RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 A0A1B0GUV1 79 aa6.81□□□□□ -1.32
SOX2-OT-244ENST00000627738 ESRGQ1W209 222 aa6.81□□□□□ -1.32
SOX2-OT-244ENST00000627738 TMEM170BQ5T4T1 132 aa6.81□□□□□ -1.32
SOX2-OT-244ENST00000627738 C15orf53Q8NAA6 179 aa6.81□□□□□ -1.32
SOX2-OT-244ENST00000627738 SVIPQ8NHG7 77 aa6.81□□□□□ -1.32
SOX2-OT-244ENST00000627738 TRAV8-6A0A0B4J262 113 aa6.8□□□□□ -1.32
SOX2-OT-244ENST00000627738 IGKV3OR2-268A0A0C4DH90 116 aa6.8□□□□□ -1.32
SOX2-OT-244ENST00000627738 TINCRA0A1B0GVN0 87 aa6.8□□□□□ -1.32
SOX2-OT-244ENST00000627738 IGLL5B9A064 214 aa6.8□□□□□ -1.32
SOX2-OT-244ENST00000627738 ZNF22P17026 224 aaPredicted RBP6.8□□□□□ -1.32
SOX2-OT-244ENST00000627738 NMUP48645 174 aa6.8□□□□□ -1.32
SOX2-OT-244ENST00000627738 FAM30AQ9NZY2 134 aa6.8□□□□□ -1.32
SOX2-OT-244ENST00000627738 IGKV2D-26A0A0A0MRZ7 120 aa6.79□□□□□ -1.32
SOX2-OT-244ENST00000627738 LINC00242Q5T6M2 205 aa6.79□□□□□ -1.32
SOX2-OT-244ENST00000627738 FAM19A3Q7Z5A8 133 aa6.79□□□□□ -1.32
SOX2-OT-244ENST00000627738 WWC2-AS2Q96NR7 200 aa6.79□□□□□ -1.32
SOX2-OT-244ENST00000627738 MIEN1Q9BRT3 115 aa6.79□□□□□ -1.32
SOX2-OT-244ENST00000627738 GEMIN7Q9H840 131 aaKnown RBP6.79□□□□□ -1.32
SOX2-OT-244ENST00000627738 UQCR10Q9UDW1 63 aa6.79□□□□□ -1.32
SOX2-OT-244ENST00000627738 TMEM223A0PJW6 202 aa6.78□□□□□ -1.32
SOX2-OT-244ENST00000627738 COX8AP10176 69 aa6.78□□□□□ -1.32
SOX2-OT-244ENST00000627738 DDTP30046 118 aa6.78□□□□□ -1.32
SOX2-OT-244ENST00000627738 HERVK_113P61574 105 aa6.78□□□□□ -1.32
SOX2-OT-244ENST00000627738 COX6A2Q02221 97 aa6.78□□□□□ -1.32
SOX2-OT-244ENST00000627738 WFDC10BQ8IUB3 73 aa6.78□□□□□ -1.32
SOX2-OT-244ENST00000627738 PCP2Q8IVA1 136 aa6.78□□□□□ -1.32
SOX2-OT-244ENST00000627738 LINC00469Q8N7U9 141 aa6.78□□□□□ -1.32
SOX2-OT-244ENST00000627738 TP73-AS1Q9UF72 201 aa6.78□□□□□ -1.32
SOX2-OT-244ENST00000627738 PLECQ15149 4684 aaKnown RBP6.77□□□□□ -1.33
SOX2-OT-244ENST00000627738 E9PLD3 99 aa6.77□□□□□ -1.33
SOX2-OT-244ENST00000627738 ANGP03950 147 aaKnown RBP6.77□□□□□ -1.33
SOX2-OT-244ENST00000627738 HERVK_113P63121 156 aa6.77□□□□□ -1.33
SOX2-OT-244ENST00000627738 SEC11AP67812 179 aa6.77□□□□□ -1.33
SOX2-OT-244ENST00000627738 SLC25A34Q6PIV7 304 aa6.77□□□□□ -1.33
SOX2-OT-244ENST00000627738 CLPSL2Q6UWE3 100 aa6.77□□□□□ -1.33
SOX2-OT-244ENST00000627738 LINC00269Q8N2A0 174 aa6.77□□□□□ -1.33
SOX2-OT-244ENST00000627738 TTTY13Q9BZ97 58 aa6.77□□□□□ -1.33
SOX2-OT-244ENST00000627738 IGHV3-64A0A075B6Q5 118 aa6.76□□□□□ -1.33
SOX2-OT-244ENST00000627738 IGLV5-45A0A087WSX0 123 aa6.76□□□□□ -1.33
SOX2-OT-244ENST00000627738 LINC00959A0A1B0GUT2 108 aa6.76□□□□□ -1.33
SOX2-OT-244ENST00000627738 IGHV3-30P01768 117 aa6.76□□□□□ -1.33
SOX2-OT-244ENST00000627738 IGHV3-33P01772 117 aa6.76□□□□□ -1.33
SOX2-OT-244ENST00000627738 IGHV3-30-3P0DP02 117 aa6.76□□□□□ -1.33
SOX2-OT-244ENST00000627738 IGHV3-30-5P0DP03 117 aa6.76□□□□□ -1.33
SOX2-OT-244ENST00000627738 GCSHP23434 173 aa6.76□□□□□ -1.33
SOX2-OT-244ENST00000627738 PTTG1IPP53801 180 aa6.76□□□□□ -1.33
SOX2-OT-244ENST00000627738 BOD1L2Q8IYS8 172 aa6.76□□□□□ -1.33
SOX2-OT-244ENST00000627738 CDKN2A-AS1Q9UH64 79 aa6.76□□□□□ -1.33
SOX2-OT-244ENST00000627738 DNAH7Q8WXX0 4024 aa6.75□□□□□ -1.33
SOX2-OT-244ENST00000627738 LINC00587B1AMM8 73 aa6.75□□□□□ -1.33
SOX2-OT-244ENST00000627738 H3BRM9 83 aa6.75□□□□□ -1.33
SOX2-OT-244ENST00000627738 LEPROTO15243 131 aa6.75□□□□□ -1.33
SOX2-OT-244ENST00000627738 SPINK8P0C7L1 97 aa6.75□□□□□ -1.33
SOX2-OT-244ENST00000627738 HNRNPA3P51991 378 aaKnown RBP6.75□□□□□ -1.33
SOX2-OT-244ENST00000627738 REG3AQ06141 175 aa6.75□□□□□ -1.33
SOX2-OT-244ENST00000627738 SS18Q15532 418 aa6.75□□□□□ -1.33
SOX2-OT-244ENST00000627738 MAPKAPK5-AS1Q8N8E1 139 aa6.75□□□□□ -1.33
SOX2-OT-244ENST00000627738 LINC00588Q9Y4M8 146 aa6.75□□□□□ -1.33
SOX2-OT-244ENST00000627738 TRAV8-3A0A0A6YYJ7 113 aa6.74□□□□□ -1.33
SOX2-OT-244ENST00000627738 IGHV1-58A0A0C4DH39 117 aa6.74□□□□□ -1.33
SOX2-OT-244ENST00000627738 KRTAP23-1A1A580 65 aa6.74□□□□□ -1.33
SOX2-OT-244ENST00000627738 DLEU1O43261 78 aa6.74□□□□□ -1.33
SOX2-OT-244ENST00000627738 CCL18P55774 89 aa6.74□□□□□ -1.33
SOX2-OT-244ENST00000627738 TSPEAR-AS2P59090 65 aa6.74□□□□□ -1.33
SOX2-OT-244ENST00000627738 KLK12Q9UKR0 248 aa6.74□□□□□ -1.33
SOX2-OT-244ENST00000627738 COL7A1Q02388 2944 aa6.74□□□□□ -1.33
SOX2-OT-244ENST00000627738 STARD9Q9P2P6 4700 aa6.73□□□□□ -1.33
SOX2-OT-244ENST00000627738 J3QQQ9 107 aa6.73□□□□□ -1.33
SOX2-OT-244ENST00000627738 CCL25O15444 150 aa6.73□□□□□ -1.33
SOX2-OT-244ENST00000627738 XCL1P47992 114 aa6.73□□□□□ -1.33
SOX2-OT-244ENST00000627738 PLEKHB2Q96CS7 222 aa6.73□□□□□ -1.33
SOX2-OT-244ENST00000627738 APLNQ9ULZ1 77 aa6.73□□□□□ -1.33
SOX2-OT-244ENST00000627738 MRPS16Q9Y3D3 137 aaKnown RBP6.73□□□□□ -1.33
SOX2-OT-244ENST00000627738 IGLV10-54A0A075B6I4 117 aa6.72□□□□□ -1.33
SOX2-OT-244ENST00000627738 MYMXA0A1B0GTQ4 84 aa6.72□□□□□ -1.33
SOX2-OT-244ENST00000627738 NUPR2A6NF83 97 aa6.72□□□□□ -1.33
SOX2-OT-244ENST00000627738 LGALS3P17931 250 aaKnown RBP6.72□□□□□ -1.33
SOX2-OT-244ENST00000627738 CTAG1AP78358 180 aa6.72□□□□□ -1.33
SOX2-OT-244ENST00000627738 LINC01556Q5JQF7 62 aa6.72□□□□□ -1.33
SOX2-OT-244ENST00000627738 ENHOQ6UWT2 76 aa6.72□□□□□ -1.33
SOX2-OT-244ENST00000627738 C2orf91Q6ZV80 131 aa6.72□□□□□ -1.33
SOX2-OT-244ENST00000627738 CHCHD10Q8WYQ3 142 aaPredicted RBP6.72□□□□□ -1.33
SOX2-OT-244ENST00000627738 UBE2WQ96B02 151 aa6.72□□□□□ -1.33
SOX2-OT-244ENST00000627738 PRR34Q9NV39 138 aa6.72□□□□□ -1.33
SOX2-OT-244ENST00000627738 IGHV3OR16-9A0A0B4J2B5 98 aa6.71□□□□□ -1.34
SOX2-OT-244ENST00000627738 ZNF815PA8K554 130 aa6.71□□□□□ -1.34
SOX2-OT-244ENST00000627738 SMIM1B2RUZ4 78 aa6.71□□□□□ -1.34
SOX2-OT-244ENST00000627738 CRPP02741 224 aa6.71□□□□□ -1.34
SOX2-OT-244ENST00000627738 DNAH10OSP0CZ25 163 aa6.71□□□□□ -1.34
SOX2-OT-244ENST00000627738 C5orf38Q86SI9 138 aa6.71□□□□□ -1.34
SOX2-OT-244ENST00000627738 KLK5Q9Y337 293 aaPredicted RBP6.71□□□□□ -1.34
SOX2-OT-244ENST00000627738 DNAH1Q9P2D7 4330 aa6.71□□□□□ -1.34
SOX2-OT-244ENST00000627738 MEGF8Q7Z7M0 2845 aa6.71□□□□□ -1.34
SOX2-OT-244ENST00000627738 A0A087WZ39 114 aa6.7□□□□□ -1.34
SOX2-OT-244ENST00000627738 IGLV5-39A0A0G2JS06 123 aa6.7□□□□□ -1.34
SOX2-OT-244ENST00000627738 SIVA1O15304 175 aa6.7□□□□□ -1.34
SOX2-OT-244ENST00000627738 CD164L2Q6UWJ8 174 aa6.7□□□□□ -1.34
SOX2-OT-244ENST00000627738 UPK3BQ9BT76 320 aa6.7□□□□□ -1.34
SOX2-OT-244ENST00000627738 KRTAP17-1Q9BYP8 105 aa6.7□□□□□ -1.34
SOX2-OT-244ENST00000627738 GAGE12HA6NDE8 117 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms