RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 SCXQ7RTU7 201 aa12.82□□□□□ -0.36
FARP1-242ENST00000627049 FAM19A5Q7Z5A7 132 aaPredicted RBP12.82□□□□□ -0.36
FARP1-242ENST00000627049 CCKP06307 115 aa12.81□□□□□ -0.36
FARP1-242ENST00000627049 WFDC9Q8NEX5 89 aa12.81□□□□□ -0.36
FARP1-242ENST00000627049 SHISA2Q6UWI4 295 aa12.81□□□□□ -0.36
FARP1-242ENST00000627049 BPY2O14599 106 aa12.81□□□□□ -0.36
FARP1-242ENST00000627049 DEFB4AO15263 64 aa12.8□□□□□ -0.36
FARP1-242ENST00000627049 LOC100131303A0A0U1RQF7 123 aa12.79□□□□□ -0.36
FARP1-242ENST00000627049 A0A087WYN8 130 aa12.79□□□□□ -0.36
FARP1-242ENST00000627049 LINC00959A0A1B0GUT2 108 aa12.79□□□□□ -0.36
FARP1-242ENST00000627049 NDUFC2-KCTD14E9PQ53 114 aa12.79□□□□□ -0.36
FARP1-242ENST00000627049 UBE2BP63146 152 aa12.79□□□□□ -0.36
FARP1-242ENST00000627049 PPDPFQ9H3Y8 114 aa12.79□□□□□ -0.36
FARP1-242ENST00000627049 SNURFQ9Y675 71 aa12.79□□□□□ -0.36
FARP1-242ENST00000627049 LOC107984640A0A0U1RRK4 108 aa12.78□□□□□ -0.36
FARP1-242ENST00000627049 NDUFC1O43677 76 aa12.78□□□□□ -0.36
FARP1-242ENST00000627049 ZNF702PQ9H963 129 aa12.78□□□□□ -0.36
FARP1-242ENST00000627049 CSDC2Q9Y534 153 aaKnown RBP12.78□□□□□ -0.36
FARP1-242ENST00000627049 DEFB135Q30KP9 77 aa12.77□□□□□ -0.36
FARP1-242ENST00000627049 Q6ZQY7 126 aa12.77□□□□□ -0.36
FARP1-242ENST00000627049 MP68P56378 58 aa12.77□□□□□ -0.37
FARP1-242ENST00000627049 Q6ZSN1 163 aa12.77□□□□□ -0.37
FARP1-242ENST00000627049 HRCT1Q6UXD1 115 aa12.77□□□□□ -0.37
FARP1-242ENST00000627049 MPLKIPQ8TAP9 179 aa12.77□□□□□ -0.37
FARP1-242ENST00000627049 FAM19A4Q96LR4 140 aa12.77□□□□□ -0.37
FARP1-242ENST00000627049 CCDC168Q8NDH2 2452 aa12.76□□□□□ -0.37
FARP1-242ENST00000627049 C18orf65Q6ZTR6 163 aa12.76□□□□□ -0.37
FARP1-242ENST00000627049 PKIGQ9Y2B9 76 aa12.75□□□□□ -0.37
FARP1-242ENST00000627049 PRB2P02812 416 aaPredicted RBP12.75□□□□□ -0.37
FARP1-242ENST00000627049 WFDC11Q8NEX6 87 aa12.75□□□□□ -0.37
FARP1-242ENST00000627049 SONP18583 2426 aaKnown RBP12.75□□□□□ -0.37
FARP1-242ENST00000627049 CEP295Q9C0D2 2601 aa12.74□□□□□ -0.37
FARP1-242ENST00000627049 CD164L2Q6UWJ8 174 aa12.74□□□□□ -0.37
FARP1-242ENST00000627049 ATP5EP56381 51 aaPredicted RBP12.73□□□□□ -0.37
FARP1-242ENST00000627049 LINC00846Q9NV44 126 aa12.73□□□□□ -0.37
FARP1-242ENST00000627049 C5orf42Q9H799 3197 aa12.73□□□□□ -0.37
FARP1-242ENST00000627049 AVPP01185 164 aa12.73□□□□□ -0.37
FARP1-242ENST00000627049 Q8IZM0 81 aa12.73□□□□□ -0.37
FARP1-242ENST00000627049 FHL3Q13643 280 aa12.73□□□□□ -0.37
FARP1-242ENST00000627049 XAGE1AQ9HD64 81 aa12.73□□□□□ -0.37
FARP1-242ENST00000627049 HIVEP2P31629 2446 aa12.72□□□□□ -0.37
FARP1-242ENST00000627049 DNAJC9-AS1A6NH13 148 aa12.72□□□□□ -0.37
FARP1-242ENST00000627049 USP9XQ93008 2570 aaPredicted RBP12.72□□□□□ -0.37
FARP1-242ENST00000627049 CHD7Q9P2D1 2997 aa12.72□□□□□ -0.37
FARP1-242ENST00000627049 A0A1W2PPR1 153 aa12.72□□□□□ -0.37
FARP1-242ENST00000627049 BEAN1Q3B7T3 259 aa12.72□□□□□ -0.37
FARP1-242ENST00000627049 Q8N814 137 aa12.72□□□□□ -0.37
FARP1-242ENST00000627049 TRAV7A0A075B6U4 112 aa12.71□□□□□ -0.37
FARP1-242ENST00000627049 MYO18BQ8IUG5 2567 aa12.71□□□□□ -0.37
FARP1-242ENST00000627049 IGHV4-31P0DP07 118 aa12.71□□□□□ -0.38
FARP1-242ENST00000627049 NTM-AS1Q6ZSK4 140 aa12.71□□□□□ -0.38
FARP1-242ENST00000627049 A0A087WZ39 114 aa12.71□□□□□ -0.38
FARP1-242ENST00000627049 HIVEP3Q5T1R4 2406 aa12.7□□□□□ -0.38
FARP1-242ENST00000627049 IGLV5-39A0A0G2JS06 123 aa12.7□□□□□ -0.38
FARP1-242ENST00000627049 COX17Q14061 63 aa12.7□□□□□ -0.38
FARP1-242ENST00000627049 Q8N2B8 174 aa12.7□□□□□ -0.38
FARP1-242ENST00000627049 NCOR2Q9Y618 2525 aa12.69□□□□□ -0.38
FARP1-242ENST00000627049 SMIM26A0A096LP01 95 aa12.69□□□□□ -0.38
FARP1-242ENST00000627049 LINC00337Q8N6G1 96 aa12.69□□□□□ -0.38
FARP1-242ENST00000627049 A0A0U1RQV1 116 aa12.69□□□□□ -0.38
FARP1-242ENST00000627049 ODF3L2Q3SX64 289 aa12.69□□□□□ -0.38
FARP1-242ENST00000627049 LYRM9A8MSI8 78 aa12.68□□□□□ -0.38
FARP1-242ENST00000627049 USP9YO00507 2555 aaPredicted RBP12.68□□□□□ -0.38
FARP1-242ENST00000627049 SERP1Q9Y6X1 66 aa12.68□□□□□ -0.38
FARP1-242ENST00000627049 HTTP42858 3142 aa12.68□□□□□ -0.38
FARP1-242ENST00000627049 BBC3Q96PG8 261 aaPredicted RBP12.67□□□□□ -0.38
FARP1-242ENST00000627049 IGLV4-60A0A075B6I1 120 aa12.67□□□□□ -0.38
FARP1-242ENST00000627049 CRYGAP11844 174 aa12.67□□□□□ -0.38
FARP1-242ENST00000627049 PCSK5Q92824 1860 aa12.67□□□□□ -0.38
FARP1-242ENST00000627049 C1orf158Q8N1D5 194 aa12.66□□□□□ -0.38
FARP1-242ENST00000627049 WFDC10AQ9H1F0 79 aa12.65□□□□□ -0.38
FARP1-242ENST00000627049 TLN2Q9Y4G6 2542 aa12.65□□□□□ -0.38
FARP1-242ENST00000627049 FAM19A3Q7Z5A8 133 aa12.65□□□□□ -0.39
FARP1-242ENST00000627049 PRR3P79522 188 aaKnown RBP12.64□□□□□ -0.39
FARP1-242ENST00000627049 FAM19A1Q7Z5A9 133 aa12.64□□□□□ -0.39
FARP1-242ENST00000627049 ANKRD11Q6UB99 2663 aaPredicted RBP12.63□□□□□ -0.39
FARP1-242ENST00000627049 SETD2Q9BYW2 2564 aaPredicted RBP12.63□□□□□ -0.39
FARP1-242ENST00000627049 MIFP14174 115 aa12.63□□□□□ -0.39
FARP1-242ENST00000627049 PIEZO1Q92508 2521 aa12.62□□□□□ -0.39
FARP1-242ENST00000627049 NHLRC4P0CG21 123 aaPredicted RBP12.62□□□□□ -0.39
FARP1-242ENST00000627049 ABCA2Q9BZC7 2435 aa12.62□□□□□ -0.39
FARP1-242ENST00000627049 IGLV5-45A0A087WSX0 123 aa12.62□□□□□ -0.39
FARP1-242ENST00000627049 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.62□□□□□ -0.39
FARP1-242ENST00000627049 MUC7Q8TAX7 377 aa12.61□□□□□ -0.39
FARP1-242ENST00000627049 C3orf84H3BNL1 204 aa12.61□□□□□ -0.39
FARP1-242ENST00000627049 LITAFQ99732 161 aa12.61□□□□□ -0.39
FARP1-242ENST00000627049 SOSTDC1Q6X4U4 206 aa12.6□□□□□ -0.39
FARP1-242ENST00000627049 IL17DQ8TAD2 202 aa12.6□□□□□ -0.39
FARP1-242ENST00000627049 FAM218AQ96MZ4 157 aa12.6□□□□□ -0.39
FARP1-242ENST00000627049 HILS1P60008 231 aa12.6□□□□□ -0.39
FARP1-242ENST00000627049 ZNF73O43830 326 aaPredicted RBP12.59□□□□□ -0.39
FARP1-242ENST00000627049 RPS28P62857 69 aaKnown RBP12.59□□□□□ -0.39
FARP1-242ENST00000627049 KLK9Q2XQG4 91 aa12.59□□□□□ -0.39
FARP1-242ENST00000627049 FN1P02751 2386 aaKnown RBP12.58□□□□□ -0.4
FARP1-242ENST00000627049 C9orf116Q5BN46 136 aaPredicted RBP12.58□□□□□ -0.4
FARP1-242ENST00000627049 C11orf72Q8NBR9 251 aa12.57□□□□□ -0.4
FARP1-242ENST00000627049 Q9UF83 564 aa12.57□□□□□ -0.4
FARP1-242ENST00000627049 Q8N3U1 123 aa12.57□□□□□ -0.4
FARP1-242ENST00000627049 NDUFS5O43920 106 aa12.57□□□□□ -0.4
FARP1-242ENST00000627049 V9GYY9 64 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms