RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 CLPSL2Q6UWE3 100 aa14.74□□□□□ -0.05
SPAST-204ENST00000621856 HIST1H4GQ99525 98 aa14.74□□□□□ -0.05
SPAST-204ENST00000621856 ANGP03950 147 aaKnown RBP14.73□□□□□ -0.05
SPAST-204ENST00000621856 SS18Q15532 418 aa14.72□□□□□ -0.05
SPAST-204ENST00000621856 TAL2Q16559 108 aa14.72□□□□□ -0.05
SPAST-204ENST00000621856 Q8N3U1 123 aa14.72□□□□□ -0.05
SPAST-204ENST00000621856 A0A1B0GV90 55 aa14.72□□□□□ -0.05
SPAST-204ENST00000621856 SMIM1B2RUZ4 78 aa14.72□□□□□ -0.05
SPAST-204ENST00000621856 B9D2Q9BPU9 175 aa14.72□□□□□ -0.05
SPAST-204ENST00000621856 CEND1Q8N111 149 aa14.71□□□□□ -0.05
SPAST-204ENST00000621856 LINC00269Q8N2A0 174 aa14.71□□□□□ -0.05
SPAST-204ENST00000621856 NDUFA12Q9UI09 145 aa14.71□□□□□ -0.05
SPAST-204ENST00000621856 IGLV5-39A0A0G2JS06 123 aa14.7□□□□□ -0.06
SPAST-204ENST00000621856 ZFAND6Q6FIF0 208 aa14.69□□□□□ -0.06
SPAST-204ENST00000621856 HUWE1Q7Z6Z7 4374 aaKnown RBP14.68□□□□□ -0.06
SPAST-204ENST00000621856 CCL25O15444 150 aa14.68□□□□□ -0.06
SPAST-204ENST00000621856 PTTG1IPP53801 180 aa14.68□□□□□ -0.06
SPAST-204ENST00000621856 SRSF9Q13242 221 aaKnown RBP eCLIP14.68□□□□□ -0.06
SPAST-204ENST00000621856 IGHV3OR16-9A0A0B4J2B5 98 aa14.67□□□□□ -0.06
SPAST-204ENST00000621856 A6NDN8 102 aa14.67□□□□□ -0.06
SPAST-204ENST00000621856 XCL1P47992 114 aa14.67□□□□□ -0.06
SPAST-204ENST00000621856 REG3AQ06141 175 aa14.67□□□□□ -0.06
SPAST-204ENST00000621856 C10orf126Q8N4M7 172 aa14.67□□□□□ -0.06
SPAST-204ENST00000621856 FXYD2P54710 66 aa14.66□□□□□ -0.06
SPAST-204ENST00000621856 ESRGQ1W209 222 aa14.66□□□□□ -0.06
SPAST-204ENST00000621856 TM2D2Q9BX73 214 aa14.66□□□□□ -0.06
SPAST-204ENST00000621856 A0A0J9YXY3 114 aa14.66□□□□□ -0.06
SPAST-204ENST00000621856 IGHV3-30P01768 117 aa14.65□□□□□ -0.06
SPAST-204ENST00000621856 IGHV3-33P01772 117 aa14.65□□□□□ -0.06
SPAST-204ENST00000621856 IGHV3-30-5P0DP03 117 aa14.65□□□□□ -0.06
SPAST-204ENST00000621856 C5orf38Q86SI9 138 aa14.65□□□□□ -0.06
SPAST-204ENST00000621856 WFDC10BQ8IUB3 73 aa14.65□□□□□ -0.06
SPAST-204ENST00000621856 C15orf53Q8NAA6 179 aa14.65□□□□□ -0.06
SPAST-204ENST00000621856 SPANXB1Q9NS25 103 aaPredicted RBP14.65□□□□□ -0.06
SPAST-204ENST00000621856 A0A087WZ39 114 aa14.63□□□□□ -0.07
SPAST-204ENST00000621856 K7EP13 123 aa14.63□□□□□ -0.07
SPAST-204ENST00000621856 NDUFA1O15239 70 aa14.63□□□□□ -0.07
SPAST-204ENST00000621856 KLK12Q9UKR0 248 aa14.63□□□□□ -0.07
SPAST-204ENST00000621856 TMEM238C9JI98 176 aa14.62□□□□□ -0.07
SPAST-204ENST00000621856 IGLV10-54A0A075B6I4 117 aa14.61□□□□□ -0.07
SPAST-204ENST00000621856 CHCHD10Q8WYQ3 142 aaPredicted RBP14.61□□□□□ -0.07
SPAST-204ENST00000621856 Q9H8V8 135 aa14.61□□□□□ -0.07
SPAST-204ENST00000621856 TAX1BP3O14907 124 aa14.61□□□□□ -0.07
SPAST-204ENST00000621856 COX7B2Q8TF08 81 aa14.61□□□□□ -0.07
SPAST-204ENST00000621856 TOMM7Q9P0U1 55 aa14.61□□□□□ -0.07
SPAST-204ENST00000621856 CD164L2Q6UWJ8 174 aa14.6□□□□□ -0.07
SPAST-204ENST00000621856 Q6ZVH6 145 aa14.6□□□□□ -0.07
SPAST-204ENST00000621856 NHP2Q9NX24 153 aaKnown RBP14.6□□□□□ -0.07
SPAST-204ENST00000621856 IGLL5B9A064 214 aa14.59□□□□□ -0.07
SPAST-204ENST00000621856 CRPP02741 224 aa14.58□□□□□ -0.07
SPAST-204ENST00000621856 SMIM13P0DJ93 91 aa14.58□□□□□ -0.07
SPAST-204ENST00000621856 PRR34Q9NV39 138 aa14.58□□□□□ -0.07
SPAST-204ENST00000621856 KRTAP21-3Q3LHN1 58 aa14.58□□□□□ -0.08
SPAST-204ENST00000621856 TMEM238LA0A1B0GVL6 79 aa14.57□□□□□ -0.08
SPAST-204ENST00000621856 A6NJY4 79 aa14.57□□□□□ -0.08
SPAST-204ENST00000621856 COX7A2LO14548 114 aa14.57□□□□□ -0.08
SPAST-204ENST00000621856 NHLRC4P0CG21 123 aaPredicted RBP14.57□□□□□ -0.08
SPAST-204ENST00000621856 LINC01561Q8N1V8 128 aa14.57□□□□□ -0.08
SPAST-204ENST00000621856 COX11Q9Y6N1 276 aa14.57□□□□□ -0.08
SPAST-204ENST00000621856 ENHOQ6UWT2 76 aa14.56□□□□□ -0.08
SPAST-204ENST00000621856 UBE2WQ96B02 151 aa14.56□□□□□ -0.08
SPAST-204ENST00000621856 ZNF625Q96I27 306 aaPredicted RBP14.56□□□□□ -0.08
SPAST-204ENST00000621856 DNAH9Q9NYC9 4486 aa14.55□□□□□ -0.08
SPAST-204ENST00000621856 HERV-K104P63124 156 aa14.55□□□□□ -0.08
SPAST-204ENST00000621856 RAB37Q96AX2 223 aa14.55□□□□□ -0.08
SPAST-204ENST00000621856 LITAFQ99732 161 aa14.55□□□□□ -0.08
SPAST-204ENST00000621856 K7ERJ3 54 aa14.55□□□□□ -0.08
SPAST-204ENST00000621856 TIMM17BO60830 172 aa14.55□□□□□ -0.08
SPAST-204ENST00000621856 CIRBPQ14011 172 aaKnown RBP14.55□□□□□ -0.08
SPAST-204ENST00000621856 GAGE12HA6NDE8 117 aa14.54□□□□□ -0.08
SPAST-204ENST00000621856 MALP21145 153 aa14.53□□□□□ -0.08
SPAST-204ENST00000621856 SPANXDQ9BXN6 97 aa14.53□□□□□ -0.08
SPAST-204ENST00000621856 SPANXCQ9NY87 97 aa14.53□□□□□ -0.08
SPAST-204ENST00000621856 PRSS2P07478 247 aa14.52□□□□□ -0.08
SPAST-204ENST00000621856 FOXI1Q12951 378 aa14.52□□□□□ -0.08
SPAST-204ENST00000621856 LINC01556Q5JQF7 62 aa14.52□□□□□ -0.08
SPAST-204ENST00000621856 MEIG1Q5JSS6 88 aa14.52□□□□□ -0.08
SPAST-204ENST00000621856 ADAMTSL4-AS1Q5T5F5 129 aa14.52□□□□□ -0.08
SPAST-204ENST00000621856 CCL18P55774 89 aa14.52□□□□□ -0.09
SPAST-204ENST00000621856 MIAQ16674 131 aa14.52□□□□□ -0.09
SPAST-204ENST00000621856 MUSTN1Q8IVN3 82 aa14.52□□□□□ -0.09
SPAST-204ENST00000621856 TRAV8-4A0A0B4J246 113 aa14.51□□□□□ -0.09
SPAST-204ENST00000621856 C6orf226Q5I0X4 101 aa14.51□□□□□ -0.09
SPAST-204ENST00000621856 LINC00588Q9Y4M8 146 aa14.51□□□□□ -0.09
SPAST-204ENST00000621856 RPL24P83731 157 aaKnown RBP14.5□□□□□ -0.09
SPAST-204ENST00000621856 Q8IZM0 81 aa14.49□□□□□ -0.09
SPAST-204ENST00000621856 A0A0U1RRA0 63 aa14.49□□□□□ -0.09
SPAST-204ENST00000621856 A0A1B0GWB2 263 aa14.49□□□□□ -0.09
SPAST-204ENST00000621856 C9orf118A6NHY6 69 aa14.49□□□□□ -0.09
SPAST-204ENST00000621856 COL7A1Q02388 2944 aa14.47□□□□□ -0.09
SPAST-204ENST00000621856 APOMO95445 188 aa14.47□□□□□ -0.09
SPAST-204ENST00000621856 DNAH10OSP0CZ25 163 aa14.47□□□□□ -0.09
SPAST-204ENST00000621856 NPC2P61916 151 aa14.47□□□□□ -0.09
SPAST-204ENST00000621856 SFTA2Q6UW10 78 aa14.47□□□□□ -0.09
SPAST-204ENST00000621856 DAND5Q8N907 189 aa14.47□□□□□ -0.09
SPAST-204ENST00000621856 A4D1N5 150 aa14.46□□□□□ -0.09
SPAST-204ENST00000621856 CFAP161Q6P656 301 aa14.46□□□□□ -0.09
SPAST-204ENST00000621856 NAA38Q9BRA0 125 aaKnown RBP14.46□□□□□ -0.09
SPAST-204ENST00000621856 H3BUT2 72 aa14.46□□□□□ -0.1
SPAST-204ENST00000621856 VAMP3Q15836 100 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms