RNA–Protein interactions for RNA: ENST00000622978.1

PCDHB12-202, Transcript of protocadherin beta 12, humanhuman

TSL 2 BASIC

Gene PCDHB12, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-202ENST00000622978 MTURNQ8N3F0 131 aa14.09□□□□□ -0.15
PCDHB12-202ENST00000622978 VSIG2Q96IQ7 327 aa14.09□□□□□ -0.15
PCDHB12-202ENST00000622978 IGLV5-45A0A087WSX0 123 aa14.08□□□□□ -0.15
PCDHB12-202ENST00000622978 TEX48A0A1B0GUV7 120 aa14.08□□□□□ -0.15
PCDHB12-202ENST00000622978 A4D1N5 150 aa14.08□□□□□ -0.15
PCDHB12-202ENST00000622978 A8MZ25 164 aa14.08□□□□□ -0.15
PCDHB12-202ENST00000622978 SPART-AS1P0CW21 52 aa14.08□□□□□ -0.15
PCDHB12-202ENST00000622978 HERVK_113P63121 156 aa14.08□□□□□ -0.15
PCDHB12-202ENST00000622978 MUSTN1Q8IVN3 82 aa14.08□□□□□ -0.15
PCDHB12-202ENST00000622978 GAGE6Q13070 117 aa14.08□□□□□ -0.16
PCDHB12-202ENST00000622978 FAM19A3Q7Z5A8 133 aa14.08□□□□□ -0.16
PCDHB12-202ENST00000622978 PRO1854Q9UHT4 67 aa14.08□□□□□ -0.16
PCDHB12-202ENST00000622978 LINC00242Q5T6M2 205 aa14.07□□□□□ -0.16
PCDHB12-202ENST00000622978 CHCHD5Q9BSY4 110 aa14.07□□□□□ -0.16
PCDHB12-202ENST00000622978 CDKN2A-AS1Q9UH64 79 aa14.07□□□□□ -0.16
PCDHB12-202ENST00000622978 PRO0461Q9UI25 63 aa14.07□□□□□ -0.16
PCDHB12-202ENST00000622978 NBEAL2Q6ZNJ1 2754 aa14.07□□□□□ -0.16
PCDHB12-202ENST00000622978 TRAV13-1A0A0B4J241 112 aa14.06□□□□□ -0.16
PCDHB12-202ENST00000622978 ATP5G1P05496 136 aa14.06□□□□□ -0.16
PCDHB12-202ENST00000622978 NDUFA12Q9UI09 145 aa14.06□□□□□ -0.16
PCDHB12-202ENST00000622978 PSMB2P49721 201 aa14.06□□□□□ -0.16
PCDHB12-202ENST00000622978 STAB1Q9NY15 2570 aa14.05□□□□□ -0.16
PCDHB12-202ENST00000622978 COX6A2Q02221 97 aa14.05□□□□□ -0.16
PCDHB12-202ENST00000622978 LYRM7Q5U5X0 104 aa14.05□□□□□ -0.16
PCDHB12-202ENST00000622978 LITAFQ99732 161 aa14.04□□□□□ -0.16
PCDHB12-202ENST00000622978 EIF4EBP3O60516 100 aaPredicted RBP14.03□□□□□ -0.16
PCDHB12-202ENST00000622978 SH2D6Q7Z4S9 175 aa14.03□□□□□ -0.16
PCDHB12-202ENST00000622978 ETDBQ3ZM63 59 aa14.03□□□□□ -0.16
PCDHB12-202ENST00000622978 C21orf62-AS1Q17RA5 79 aa14.02□□□□□ -0.16
PCDHB12-202ENST00000622978 A0A0B4J2C4 111 aa14.02□□□□□ -0.17
PCDHB12-202ENST00000622978 ZFAND6Q6FIF0 208 aa14.02□□□□□ -0.17
PCDHB12-202ENST00000622978 IGLV4-60A0A075B6I1 120 aa14.01□□□□□ -0.17
PCDHB12-202ENST00000622978 A0A096LPF7 62 aa14.01□□□□□ -0.17
PCDHB12-202ENST00000622978 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.01□□□□□ -0.17
PCDHB12-202ENST00000622978 F5H768 121 aa14.01□□□□□ -0.17
PCDHB12-202ENST00000622978 PRSS2P07478 247 aa14□□□□□ -0.17
PCDHB12-202ENST00000622978 ADAMTSL4-AS1Q5T5F5 129 aa14□□□□□ -0.17
PCDHB12-202ENST00000622978 RETNQ9HD89 108 aa14□□□□□ -0.17
PCDHB12-202ENST00000622978 MAST4O15021 2626 aa14□□□□□ -0.17
PCDHB12-202ENST00000622978 TRAV26-1A0A087WT03 109 aa14□□□□□ -0.17
PCDHB12-202ENST00000622978 IGHV3-33P01772 117 aa14□□□□□ -0.17
PCDHB12-202ENST00000622978 SPANXDQ9BXN6 97 aa14□□□□□ -0.17
PCDHB12-202ENST00000622978 SPANXCQ9NY87 97 aa14□□□□□ -0.17
PCDHB12-202ENST00000622978 TCL1BO95988 128 aa13.99□□□□□ -0.17
PCDHB12-202ENST00000622978 HTN3P15516 51 aa13.99□□□□□ -0.17
PCDHB12-202ENST00000622978 ERG28Q9UKR5 140 aa13.99□□□□□ -0.17
PCDHB12-202ENST00000622978 SCGB1C2P0DMR2 95 aa13.99□□□□□ -0.17
PCDHB12-202ENST00000622978 TRBV20-1A0A075B6N2 111 aa13.98□□□□□ -0.17
PCDHB12-202ENST00000622978 IGLV5-39A0A0G2JS06 123 aa13.98□□□□□ -0.17
PCDHB12-202ENST00000622978 H7C2G1 150 aa13.98□□□□□ -0.17
PCDHB12-202ENST00000622978 MIAQ16674 131 aa13.97□□□□□ -0.17
PCDHB12-202ENST00000622978 SMIM1B2RUZ4 78 aa13.97□□□□□ -0.17
PCDHB12-202ENST00000622978 SMCPP49901 116 aaPredicted RBP13.97□□□□□ -0.17
PCDHB12-202ENST00000622978 NDUFA1O15239 70 aa13.96□□□□□ -0.17
PCDHB12-202ENST00000622978 IGKV3OR2-268A0A0C4DH90 116 aa13.95□□□□□ -0.18
PCDHB12-202ENST00000622978 TMEM262E9PQX1 116 aa13.95□□□□□ -0.18
PCDHB12-202ENST00000622978 A0A1B0GUV1 79 aa13.95□□□□□ -0.18
PCDHB12-202ENST00000622978 J3QR89 54 aa13.95□□□□□ -0.18
PCDHB12-202ENST00000622978 NPC2P61916 151 aa13.95□□□□□ -0.18
PCDHB12-202ENST00000622978 MRPL23Q16540 153 aaKnown RBP13.94□□□□□ -0.18
PCDHB12-202ENST00000622978 Q1RN00 199 aa13.94□□□□□ -0.18
PCDHB12-202ENST00000622978 TIMM17BO60830 172 aa13.94□□□□□ -0.18
PCDHB12-202ENST00000622978 ICOSQ9Y6W8 199 aa13.94□□□□□ -0.18
PCDHB12-202ENST00000622978 C11orf68Q9H3H3 251 aaKnown RBP13.93□□□□□ -0.18
PCDHB12-202ENST00000622978 Q9H8V8 135 aa13.91□□□□□ -0.18
PCDHB12-202ENST00000622978 DAND5Q8N907 189 aa13.91□□□□□ -0.18
PCDHB12-202ENST00000622978 CMYA5Q8N3K9 4069 aa13.9□□□□□ -0.18
PCDHB12-202ENST00000622978 LINC00959A0A1B0GUT2 108 aa13.9□□□□□ -0.18
PCDHB12-202ENST00000622978 COL6A5A8TX70 2615 aa13.9□□□□□ -0.18
PCDHB12-202ENST00000622978 CIRBPQ14011 172 aaKnown RBP13.89□□□□□ -0.19
PCDHB12-202ENST00000622978 IFITM1P13164 125 aa13.89□□□□□ -0.19
PCDHB12-202ENST00000622978 PKD1L1Q8TDX9 2849 aa13.88□□□□□ -0.19
PCDHB12-202ENST00000622978 IGHV3OR16-9A0A0B4J2B5 98 aa13.88□□□□□ -0.19
PCDHB12-202ENST00000622978 ZNF625Q96I27 306 aaPredicted RBP13.88□□□□□ -0.19
PCDHB12-202ENST00000622978 FOXI1Q12951 378 aa13.87□□□□□ -0.19
PCDHB12-202ENST00000622978 TRBV30A0A0K0K1B3 111 aa13.86□□□□□ -0.19
PCDHB12-202ENST00000622978 SS18Q15532 418 aa13.86□□□□□ -0.19
PCDHB12-202ENST00000622978 LELP1Q5T871 98 aa13.86□□□□□ -0.19
PCDHB12-202ENST00000622978 TRIAP1O43715 76 aa13.86□□□□□ -0.19
PCDHB12-202ENST00000622978 A0A087WZ39 114 aa13.84□□□□□ -0.19
PCDHB12-202ENST00000622978 A0A0J9YWU9 116 aa13.84□□□□□ -0.19
PCDHB12-202ENST00000622978 CLPSL2Q6UWE3 100 aa13.84□□□□□ -0.19
PCDHB12-202ENST00000622978 Q6ZTC4 211 aa13.84□□□□□ -0.19
PCDHB12-202ENST00000622978 A0A0U1RRA0 63 aa13.84□□□□□ -0.19
PCDHB12-202ENST00000622978 GAGE12HA6NDE8 117 aa13.84□□□□□ -0.19
PCDHB12-202ENST00000622978 C9JAW5 83 aa13.84□□□□□ -0.19
PCDHB12-202ENST00000622978 TEN1Q86WV5 123 aa13.84□□□□□ -0.19
PCDHB12-202ENST00000622978 H3BNG1 76 aa13.83□□□□□ -0.2
PCDHB12-202ENST00000622978 HERV-K104P63124 156 aa13.83□□□□□ -0.2
PCDHB12-202ENST00000622978 ATXN8Q156A1 80 aa13.83□□□□□ -0.2
PCDHB12-202ENST00000622978 LINC00308Q8TCZ7 52 aa13.83□□□□□ -0.2
PCDHB12-202ENST00000622978 COX7B2Q8TF08 81 aa13.83□□□□□ -0.2
PCDHB12-202ENST00000622978 PRB2P02812 416 aaPredicted RBP13.83□□□□□ -0.2
PCDHB12-202ENST00000622978 SLC25A20O43772 301 aa13.82□□□□□ -0.2
PCDHB12-202ENST00000622978 ANGP03950 147 aaKnown RBP13.82□□□□□ -0.2
PCDHB12-202ENST00000622978 XCL1P47992 114 aa13.82□□□□□ -0.2
PCDHB12-202ENST00000622978 MEIG1Q5JSS6 88 aa13.82□□□□□ -0.2
PCDHB12-202ENST00000622978 C5orf38Q86SI9 138 aa13.82□□□□□ -0.2
PCDHB12-202ENST00000622978 LINC00269Q8N2A0 174 aa13.82□□□□□ -0.2
PCDHB12-202ENST00000622978 RPL13AP40429 203 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms