RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 ACYP1P07311 99 aa12.63□□□□□ -0.39
PCF11-207ENST00000624931 RBMY1A1P0DJD3 496 aaKnown RBP12.63□□□□□ -0.39
PCF11-207ENST00000624931 RBMY1CP0DJD4 496 aa12.63□□□□□ -0.39
PCF11-207ENST00000624931 HERVK_113P63121 156 aa12.63□□□□□ -0.39
PCF11-207ENST00000624931 RBMY1FQ15415 496 aaKnown RBP12.63□□□□□ -0.39
PCF11-207ENST00000624931 FAM19A3Q7Z5A8 133 aa12.63□□□□□ -0.39
PCF11-207ENST00000624931 C15orf53Q8NAA6 179 aa12.63□□□□□ -0.39
PCF11-207ENST00000624931 C19orf73Q9NVV2 129 aa12.63□□□□□ -0.39
PCF11-207ENST00000624931 RS1O15537 224 aa12.62□□□□□ -0.39
PCF11-207ENST00000624931 IGHV3-73A0A0B4J1V6 119 aa12.62□□□□□ -0.39
PCF11-207ENST00000624931 TRAV4A0A0B4J268 109 aa12.62□□□□□ -0.39
PCF11-207ENST00000624931 SHISA2Q6UWI4 295 aa12.62□□□□□ -0.39
PCF11-207ENST00000624931 GAGE12JA6NER3 117 aa12.61□□□□□ -0.39
PCF11-207ENST00000624931 GAGE7O76087 117 aa12.61□□□□□ -0.39
PCF11-207ENST00000624931 GAGE12FP0CL80 117 aa12.61□□□□□ -0.39
PCF11-207ENST00000624931 GAGE12GP0CL81 117 aa12.61□□□□□ -0.39
PCF11-207ENST00000624931 GAGE12IP0CL82 117 aa12.61□□□□□ -0.39
PCF11-207ENST00000624931 GAGE4Q13068 117 aa12.61□□□□□ -0.39
PCF11-207ENST00000624931 DGAT2L7PQ6IED9 249 aa12.61□□□□□ -0.39
PCF11-207ENST00000624931 CEMP1Q6PRD7 247 aaPredicted RBP12.61□□□□□ -0.39
PCF11-207ENST00000624931 NHLRC4P0CG21 123 aaPredicted RBP12.59□□□□□ -0.39
PCF11-207ENST00000624931 WFDC9Q8NEX5 89 aa12.59□□□□□ -0.39
PCF11-207ENST00000624931 COL6A5A8TX70 2615 aa12.59□□□□□ -0.39
PCF11-207ENST00000624931 IGLV5-39A0A0G2JS06 123 aa12.59□□□□□ -0.39
PCF11-207ENST00000624931 HTN1P15515 57 aa12.59□□□□□ -0.39
PCF11-207ENST00000624931 STHQ8IWL8 128 aa12.59□□□□□ -0.39
PCF11-207ENST00000624931 TMEM101Q96IK0 257 aa12.59□□□□□ -0.39
PCF11-207ENST00000624931 CSDC2Q9Y534 153 aaKnown RBP12.59□□□□□ -0.39
PCF11-207ENST00000624931 TRRAPQ9Y4A5 3859 aa12.59□□□□□ -0.39
PCF11-207ENST00000624931 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.58□□□□□ -0.4
PCF11-207ENST00000624931 IGKV2-29A2NJV5 120 aaPredicted RBP12.58□□□□□ -0.4
PCF11-207ENST00000624931 INSP01308 110 aa12.58□□□□□ -0.4
PCF11-207ENST00000624931 C11orf72Q8NBR9 251 aa12.58□□□□□ -0.4
PCF11-207ENST00000624931 RPL35AP18077 110 aaKnown RBP12.57□□□□□ -0.4
PCF11-207ENST00000624931 HERV-K104P63124 156 aa12.57□□□□□ -0.4
PCF11-207ENST00000624931 LINC01587Q99440 93 aa12.57□□□□□ -0.4
PCF11-207ENST00000624931 CDKN2A-AS1Q9UH64 79 aa12.57□□□□□ -0.4
PCF11-207ENST00000624931 RNASE13Q5GAN3 156 aaKnown RBP12.57□□□□□ -0.4
PCF11-207ENST00000624931 Q6ZSN1 163 aa12.57□□□□□ -0.4
PCF11-207ENST00000624931 LINC00308Q8TCZ7 52 aa12.57□□□□□ -0.4
PCF11-207ENST00000624931 IMUPQ9GZP8 106 aa12.57□□□□□ -0.4
PCF11-207ENST00000624931 COX7A2LO14548 114 aa12.56□□□□□ -0.4
PCF11-207ENST00000624931 CLEC2BQ92478 149 aa12.56□□□□□ -0.4
PCF11-207ENST00000624931 TRBV10-1A0A0K0K1A3 114 aa12.55□□□□□ -0.4
PCF11-207ENST00000624931 TRBV7-7A0A0K0K1E9 115 aa12.55□□□□□ -0.4
PCF11-207ENST00000624931 PRM2P04554 102 aa12.55□□□□□ -0.4
PCF11-207ENST00000624931 XCL2Q9UBD3 114 aa12.55□□□□□ -0.4
PCF11-207ENST00000624931 CMC4P56277 68 aaPredicted RBP12.54□□□□□ -0.4
PCF11-207ENST00000624931 OXLD1Q5BKU9 147 aa12.54□□□□□ -0.4
PCF11-207ENST00000624931 FAM110AQ9BQ89 295 aa12.54□□□□□ -0.4
PCF11-207ENST00000624931 MDFIQ99750 246 aa12.54□□□□□ -0.4
PCF11-207ENST00000624931 TRACP01848 142 aa12.53□□□□□ -0.4
PCF11-207ENST00000624931 DAZ2Q13117 558 aaKnown RBP12.53□□□□□ -0.4
PCF11-207ENST00000624931 DAZ4Q86SG3 579 aaKnown RBP12.53□□□□□ -0.4
PCF11-207ENST00000624931 Q9H8V8 135 aa12.53□□□□□ -0.4
PCF11-207ENST00000624931 DAZ3Q9NR90 486 aaKnown RBP12.53□□□□□ -0.4
PCF11-207ENST00000624931 A8MZ25 164 aa12.52□□□□□ -0.41
PCF11-207ENST00000624931 GIG44P09565 113 aaPredicted RBP12.52□□□□□ -0.41
PCF11-207ENST00000624931 NPC2P61916 151 aa12.52□□□□□ -0.41
PCF11-207ENST00000624931 IGHV3OR16-12A0A075B7B8 117 aa12.51□□□□□ -0.41
PCF11-207ENST00000624931 B5MCH6 92 aa12.51□□□□□ -0.41
PCF11-207ENST00000624931 RPL36AP83881 106 aaKnown RBP12.51□□□□□ -0.41
PCF11-207ENST00000624931 LINC00242Q5T6M2 205 aa12.51□□□□□ -0.41
PCF11-207ENST00000624931 RPL36ALQ969Q0 106 aaKnown RBP12.51□□□□□ -0.41
PCF11-207ENST00000624931 WIPF1O43516 503 aa12.51□□□□□ -0.41
PCF11-207ENST00000624931 IGHV3-38A0A0C4DH36 116 aa12.5□□□□□ -0.41
PCF11-207ENST00000624931 C1orf158Q8N1D5 194 aa12.49□□□□□ -0.41
PCF11-207ENST00000624931 OVOL2Q9BRP0 275 aa12.49□□□□□ -0.41
PCF11-207ENST00000624931 SMIM1B2RUZ4 78 aa12.48□□□□□ -0.41
PCF11-207ENST00000624931 KRTAP10-11P60412 298 aa12.48□□□□□ -0.41
PCF11-207ENST00000624931 COX6A2Q02221 97 aa12.48□□□□□ -0.41
PCF11-207ENST00000624931 FAM222AQ5U5X8 452 aa12.48□□□□□ -0.41
PCF11-207ENST00000624931 Q9UF83 564 aa12.48□□□□□ -0.41
PCF11-207ENST00000624931 SS18L2Q9UHA2 77 aa12.48□□□□□ -0.41
PCF11-207ENST00000624931 IL17DQ8TAD2 202 aa12.48□□□□□ -0.41
PCF11-207ENST00000624931 ZNF625Q96I27 306 aaPredicted RBP12.48□□□□□ -0.41
PCF11-207ENST00000624931 CMYA5Q8N3K9 4069 aa12.47□□□□□ -0.41
PCF11-207ENST00000624931 MEIG1Q5JSS6 88 aa12.47□□□□□ -0.41
PCF11-207ENST00000624931 TRAV13-2A0A0B4J235 113 aa12.46□□□□□ -0.41
PCF11-207ENST00000624931 LINC00643Q86TS7 51 aa12.46□□□□□ -0.41
PCF11-207ENST00000624931 K7EQD1 137 aa12.45□□□□□ -0.42
PCF11-207ENST00000624931 DAND5Q8N907 189 aa12.45□□□□□ -0.42
PCF11-207ENST00000624931 NACAE9PAV3 2078 aa12.45□□□□□ -0.42
PCF11-207ENST00000624931 CCDC179H3BU77 68 aa12.45□□□□□ -0.42
PCF11-207ENST00000624931 ATP5G1P05496 136 aa12.45□□□□□ -0.42
PCF11-207ENST00000624931 INAFM2P0DMQ5 153 aa12.45□□□□□ -0.42
PCF11-207ENST00000624931 CDC42SE2Q9NRR3 84 aa12.45□□□□□ -0.42
PCF11-207ENST00000624931 ANK2Q01484 3957 aa12.44□□□□□ -0.42
PCF11-207ENST00000624931 PKD1L1Q8TDX9 2849 aa12.44□□□□□ -0.42
PCF11-207ENST00000624931 F5H768 121 aa12.42□□□□□ -0.42
PCF11-207ENST00000624931 BAALC-AS2P0C853 105 aa12.42□□□□□ -0.42
PCF11-207ENST00000624931 CSNK1G2-AS1Q8NCQ2 148 aa12.42□□□□□ -0.42
PCF11-207ENST00000624931 RPL28P46779 137 aaKnown RBP12.42□□□□□ -0.42
PCF11-207ENST00000624931 SDIM1Q6ZPB5 146 aa12.42□□□□□ -0.42
PCF11-207ENST00000624931 TMEM126AQ9H061 195 aa12.42□□□□□ -0.42
PCF11-207ENST00000624931 TRGV1A0A0A0MS02 117 aa12.41□□□□□ -0.42
PCF11-207ENST00000624931 CXCL5P42830 114 aa12.41□□□□□ -0.42
PCF11-207ENST00000624931 SOSTDC1Q6X4U4 206 aa12.41□□□□□ -0.42
PCF11-207ENST00000624931 TRAV13-1A0A0B4J241 112 aa12.4□□□□□ -0.42
PCF11-207ENST00000624931 UBE2L6O14933 153 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms