RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 SMCR5Q8TEV8 140 aa5.8□□□□□ -1.48
GDNF-208ENST00000620847 CDKN2A-AS1Q9UH64 79 aa5.8□□□□□ -1.48
GDNF-208ENST00000620847 COX7CP15954 63 aa5.8□□□□□ -1.48
GDNF-208ENST00000620847 DGAT2L7PQ6IED9 249 aa5.8□□□□□ -1.48
GDNF-208ENST00000620847 GAGE2AQ6NT46 116 aa5.8□□□□□ -1.48
GDNF-208ENST00000620847 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.8□□□□□ -1.48
GDNF-208ENST00000620847 LINC00308Q8TCZ7 52 aa5.8□□□□□ -1.48
GDNF-208ENST00000620847 CSDC2Q9Y534 153 aaKnown RBP5.8□□□□□ -1.48
GDNF-208ENST00000620847 MYO9AB2RTY4 2548 aa5.8□□□□□ -1.48
GDNF-208ENST00000620847 STHQ8IWL8 128 aa5.79□□□□□ -1.48
GDNF-208ENST00000620847 IGHV3OR16-12A0A075B7B8 117 aa5.79□□□□□ -1.48
GDNF-208ENST00000620847 A0A0U1RRA0 63 aa5.79□□□□□ -1.48
GDNF-208ENST00000620847 A0A1B0GX51 115 aa5.79□□□□□ -1.48
GDNF-208ENST00000620847 ATOX1O00244 68 aa5.79□□□□□ -1.48
GDNF-208ENST00000620847 COX6A2Q02221 97 aa5.79□□□□□ -1.48
GDNF-208ENST00000620847 C5orf47Q569G3 176 aa5.79□□□□□ -1.48
GDNF-208ENST00000620847 FAM19A3Q7Z5A8 133 aa5.79□□□□□ -1.48
GDNF-208ENST00000620847 Q9H8V8 135 aa5.79□□□□□ -1.48
GDNF-208ENST00000620847 ABCA12Q86UK0 2595 aa5.79□□□□□ -1.48
GDNF-208ENST00000620847 C5orf38Q86SI9 138 aa5.79□□□□□ -1.48
GDNF-208ENST00000620847 LOC107984640A0A0U1RRK4 108 aa5.78□□□□□ -1.48
GDNF-208ENST00000620847 ZNF843Q8N446 348 aa5.78□□□□□ -1.48
GDNF-208ENST00000620847 TRGV1A0A0A0MS02 117 aa5.78□□□□□ -1.48
GDNF-208ENST00000620847 IGLV5-39A0A0G2JS06 123 aa5.78□□□□□ -1.48
GDNF-208ENST00000620847 LINC00242Q5T6M2 205 aa5.78□□□□□ -1.48
GDNF-208ENST00000620847 FAM222AQ5U5X8 452 aa5.78□□□□□ -1.48
GDNF-208ENST00000620847 SDIM1Q6ZPB5 146 aa5.78□□□□□ -1.48
GDNF-208ENST00000620847 ZNF625Q96I27 306 aaPredicted RBP5.78□□□□□ -1.48
GDNF-208ENST00000620847 APCP25054 2843 aa5.78□□□□□ -1.48
GDNF-208ENST00000620847 DNAJC9-AS1A6NH13 148 aa5.78□□□□□ -1.48
GDNF-208ENST00000620847 KLK5Q9Y337 293 aaPredicted RBP5.78□□□□□ -1.48
GDNF-208ENST00000620847 TRBV10-1A0A0K0K1A3 114 aa5.77□□□□□ -1.49
GDNF-208ENST00000620847 K7EQD1 137 aa5.77□□□□□ -1.49
GDNF-208ENST00000620847 NTM-AS1Q6ZSK4 140 aa5.77□□□□□ -1.49
GDNF-208ENST00000620847 CUBNO60494 3623 aa5.77□□□□□ -1.49
GDNF-208ENST00000620847 CRYGAP11844 174 aa5.77□□□□□ -1.49
GDNF-208ENST00000620847 Q6ZTI0 123 aa5.77□□□□□ -1.49
GDNF-208ENST00000620847 OR13C6PQ8NH95 151 aa5.77□□□□□ -1.49
GDNF-208ENST00000620847 CCL24O00175 119 aa5.76□□□□□ -1.49
GDNF-208ENST00000620847 RPS28P62857 69 aaKnown RBP5.76□□□□□ -1.49
GDNF-208ENST00000620847 RPL36AP83881 106 aaKnown RBP5.76□□□□□ -1.49
GDNF-208ENST00000620847 RPL36ALQ969Q0 106 aaKnown RBP5.76□□□□□ -1.49
GDNF-208ENST00000620847 SMIM9A6NGZ8 99 aa5.76□□□□□ -1.49
GDNF-208ENST00000620847 FAM19A5Q7Z5A7 132 aaPredicted RBP5.76□□□□□ -1.49
GDNF-208ENST00000620847 PRIMA1Q86XR5 153 aa5.76□□□□□ -1.49
GDNF-208ENST00000620847 ITPR3Q14573 2671 aa5.76□□□□□ -1.49
GDNF-208ENST00000620847 A0A1W2PRX2 142 aa5.76□□□□□ -1.49
GDNF-208ENST00000620847 C11orf44Q8N8P7 122 aa5.76□□□□□ -1.49
GDNF-208ENST00000620847 NF1P21359 2839 aa5.75□□□□□ -1.49
GDNF-208ENST00000620847 NBPF19A0A087WUL8 3843 aa5.75□□□□□ -1.49
GDNF-208ENST00000620847 SMIM1B2RUZ4 78 aa5.75□□□□□ -1.49
GDNF-208ENST00000620847 DNAL4O96015 105 aa5.75□□□□□ -1.49
GDNF-208ENST00000620847 ESM1Q9NQ30 184 aa5.75□□□□□ -1.49
GDNF-208ENST00000620847 MALP21145 153 aa5.75□□□□□ -1.49
GDNF-208ENST00000620847 hADV29S1A0JD25 119 aa5.75□□□□□ -1.49
GDNF-208ENST00000620847 GIG44P09565 113 aaPredicted RBP5.75□□□□□ -1.49
GDNF-208ENST00000620847 HIST2H2BCQ6DN03 193 aa5.75□□□□□ -1.49
GDNF-208ENST00000620847 C2orf48Q96LS8 159 aa5.75□□□□□ -1.49
GDNF-208ENST00000620847 CDC42SE2Q9NRR3 84 aa5.75□□□□□ -1.49
GDNF-208ENST00000620847 OVOL2Q9BRP0 275 aa5.74□□□□□ -1.49
GDNF-208ENST00000620847 F5H768 121 aa5.74□□□□□ -1.49
GDNF-208ENST00000620847 RPL18AQ02543 176 aaKnown RBP5.74□□□□□ -1.49
GDNF-208ENST00000620847 SOSTDC1Q6X4U4 206 aa5.74□□□□□ -1.49
GDNF-208ENST00000620847 SETXQ7Z333 2677 aaKnown RBP5.74□□□□□ -1.49
GDNF-208ENST00000620847 TRAV13-2A0A0B4J235 113 aa5.74□□□□□ -1.49
GDNF-208ENST00000620847 TRAV13-1A0A0B4J241 112 aa5.74□□□□□ -1.49
GDNF-208ENST00000620847 PLAC8L1A1L4L8 177 aa5.74□□□□□ -1.49
GDNF-208ENST00000620847 PF4P02776 101 aa5.74□□□□□ -1.49
GDNF-208ENST00000620847 WFDC11Q8NEX6 87 aa5.74□□□□□ -1.49
GDNF-208ENST00000620847 NOP10Q9NPE3 64 aaKnown RBP5.74□□□□□ -1.49
GDNF-208ENST00000620847 WNK1Q9H4A3 2382 aa5.73□□□□□ -1.49
GDNF-208ENST00000620847 HIST1H4AP62805 103 aaKnown RBP5.73□□□□□ -1.49
GDNF-208ENST00000620847 Q9HAA7 133 aa5.73□□□□□ -1.49
GDNF-208ENST00000620847 TLN2Q9Y4G6 2542 aa5.73□□□□□ -1.49
GDNF-208ENST00000620847 CRPP02741 224 aa5.73□□□□□ -1.49
GDNF-208ENST00000620847 FAM218AQ96MZ4 157 aa5.73□□□□□ -1.49
GDNF-208ENST00000620847 NIPBLQ6KC79 2804 aaeCLIP5.73□□□□□ -1.49
GDNF-208ENST00000620847 CMC4P56277 68 aaPredicted RBP5.73□□□□□ -1.49
GDNF-208ENST00000620847 TMEM258P61165 79 aa5.72□□□□□ -1.49
GDNF-208ENST00000620847 C16orf74Q96GX8 76 aa5.72□□□□□ -1.49
GDNF-208ENST00000620847 C22orf24Q9Y442 160 aa5.72□□□□□ -1.49
GDNF-208ENST00000620847 MAST4O15021 2626 aa5.72□□□□□ -1.49
GDNF-208ENST00000620847 RPL28P46779 137 aaKnown RBP5.72□□□□□ -1.49
GDNF-208ENST00000620847 SERP2Q8N6R1 65 aa5.72□□□□□ -1.49
GDNF-208ENST00000620847 C19orf73Q9NVV2 129 aa5.72□□□□□ -1.49
GDNF-208ENST00000620847 MTORP42345 2549 aa5.72□□□□□ -1.49
GDNF-208ENST00000620847 TMEM243Q9BU79 118 aa5.72□□□□□ -1.49
GDNF-208ENST00000620847 IGKV3D-7A0A0C4DH55 119 aa5.71□□□□□ -1.5
GDNF-208ENST00000620847 Q6JHZ5 121 aa5.71□□□□□ -1.5
GDNF-208ENST00000620847 CSNK1G2-AS1Q8NCQ2 148 aa5.71□□□□□ -1.5
GDNF-208ENST00000620847 LINC01006Q8NI28 216 aa5.71□□□□□ -1.5
GDNF-208ENST00000620847 WFDC10AQ9H1F0 79 aa5.71□□□□□ -1.5
GDNF-208ENST00000620847 C16orf95Q9H693 158 aa5.71□□□□□ -1.5
GDNF-208ENST00000620847 SONP18583 2426 aaKnown RBP5.71□□□□□ -1.5
GDNF-208ENST00000620847 TRBV6-4A0A1B0GX49 114 aa5.71□□□□□ -1.5
GDNF-208ENST00000620847 UBE2L6O14933 153 aa5.71□□□□□ -1.5
GDNF-208ENST00000620847 PLA2G2AP14555 144 aa5.71□□□□□ -1.5
GDNF-208ENST00000620847 IGLV1-51P01701 117 aa5.7□□□□□ -1.5
GDNF-208ENST00000620847 GCN1Q92616 2671 aaKnown RBP5.7□□□□□ -1.5
GDNF-208ENST00000620847 FLNAP21333 2647 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms