269	ENST00000630224	HERVK_113	P61574	105 aa		4.16	□□□□□ -1.74
TCF4-269	ENST00000630224	HERVK_113	P63121	156 aa		4.16	□□□□□ -1.74
TCF4-269	ENST00000630224	REG3A	Q06141	175 aa		4.16	□□□□□ -1.74
TCF4-269	ENST00000630224	NFE4	Q86UQ8	179 aa		4.16	□□□□□ -1.74
TCF4-269	ENST00000630224	ATOH7	Q8N100	152 aa		4.16	□□□□□ -1.74
TCF4-269	ENST00000630224	C10orf126	Q8N4M7	172 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms