RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 NHP2Q9NX24 153 aaKnown RBP6□□□□□ -1.45
GPC6-202ENST00000617456 Q9UF83 564 aa6□□□□□ -1.45
GPC6-202ENST00000617456 DNAH5Q8TE73 4624 aa5.99□□□□□ -1.45
GPC6-202ENST00000617456 TRBV20OR9-2A0A075B6H5 130 aa5.99□□□□□ -1.45
GPC6-202ENST00000617456 TRBV7-6A0A0J9YX20 115 aa5.99□□□□□ -1.45
GPC6-202ENST00000617456 NBDYA0A0U1RRE5 68 aa5.99□□□□□ -1.45
GPC6-202ENST00000617456 LCE2BO14633 110 aa5.99□□□□□ -1.45
GPC6-202ENST00000617456 COX7A2P2O60397 106 aa5.99□□□□□ -1.45
GPC6-202ENST00000617456 TCL1BO95988 128 aa5.99□□□□□ -1.45
GPC6-202ENST00000617456 PDE6HQ13956 83 aa5.99□□□□□ -1.45
GPC6-202ENST00000617456 C10orf113Q5VZT2 155 aa5.99□□□□□ -1.45
GPC6-202ENST00000617456 C16orf74Q96GX8 76 aa5.99□□□□□ -1.45
GPC6-202ENST00000617456 WDR83OSQ9Y284 106 aa5.99□□□□□ -1.45
GPC6-202ENST00000617456 H3BT86 120 aa5.98□□□□□ -1.45
GPC6-202ENST00000617456 SPINK13Q1W4C9 94 aa5.98□□□□□ -1.45
GPC6-202ENST00000617456 LINC01561Q8N1V8 128 aa5.98□□□□□ -1.45
GPC6-202ENST00000617456 RNF182Q8N6D2 247 aa5.98□□□□□ -1.45
GPC6-202ENST00000617456 TMEM263Q8WUH6 116 aaKnown RBP5.98□□□□□ -1.45
GPC6-202ENST00000617456 ZNF503Q96F45 646 aa5.98□□□□□ -1.45
GPC6-202ENST00000617456 AAMDCQ9H7C9 122 aa5.98□□□□□ -1.45
GPC6-202ENST00000617456 TMEM14CQ9P0S9 112 aa5.98□□□□□ -1.45
GPC6-202ENST00000617456 TIMM8BQ9Y5J9 83 aaPredicted RBP5.98□□□□□ -1.45
GPC6-202ENST00000617456 TRGV11A0A075B6L2 103 aa5.97□□□□□ -1.45
GPC6-202ENST00000617456 TRBV19A0A075B6N1 114 aa5.97□□□□□ -1.45
GPC6-202ENST00000617456 A0A1B0GXF2 115 aa5.97□□□□□ -1.45
GPC6-202ENST00000617456 PLAC8L1A1L4L8 177 aa5.97□□□□□ -1.45
GPC6-202ENST00000617456 H3BS24 57 aa5.97□□□□□ -1.45
GPC6-202ENST00000617456 LINC00643Q86TS7 51 aa5.97□□□□□ -1.45
GPC6-202ENST00000617456 FMC1Q96HJ9 113 aa5.97□□□□□ -1.45
GPC6-202ENST00000617456 HHLA3Q9XRX5 114 aa5.97□□□□□ -1.45
GPC6-202ENST00000617456 TRBV7-3A0A075B6L6 115 aa5.96□□□□□ -1.46
GPC6-202ENST00000617456 C19orf71A6NCJ1 209 aa5.96□□□□□ -1.46
GPC6-202ENST00000617456 H3BNG1 76 aa5.96□□□□□ -1.46
GPC6-202ENST00000617456 UBE2D1P51668 147 aa5.96□□□□□ -1.46
GPC6-202ENST00000617456 NPC2P61916 151 aa5.96□□□□□ -1.46
GPC6-202ENST00000617456 IGFL4Q6B9Z1 124 aa5.96□□□□□ -1.46
GPC6-202ENST00000617456 LINC00173Q6ZV60 143 aa5.96□□□□□ -1.46
GPC6-202ENST00000617456 MRPL55Q7Z7F7 128 aaKnown RBP5.96□□□□□ -1.46
GPC6-202ENST00000617456 PCP2Q8IVA1 136 aa5.96□□□□□ -1.46
GPC6-202ENST00000617456 SERP2Q8N6R1 65 aa5.96□□□□□ -1.46
GPC6-202ENST00000617456 LINC00612Q8N6U2 182 aa5.96□□□□□ -1.46
GPC6-202ENST00000617456 IFI27L1Q96BM0 104 aa5.96□□□□□ -1.46
GPC6-202ENST00000617456 LINC00467Q9BRT7 94 aa5.96□□□□□ -1.46
GPC6-202ENST00000617456 OTORQ9NRC9 128 aa5.96□□□□□ -1.46
GPC6-202ENST00000617456 TRBV25-1A0A075B6N4 114 aa5.95□□□□□ -1.46
GPC6-202ENST00000617456 TRAV8-1A0A0A6YYK1 113 aa5.95□□□□□ -1.46
GPC6-202ENST00000617456 K7ERJ3 54 aa5.95□□□□□ -1.46
GPC6-202ENST00000617456 P01737 135 aa5.95□□□□□ -1.46
GPC6-202ENST00000617456 INAFM2P0DMQ5 153 aa5.95□□□□□ -1.46
GPC6-202ENST00000617456 KRTAP10-2P60368 255 aa5.95□□□□□ -1.46
GPC6-202ENST00000617456 DAZ2Q13117 558 aaKnown RBP5.95□□□□□ -1.46
GPC6-202ENST00000617456 FLG2Q5D862 2391 aaPredicted RBP5.95□□□□□ -1.46
GPC6-202ENST00000617456 hADV29S1A0JD25 119 aa5.94□□□□□ -1.46
GPC6-202ENST00000617456 SLC25A20O43772 301 aa5.94□□□□□ -1.46
GPC6-202ENST00000617456 PRM2P04554 102 aa5.94□□□□□ -1.46
GPC6-202ENST00000617456 DEFB130BP0DP73 79 aa5.94□□□□□ -1.46
GPC6-202ENST00000617456 DEFB130AP0DP74 79 aa5.94□□□□□ -1.46
GPC6-202ENST00000617456 CCL18P55774 89 aa5.94□□□□□ -1.46
GPC6-202ENST00000617456 ERCC8Q13216 396 aa5.94□□□□□ -1.46
GPC6-202ENST00000617456 MIC13Q5XKP0 118 aa5.94□□□□□ -1.46
GPC6-202ENST00000617456 LYPD1Q8N2G4 141 aa5.94□□□□□ -1.46
GPC6-202ENST00000617456 DSCR8Q96T75 97 aa5.94□□□□□ -1.46
GPC6-202ENST00000617456 NPCDR1Q9BY65 106 aa5.94□□□□□ -1.46
GPC6-202ENST00000617456 LINC00588Q9Y4M8 146 aa5.94□□□□□ -1.46
GPC6-202ENST00000617456 KLLNB2CW77 178 aa5.93□□□□□ -1.46
GPC6-202ENST00000617456 UBE2L3P68036 154 aaKnown RBP5.93□□□□□ -1.46
GPC6-202ENST00000617456 MORN5Q5VZ52 161 aa5.93□□□□□ -1.46
GPC6-202ENST00000617456 C9orf47Q6ZRZ4 202 aa5.93□□□□□ -1.46
GPC6-202ENST00000617456 EPDR1Q9UM22 224 aa5.93□□□□□ -1.46
GPC6-202ENST00000617456 SRRM2Q9UQ35 2752 aaKnown RBP5.92□□□□□ -1.46
GPC6-202ENST00000617456 UBE2L5PA0A1B0GUS4 154 aa5.92□□□□□ -1.46
GPC6-202ENST00000617456 PRAC2D3DTV9 90 aa5.92□□□□□ -1.46
GPC6-202ENST00000617456 SERTAD4-AS1Q5TG53 156 aa5.92□□□□□ -1.46
GPC6-202ENST00000617456 LENEPQ9Y5L5 61 aa5.92□□□□□ -1.46
GPC6-202ENST00000617456 MGST1P10620 155 aaKnown RBP5.91□□□□□ -1.46
GPC6-202ENST00000617456 FUSP35637 526 aaKnown RBP eCLIP5.91□□□□□ -1.46
GPC6-202ENST00000617456 PSMB2P49721 201 aa5.91□□□□□ -1.46
GPC6-202ENST00000617456 ATP5EP56381 51 aaPredicted RBP5.91□□□□□ -1.46
GPC6-202ENST00000617456 RPL18AQ02543 176 aaKnown RBP5.91□□□□□ -1.46
GPC6-202ENST00000617456 DAZ4Q86SG3 579 aaKnown RBP5.91□□□□□ -1.46
GPC6-202ENST00000617456 KRTAP1-5Q9BYS1 174 aa5.91□□□□□ -1.46
GPC6-202ENST00000617456 Q9H8V8 135 aa5.91□□□□□ -1.46
GPC6-202ENST00000617456 NOP10Q9NPE3 64 aaKnown RBP5.91□□□□□ -1.46
GPC6-202ENST00000617456 NXT2Q9NPJ8 142 aaKnown RBP5.91□□□□□ -1.46
GPC6-202ENST00000617456 DAZ3Q9NR90 486 aaKnown RBP5.91□□□□□ -1.46
GPC6-202ENST00000617456 PGPA6NDG6 321 aa5.9□□□□□ -1.46
GPC6-202ENST00000617456 BCE1O60756 84 aa5.9□□□□□ -1.46
GPC6-202ENST00000617456 HTN1P15515 57 aa5.9□□□□□ -1.46
GPC6-202ENST00000617456 FP248Q71RG6 208 aaPredicted RBP5.9□□□□□ -1.46
GPC6-202ENST00000617456 FAM167A-AS1Q96KT0 104 aa5.9□□□□□ -1.46
GPC6-202ENST00000617456 FAT1Q14517 4588 aa5.9□□□□□ -1.46
GPC6-202ENST00000617456 TRAV12-3A0A0B4J271 114 aa5.89□□□□□ -1.47
GPC6-202ENST00000617456 TRBV10-2A0A0K0K1G8 114 aa5.89□□□□□ -1.47
GPC6-202ENST00000617456 BRK1Q8WUW1 75 aa5.89□□□□□ -1.47
GPC6-202ENST00000617456 PAXXQ9BUH6 204 aa5.89□□□□□ -1.47
GPC6-202ENST00000617456 ZNF492Q9P255 531 aa5.89□□□□□ -1.47
GPC6-202ENST00000617456 IGHV1-58A0A0C4DH39 117 aa5.88□□□□□ -1.47
GPC6-202ENST00000617456 A0A0J9YY99 117 aa5.88□□□□□ -1.47
GPC6-202ENST00000617456 M0R3E3 92 aa5.88□□□□□ -1.47
GPC6-202ENST00000617456 SPINK4O60575 86 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 538.3 ms