RNA–Protein interactions for RNA: ENST00000617875.4

RECQL4-209, Transcript of RecQ like helicase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RECQL4, Length 3,809 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-209ENST00000617875 RBMY1BA6NDE4 496 aaKnown RBP11.64□□□□□ -0.55
RECQL4-209ENST00000617875 RBMY1EA6NEQ0 496 aaKnown RBP11.64□□□□□ -0.55
RECQL4-209ENST00000617875 RBMY1DP0C7P1 496 aaKnown RBP11.64□□□□□ -0.55
RECQL4-209ENST00000617875 SND1-IT1Q9HBX3 110 aa11.64□□□□□ -0.55
RECQL4-209ENST00000617875 Q6YL49 198 aa11.64□□□□□ -0.55
RECQL4-209ENST00000617875 LINC00526Q96FQ7 95 aa11.64□□□□□ -0.55
RECQL4-209ENST00000617875 DNAJC9-AS1A6NH13 148 aa11.63□□□□□ -0.55
RECQL4-209ENST00000617875 K7EQD1 137 aa11.63□□□□□ -0.55
RECQL4-209ENST00000617875 COX6A2Q02221 97 aa11.63□□□□□ -0.55
RECQL4-209ENST00000617875 GYPEP15421 78 aa11.63□□□□□ -0.55
RECQL4-209ENST00000617875 C14orf132Q9NPU4 83 aa11.63□□□□□ -0.55
RECQL4-209ENST00000617875 S100A7L2Q5SY68 101 aa11.62□□□□□ -0.55
RECQL4-209ENST00000617875 SMR3AQ99954 134 aa11.62□□□□□ -0.55
RECQL4-209ENST00000617875 MAST4O15021 2626 aa11.62□□□□□ -0.55
RECQL4-209ENST00000617875 LINC00482Q8N8I6 264 aa11.62□□□□□ -0.55
RECQL4-209ENST00000617875 NBEAL1Q6ZS30 2694 aa11.62□□□□□ -0.55
RECQL4-209ENST00000617875 LECT2O14960 151 aa11.62□□□□□ -0.55
RECQL4-209ENST00000617875 LINC00308Q8TCZ7 52 aa11.61□□□□□ -0.55
RECQL4-209ENST00000617875 H3BT86 120 aa11.61□□□□□ -0.55
RECQL4-209ENST00000617875 TMEM86BQ8N661 226 aa11.61□□□□□ -0.55
RECQL4-209ENST00000617875 DEFB135Q30KP9 77 aa11.6□□□□□ -0.55
RECQL4-209ENST00000617875 SDIM1Q6ZPB5 146 aa11.6□□□□□ -0.55
RECQL4-209ENST00000617875 BBC3Q96PG8 261 aaPredicted RBP11.6□□□□□ -0.55
RECQL4-209ENST00000617875 TRBV6-5A0A0K0K1A5 114 aa11.6□□□□□ -0.55
RECQL4-209ENST00000617875 TRBV30A0A0K0K1B3 111 aa11.59□□□□□ -0.55
RECQL4-209ENST00000617875 LINC01546A6NGU7 62 aa11.59□□□□□ -0.55
RECQL4-209ENST00000617875 LAMTOR3Q9UHA4 124 aa11.59□□□□□ -0.55
RECQL4-209ENST00000617875 UBE2D4Q9Y2X8 147 aa11.59□□□□□ -0.55
RECQL4-209ENST00000617875 ITPR2Q14571 2701 aa11.59□□□□□ -0.55
RECQL4-209ENST00000617875 ODF3L2Q3SX64 289 aa11.59□□□□□ -0.55
RECQL4-209ENST00000617875 SETXQ7Z333 2677 aaKnown RBP11.58□□□□□ -0.56
RECQL4-209ENST00000617875 EIF4EBP3O60516 100 aaPredicted RBP11.57□□□□□ -0.56
RECQL4-209ENST00000617875 INAFM2P0DMQ5 153 aa11.57□□□□□ -0.56
RECQL4-209ENST00000617875 UNC79Q9P2D8 2635 aa11.57□□□□□ -0.56
RECQL4-209ENST00000617875 SS18Q15532 418 aa11.56□□□□□ -0.56
RECQL4-209ENST00000617875 NOTCH1P46531 2555 aa11.56□□□□□ -0.56
RECQL4-209ENST00000617875 TMEM89A2RUT3 159 aa11.56□□□□□ -0.56
RECQL4-209ENST00000617875 C4orf3Q8WVX3 66 aa11.55□□□□□ -0.56
RECQL4-209ENST00000617875 A0A1B0GX51 115 aa11.55□□□□□ -0.56
RECQL4-209ENST00000617875 LST1O00453 97 aa11.55□□□□□ -0.56
RECQL4-209ENST00000617875 HAMPP81172 84 aa11.55□□□□□ -0.56
RECQL4-209ENST00000617875 COX7B2Q8TF08 81 aa11.54□□□□□ -0.56
RECQL4-209ENST00000617875 MXRA5Q9NR99 2828 aa11.54□□□□□ -0.56
RECQL4-209ENST00000617875 DAD1P61803 113 aa11.54□□□□□ -0.56
RECQL4-209ENST00000617875 MRPS36P82909 103 aaKnown RBP11.54□□□□□ -0.56
RECQL4-209ENST00000617875 COX7A2LO14548 114 aa11.53□□□□□ -0.56
RECQL4-209ENST00000617875 KLK5Q9Y337 293 aaPredicted RBP11.53□□□□□ -0.56
RECQL4-209ENST00000617875 TRAV13-2A0A0B4J235 113 aa11.53□□□□□ -0.56
RECQL4-209ENST00000617875 CITED1Q99966 193 aa11.53□□□□□ -0.56
RECQL4-209ENST00000617875 CHCHD7Q9BUK0 85 aa11.53□□□□□ -0.56
RECQL4-209ENST00000617875 NCR3O14931 201 aa11.53□□□□□ -0.56
RECQL4-209ENST00000617875 LINC00242Q5T6M2 205 aa11.53□□□□□ -0.56
RECQL4-209ENST00000617875 RPL32P62910 135 aaKnown RBP11.52□□□□□ -0.57
RECQL4-209ENST00000617875 PRR3P79522 188 aaKnown RBP11.52□□□□□ -0.57
RECQL4-209ENST00000617875 Q8N2B8 174 aa11.52□□□□□ -0.57
RECQL4-209ENST00000617875 C1orf158Q8N1D5 194 aa11.52□□□□□ -0.57
RECQL4-209ENST00000617875 ODF3Q96PU9 254 aa11.51□□□□□ -0.57
RECQL4-209ENST00000617875 DNAJC30Q96LL9 226 aa11.5□□□□□ -0.57
RECQL4-209ENST00000617875 hADV29S1A0JD25 119 aa11.49□□□□□ -0.57
RECQL4-209ENST00000617875 ZNF843Q8N446 348 aa11.49□□□□□ -0.57
RECQL4-209ENST00000617875 FAM19A4Q96LR4 140 aa11.49□□□□□ -0.57
RECQL4-209ENST00000617875 IGLV4-60A0A075B6I1 120 aa11.49□□□□□ -0.57
RECQL4-209ENST00000617875 TIRAPP58753 221 aa11.49□□□□□ -0.57
RECQL4-209ENST00000617875 TMEM126AQ9H061 195 aa11.49□□□□□ -0.57
RECQL4-209ENST00000617875 A0A087WVE0 104 aa11.48□□□□□ -0.57
RECQL4-209ENST00000617875 LINC00269Q8N2A0 174 aa11.48□□□□□ -0.57
RECQL4-209ENST00000617875 WFDC9Q8NEX5 89 aa11.48□□□□□ -0.57
RECQL4-209ENST00000617875 LINC01006Q8NI28 216 aa11.48□□□□□ -0.57
RECQL4-209ENST00000617875 PYGO1Q9Y3Y4 419 aa11.48□□□□□ -0.57
RECQL4-209ENST00000617875 NDUFA1O15239 70 aa11.48□□□□□ -0.57
RECQL4-209ENST00000617875 AMELXQ99217 191 aa11.47□□□□□ -0.57
RECQL4-209ENST00000617875 NIPBLQ6KC79 2804 aaeCLIP11.47□□□□□ -0.57
RECQL4-209ENST00000617875 KLK12Q9UKR0 248 aa11.47□□□□□ -0.57
RECQL4-209ENST00000617875 LINC00643Q86TS7 51 aa11.46□□□□□ -0.57
RECQL4-209ENST00000617875 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.46□□□□□ -0.57
RECQL4-209ENST00000617875 C16orf74Q96GX8 76 aa11.46□□□□□ -0.57
RECQL4-209ENST00000617875 TRAV23DV6A0A075B6W5 121 aa11.46□□□□□ -0.58
RECQL4-209ENST00000617875 FAM222AQ5U5X8 452 aa11.46□□□□□ -0.58
RECQL4-209ENST00000617875 SPANXDQ9BXN6 97 aa11.45□□□□□ -0.58
RECQL4-209ENST00000617875 SPANXCQ9NY87 97 aa11.45□□□□□ -0.58
RECQL4-209ENST00000617875 C9orf116Q5BN46 136 aaPredicted RBP11.45□□□□□ -0.58
RECQL4-209ENST00000617875 CSMD2Q7Z408 3487 aa11.45□□□□□ -0.58
RECQL4-209ENST00000617875 TRACP01848 142 aa11.44□□□□□ -0.58
RECQL4-209ENST00000617875 SMIM1B2RUZ4 78 aa11.44□□□□□ -0.58
RECQL4-209ENST00000617875 ACYP1P07311 99 aa11.43□□□□□ -0.58
RECQL4-209ENST00000617875 SHISA2Q6UWI4 295 aa11.43□□□□□ -0.58
RECQL4-209ENST00000617875 XAGE1AQ9HD64 81 aa11.42□□□□□ -0.58
RECQL4-209ENST00000617875 ORMDL1Q9P0S3 153 aa11.42□□□□□ -0.58
RECQL4-209ENST00000617875 NTM-AS1Q6ZSK4 140 aa11.42□□□□□ -0.58
RECQL4-209ENST00000617875 CDC42SE2Q9NRR3 84 aa11.42□□□□□ -0.58
RECQL4-209ENST00000617875 SMIM11BQ8TCY0 68 aa11.42□□□□□ -0.58
RECQL4-209ENST00000617875 LOC107984640A0A0U1RRK4 108 aa11.41□□□□□ -0.58
RECQL4-209ENST00000617875 SOSTDC1Q6X4U4 206 aa11.41□□□□□ -0.58
RECQL4-209ENST00000617875 FAM110AQ9BQ89 295 aa11.4□□□□□ -0.58
RECQL4-209ENST00000617875 TRBV6-8A0A0A6YYG3 113 aa11.4□□□□□ -0.58
RECQL4-209ENST00000617875 TRBV10-1A0A0K0K1A3 114 aa11.4□□□□□ -0.58
RECQL4-209ENST00000617875 NHLRC4P0CG21 123 aaPredicted RBP11.4□□□□□ -0.59
RECQL4-209ENST00000617875 HIGD2BQ4VC39 106 aa11.4□□□□□ -0.59
RECQL4-209ENST00000617875 RNF152Q8N8N0 203 aa11.4□□□□□ -0.59
RECQL4-209ENST00000617875 A0A087WYN8 130 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms