RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 UBE2E2Q96LR5 201 aa6.21□□□□□ -1.41
C9orf72-206ENST00000619707 CSPG4Q6UVK1 2322 aa6.21□□□□□ -1.42
C9orf72-206ENST00000619707 A0A1B0GX51 115 aa6.21□□□□□ -1.42
C9orf72-206ENST00000619707 B4DSR2 109 aa6.2□□□□□ -1.42
C9orf72-206ENST00000619707 SLURP1P55000 103 aa6.2□□□□□ -1.42
C9orf72-206ENST00000619707 SND1-IT1Q9HBX3 110 aa6.2□□□□□ -1.42
C9orf72-206ENST00000619707 C14orf132Q9NPU4 83 aa6.2□□□□□ -1.42
C9orf72-206ENST00000619707 RPL18AQ02543 176 aaKnown RBP6.2□□□□□ -1.42
C9orf72-206ENST00000619707 MIR7-3HGQ8N6C7 128 aa6.2□□□□□ -1.42
C9orf72-206ENST00000619707 LINC00337Q8N6G1 96 aa6.2□□□□□ -1.42
C9orf72-206ENST00000619707 CDC42SE2Q9NRR3 84 aa6.2□□□□□ -1.42
C9orf72-206ENST00000619707 TRGV1A0A0A0MS02 117 aa6.2□□□□□ -1.42
C9orf72-206ENST00000619707 hADV29S1A0JD25 119 aa6.2□□□□□ -1.42
C9orf72-206ENST00000619707 DEFB136Q30KP8 78 aa6.2□□□□□ -1.42
C9orf72-206ENST00000619707 LINC00482Q8N8I6 264 aa6.2□□□□□ -1.42
C9orf72-206ENST00000619707 MAP6D1Q9H9H5 199 aa6.2□□□□□ -1.42
C9orf72-206ENST00000619707 A0A087WYN8 130 aa6.19□□□□□ -1.42
C9orf72-206ENST00000619707 IGKV3D-7A0A0C4DH55 119 aa6.19□□□□□ -1.42
C9orf72-206ENST00000619707 UBE2L6O14933 153 aa6.19□□□□□ -1.42
C9orf72-206ENST00000619707 COL12A1Q99715 3063 aa6.19□□□□□ -1.42
C9orf72-206ENST00000619707 K7EQD1 137 aa6.19□□□□□ -1.42
C9orf72-206ENST00000619707 NTM-AS1Q6ZSK4 140 aa6.19□□□□□ -1.42
C9orf72-206ENST00000619707 SMIM11BQ8TCY0 68 aa6.19□□□□□ -1.42
C9orf72-206ENST00000619707 BRK1Q8WUW1 75 aa6.19□□□□□ -1.42
C9orf72-206ENST00000619707 H0YGX0 51 aa6.19□□□□□ -1.42
C9orf72-206ENST00000619707 CCL24O00175 119 aa6.19□□□□□ -1.42
C9orf72-206ENST00000619707 Q6JHZ5 121 aa6.19□□□□□ -1.42
C9orf72-206ENST00000619707 COX7B2Q8TF08 81 aa6.19□□□□□ -1.42
C9orf72-206ENST00000619707 DYNLRB2Q8TF09 96 aa6.19□□□□□ -1.42
C9orf72-206ENST00000619707 TOMM7Q9P0U1 55 aa6.19□□□□□ -1.42
C9orf72-206ENST00000619707 XCL2Q9UBD3 114 aa6.19□□□□□ -1.42
C9orf72-206ENST00000619707 IGKV2-28A0A075B6P5 120 aa6.18□□□□□ -1.42
C9orf72-206ENST00000619707 TRBV10-1A0A0K0K1A3 114 aa6.18□□□□□ -1.42
C9orf72-206ENST00000619707 IGKV2D-28P01615 120 aa6.18□□□□□ -1.42
C9orf72-206ENST00000619707 LINC00158P58513 81 aa6.18□□□□□ -1.42
C9orf72-206ENST00000619707 Q5XG85 94 aa6.18□□□□□ -1.42
C9orf72-206ENST00000619707 PFN2P35080 140 aa6.17□□□□□ -1.42
C9orf72-206ENST00000619707 C9orf129Q5T035 196 aaKnown RBP6.17□□□□□ -1.42
C9orf72-206ENST00000619707 C18orf65Q6ZTR6 163 aa6.17□□□□□ -1.42
C9orf72-206ENST00000619707 TMEM243Q9BU79 118 aa6.17□□□□□ -1.42
C9orf72-206ENST00000619707 LINC00846Q9NV44 126 aa6.17□□□□□ -1.42
C9orf72-206ENST00000619707 LECT2O14960 151 aa6.17□□□□□ -1.42
C9orf72-206ENST00000619707 RPS28P62857 69 aaKnown RBP6.17□□□□□ -1.42
C9orf72-206ENST00000619707 SERP2Q8N6R1 65 aa6.17□□□□□ -1.42
C9orf72-206ENST00000619707 SPG11Q96JI7 2443 aa6.16□□□□□ -1.42
C9orf72-206ENST00000619707 ZNF702PQ9H963 129 aa6.16□□□□□ -1.42
C9orf72-206ENST00000619707 A0A087WVE0 104 aa6.15□□□□□ -1.42
C9orf72-206ENST00000619707 IGKV3OR2-268A0A0C4DH90 116 aa6.15□□□□□ -1.42
C9orf72-206ENST00000619707 TMEM258P61165 79 aa6.15□□□□□ -1.42
C9orf72-206ENST00000619707 Q6ZTI0 123 aa6.15□□□□□ -1.42
C9orf72-206ENST00000619707 OBSCN-AS1Q96MR7 158 aa6.15□□□□□ -1.42
C9orf72-206ENST00000619707 DSCR8Q96T75 97 aa6.15□□□□□ -1.42
C9orf72-206ENST00000619707 NCR3O14931 201 aa6.15□□□□□ -1.42
C9orf72-206ENST00000619707 GNLYP22749 145 aa6.15□□□□□ -1.42
C9orf72-206ENST00000619707 CCL18P55774 89 aa6.15□□□□□ -1.42
C9orf72-206ENST00000619707 CYSTM1Q9H1C7 97 aa6.15□□□□□ -1.42
C9orf72-206ENST00000619707 VPS13CQ709C8 3753 aa6.15□□□□□ -1.43
C9orf72-206ENST00000619707 PMAIP1Q13794 54 aa6.15□□□□□ -1.43
C9orf72-206ENST00000619707 MAP1AP78559 2803 aaPredicted RBP6.15□□□□□ -1.43
C9orf72-206ENST00000619707 USP17L23D6RBM5 183 aa6.14□□□□□ -1.43
C9orf72-206ENST00000619707 PAX4O43316 350 aa6.14□□□□□ -1.43
C9orf72-206ENST00000619707 C1orf158Q8N1D5 194 aa6.14□□□□□ -1.43
C9orf72-206ENST00000619707 CRYBG3Q68DQ2 2970 aa6.14□□□□□ -1.43
C9orf72-206ENST00000619707 IBA57-AS1B1ANH7 110 aa6.14□□□□□ -1.43
C9orf72-206ENST00000619707 SLPIP03973 132 aa6.14□□□□□ -1.43
C9orf72-206ENST00000619707 DEFB114Q30KQ6 69 aa6.14□□□□□ -1.43
C9orf72-206ENST00000619707 LINC01356Q8N9X3 169 aa6.14□□□□□ -1.43
C9orf72-206ENST00000619707 ORMDL1Q9P0S3 153 aa6.14□□□□□ -1.43
C9orf72-206ENST00000619707 CD164Q04900 197 aa6.12□□□□□ -1.43
C9orf72-206ENST00000619707 DPH3Q96FX2 82 aa6.12□□□□□ -1.43
C9orf72-206ENST00000619707 MRPL55Q7Z7F7 128 aaKnown RBP6.12□□□□□ -1.43
C9orf72-206ENST00000619707 UPK3BQ9BT76 320 aa6.12□□□□□ -1.43
C9orf72-206ENST00000619707 ODF3L2Q3SX64 289 aa6.12□□□□□ -1.43
C9orf72-206ENST00000619707 S100A7L2Q5SY68 101 aa6.12□□□□□ -1.43
C9orf72-206ENST00000619707 NOP10Q9NPE3 64 aaKnown RBP6.12□□□□□ -1.43
C9orf72-206ENST00000619707 C2CD3Q4AC94 2353 aa6.12□□□□□ -1.43
C9orf72-206ENST00000619707 CCKP06307 115 aa6.11□□□□□ -1.43
C9orf72-206ENST00000619707 DSCR9P59020 149 aa6.11□□□□□ -1.43
C9orf72-206ENST00000619707 Q6YL49 198 aa6.11□□□□□ -1.43
C9orf72-206ENST00000619707 C4orf3Q8WVX3 66 aa6.11□□□□□ -1.43
C9orf72-206ENST00000619707 TRGV2A0A075B6R0 118 aa6.11□□□□□ -1.43
C9orf72-206ENST00000619707 IGHV3OR16-9A0A0B4J2B5 98 aa6.1□□□□□ -1.43
C9orf72-206ENST00000619707 TRBV6-4A0A1B0GX49 114 aa6.1□□□□□ -1.43
C9orf72-206ENST00000619707 LOC100131303A0A0U1RQF7 123 aa6.1□□□□□ -1.43
C9orf72-206ENST00000619707 MAPK1IP1LQ8NDC0 245 aa6.1□□□□□ -1.43
C9orf72-206ENST00000619707 C11orf68Q9H3H3 251 aaKnown RBP6.1□□□□□ -1.43
C9orf72-206ENST00000619707 IGLV4-60A0A075B6I1 120 aa6.09□□□□□ -1.43
C9orf72-206ENST00000619707 A0A087WZ39 114 aa6.09□□□□□ -1.43
C9orf72-206ENST00000619707 JMJD7-PLA2G4BH0Y9G9 81 aa6.09□□□□□ -1.43
C9orf72-206ENST00000619707 LY6G6DO95868 133 aa6.09□□□□□ -1.43
C9orf72-206ENST00000619707 VPREB1P12018 145 aa6.09□□□□□ -1.43
C9orf72-206ENST00000619707 ATP5EP2Q5VTU8 51 aa6.09□□□□□ -1.43
C9orf72-206ENST00000619707 TRGV4A0A0C4DH28 118 aa6.09□□□□□ -1.44
C9orf72-206ENST00000619707 SS18Q15532 418 aa6.09□□□□□ -1.44
C9orf72-206ENST00000619707 GHRHP01286 108 aa6.08□□□□□ -1.44
C9orf72-206ENST00000619707 HILS1P60008 231 aa6.08□□□□□ -1.44
C9orf72-206ENST00000619707 TRAV23DV6A0A075B6W5 121 aa6.07□□□□□ -1.44
C9orf72-206ENST00000619707 TRBV6-8A0A0A6YYG3 113 aa6.07□□□□□ -1.44
C9orf72-206ENST00000619707 SERTAD4-AS1Q5TG53 156 aa6.07□□□□□ -1.44
C9orf72-206ENST00000619707 NOTCH3Q9UM47 2321 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms