RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 Q6ZVH6 145 aa7.76□□□□□ -1.17
POLR2A-209ENST00000617998 PIK3CD-AS1Q5SR53 167 aa7.75□□□□□ -1.17
POLR2A-209ENST00000617998 C10orf25Q5T742 122 aa7.75□□□□□ -1.17
POLR2A-209ENST00000617998 Q6ZRP5 223 aa7.75□□□□□ -1.17
POLR2A-209ENST00000617998 P0C879 139 aa7.75□□□□□ -1.17
POLR2A-209ENST00000617998 SEC61GP60059 68 aa7.75□□□□□ -1.17
POLR2A-209ENST00000617998 CASC10Q5T4H9 136 aa7.74□□□□□ -1.17
POLR2A-209ENST00000617998 EIF4EBP1Q13541 118 aaPredicted RBP7.74□□□□□ -1.17
POLR2A-209ENST00000617998 SPANXB1Q9NS25 103 aaPredicted RBP7.74□□□□□ -1.17
POLR2A-209ENST00000617998 IBA57-AS1B1ANH7 110 aa7.74□□□□□ -1.17
POLR2A-209ENST00000617998 TRAV23DV6A0A075B6W5 121 aa7.74□□□□□ -1.17
POLR2A-209ENST00000617998 CDKN2A-AS1Q9UH64 79 aa7.73□□□□□ -1.17
POLR2A-209ENST00000617998 C9orf116Q5BN46 136 aaPredicted RBP7.73□□□□□ -1.17
POLR2A-209ENST00000617998 H3BNG1 76 aa7.73□□□□□ -1.17
POLR2A-209ENST00000617998 F8WDY8 70 aa7.73□□□□□ -1.17
POLR2A-209ENST00000617998 LINC00588Q9Y4M8 146 aa7.73□□□□□ -1.17
POLR2A-209ENST00000617998 BAALC-AS2P0C853 105 aa7.72□□□□□ -1.17
POLR2A-209ENST00000617998 TYMSOSQ8TAI1 123 aa7.72□□□□□ -1.17
POLR2A-209ENST00000617998 UPK3BQ9BT76 320 aa7.72□□□□□ -1.17
POLR2A-209ENST00000617998 HIST1H2BKO60814 126 aa7.72□□□□□ -1.17
POLR2A-209ENST00000617998 HIST1H2BJP06899 126 aa7.72□□□□□ -1.17
POLR2A-209ENST00000617998 HIST1H2BOP23527 126 aa7.72□□□□□ -1.17
POLR2A-209ENST00000617998 HIST1H2BBP33778 126 aa7.72□□□□□ -1.17
POLR2A-209ENST00000617998 HIST1H2BDP58876 126 aa7.72□□□□□ -1.17
POLR2A-209ENST00000617998 HIST1H2BCP62807 126 aa7.72□□□□□ -1.17
POLR2A-209ENST00000617998 HIST2H2BEQ16778 126 aa7.72□□□□□ -1.17
POLR2A-209ENST00000617998 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.72□□□□□ -1.17
POLR2A-209ENST00000617998 HIST1H2BHQ93079 126 aa7.72□□□□□ -1.17
POLR2A-209ENST00000617998 HIST1H2BNQ99877 126 aa7.72□□□□□ -1.17
POLR2A-209ENST00000617998 HIST1H2BMQ99879 126 aa7.72□□□□□ -1.17
POLR2A-209ENST00000617998 SPANXDQ9BXN6 97 aa7.72□□□□□ -1.17
POLR2A-209ENST00000617998 CDIP1Q9H305 208 aa7.72□□□□□ -1.17
POLR2A-209ENST00000617998 A0A1B0GX51 115 aa7.72□□□□□ -1.17
POLR2A-209ENST00000617998 RNASE3P12724 160 aaKnown RBP7.72□□□□□ -1.17
POLR2A-209ENST00000617998 MP68P56378 58 aa7.72□□□□□ -1.17
POLR2A-209ENST00000617998 PRR9Q5T870 116 aa7.72□□□□□ -1.17
POLR2A-209ENST00000617998 LINC01620Q4KN68 170 aa7.72□□□□□ -1.17
POLR2A-209ENST00000617998 KRTAP1-3Q8IUG1 177 aa7.71□□□□□ -1.17
POLR2A-209ENST00000617998 TNRC6BQ9UPQ9 1833 aaKnown RBP7.71□□□□□ -1.18
POLR2A-209ENST00000617998 H3BMG7 143 aa7.71□□□□□ -1.18
POLR2A-209ENST00000617998 CRYGAP11844 174 aa7.7□□□□□ -1.18
POLR2A-209ENST00000617998 MUSTN1Q8IVN3 82 aa7.7□□□□□ -1.18
POLR2A-209ENST00000617998 C11orf86A6NJI1 115 aa7.7□□□□□ -1.18
POLR2A-209ENST00000617998 LINC01545Q5VT33 79 aa7.7□□□□□ -1.18
POLR2A-209ENST00000617998 DSCAML1Q8TD84 2053 aa7.7□□□□□ -1.18
POLR2A-209ENST00000617998 SPANXCQ9NY87 97 aa7.7□□□□□ -1.18
POLR2A-209ENST00000617998 CENPFP49454 3210 aa7.7□□□□□ -1.18
POLR2A-209ENST00000617998 UNQ6190/PRO20217Q6UXQ8 127 aa7.7□□□□□ -1.18
POLR2A-209ENST00000617998 C14orf132Q9NPU4 83 aa7.7□□□□□ -1.18
POLR2A-209ENST00000617998 TM2D3Q9BRN9 247 aa7.69□□□□□ -1.18
POLR2A-209ENST00000617998 MAPKAPK5-AS1Q8N8E1 139 aa7.69□□□□□ -1.18
POLR2A-209ENST00000617998 LINC00476Q8WZB0 136 aa7.69□□□□□ -1.18
POLR2A-209ENST00000617998 HIST1H2BLQ99880 126 aa7.69□□□□□ -1.18
POLR2A-209ENST00000617998 MRPL55Q7Z7F7 128 aaKnown RBP7.69□□□□□ -1.18
POLR2A-209ENST00000617998 IGLV4-3A0A075B6K6 122 aa7.68□□□□□ -1.18
POLR2A-209ENST00000617998 KRTAP10-3P60369 221 aa7.68□□□□□ -1.18
POLR2A-209ENST00000617998 A0A096LNT2 108 aa7.68□□□□□ -1.18
POLR2A-209ENST00000617998 LST1O00453 97 aa7.68□□□□□ -1.18
POLR2A-209ENST00000617998 SLPIP03973 132 aa7.68□□□□□ -1.18
POLR2A-209ENST00000617998 SPACA4Q8TDM5 124 aa7.68□□□□□ -1.18
POLR2A-209ENST00000617998 X6R8D5 127 aa7.68□□□□□ -1.18
POLR2A-209ENST00000617998 IGLC6P0CF74 106 aa7.67□□□□□ -1.18
POLR2A-209ENST00000617998 Q8NAQ8 132 aa7.67□□□□□ -1.18
POLR2A-209ENST00000617998 TMEM256-PLSCR3K7ERE1 68 aa7.67□□□□□ -1.18
POLR2A-209ENST00000617998 KRTAP1-1Q07627 177 aa7.67□□□□□ -1.18
POLR2A-209ENST00000617998 C19orf73Q9NVV2 129 aa7.67□□□□□ -1.18
POLR2A-209ENST00000617998 USP24Q9UPU5 2620 aa7.67□□□□□ -1.18
POLR2A-209ENST00000617998 CFC1BP0CG36 223 aa7.67□□□□□ -1.18
POLR2A-209ENST00000617998 CFC1P0CG37 223 aa7.67□□□□□ -1.18
POLR2A-209ENST00000617998 Q8IZM0 81 aa7.67□□□□□ -1.18
POLR2A-209ENST00000617998 CRIP3Q6Q6R5 217 aa7.67□□□□□ -1.18
POLR2A-209ENST00000617998 DLEU1O43261 78 aa7.66□□□□□ -1.18
POLR2A-209ENST00000617998 MRPL52Q86TS9 123 aaKnown RBP7.66□□□□□ -1.18
POLR2A-209ENST00000617998 COX17Q14061 63 aa7.66□□□□□ -1.18
POLR2A-209ENST00000617998 CDPF1Q6NVV7 123 aa7.66□□□□□ -1.18
POLR2A-209ENST00000617998 CDC42SE2Q9NRR3 84 aa7.66□□□□□ -1.18
POLR2A-209ENST00000617998 NDUFC2-KCTD14E9PQ53 114 aa7.65□□□□□ -1.18
POLR2A-209ENST00000617998 SRCAPQ6ZRS2 3230 aa7.65□□□□□ -1.19
POLR2A-209ENST00000617998 HIST3H2BBQ8N257 126 aa7.65□□□□□ -1.19
POLR2A-209ENST00000617998 ATRQ13535 2644 aa7.65□□□□□ -1.19
POLR2A-209ENST00000617998 TRBV6-5A0A0K0K1A5 114 aa7.64□□□□□ -1.19
POLR2A-209ENST00000617998 IGLV4-60A0A075B6I1 120 aa7.64□□□□□ -1.19
POLR2A-209ENST00000617998 JMJD7-PLA2G4BH0Y9G9 81 aa7.64□□□□□ -1.19
POLR2A-209ENST00000617998 RNF185Q96GF1 192 aa7.63□□□□□ -1.19
POLR2A-209ENST00000617998 TSHBP01222 138 aa7.63□□□□□ -1.19
POLR2A-209ENST00000617998 C6orf99Q4VX62 202 aa7.63□□□□□ -1.19
POLR2A-209ENST00000617998 TRBV27A0A0K0K1C4 114 aa7.63□□□□□ -1.19
POLR2A-209ENST00000617998 PDE6GP18545 87 aa7.63□□□□□ -1.19
POLR2A-209ENST00000617998 MRPS36P82909 103 aaKnown RBP7.63□□□□□ -1.19
POLR2A-209ENST00000617998 KIF25-AS1Q9Y6Z4 181 aa7.63□□□□□ -1.19
POLR2A-209ENST00000617998 PYGO1Q9Y3Y4 419 aa7.62□□□□□ -1.19
POLR2A-209ENST00000617998 CEND1Q8N111 149 aa7.62□□□□□ -1.19
POLR2A-209ENST00000617998 CFAP46Q8IYW2 2715 aa7.61□□□□□ -1.19
POLR2A-209ENST00000617998 A0A1B0GUV1 79 aa7.61□□□□□ -1.19
POLR2A-209ENST00000617998 ZNF73O43830 326 aaPredicted RBP7.61□□□□□ -1.19
POLR2A-209ENST00000617998 Q6ZRU5 148 aa7.61□□□□□ -1.19
POLR2A-209ENST00000617998 IGLC3P0DOY3 106 aa7.6□□□□□ -1.19
POLR2A-209ENST00000617998 BPY2O14599 106 aa7.6□□□□□ -1.19
POLR2A-209ENST00000617998 ADCYAP1P18509 176 aa7.6□□□□□ -1.19
POLR2A-209ENST00000617998 PYY3Q5JQD4 70 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms