RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 SS18Q15532 418 aa9.9□□□□□ -0.82
UBXN1-218ENST00000616865 ENHOQ6UWT2 76 aa9.9□□□□□ -0.82
UBXN1-218ENST00000616865 TM2D2Q9BX73 214 aa9.9□□□□□ -0.82
UBXN1-218ENST00000616865 PRR34Q9NV39 138 aa9.9□□□□□ -0.82
UBXN1-218ENST00000616865 TRAV13-1A0A0B4J241 112 aa9.89□□□□□ -0.83
UBXN1-218ENST00000616865 TRAV8-4A0A0B4J246 113 aa9.89□□□□□ -0.83
UBXN1-218ENST00000616865 LEPROTL1O95214 131 aa9.89□□□□□ -0.83
UBXN1-218ENST00000616865 PDZD11Q5EBL8 140 aa9.89□□□□□ -0.83
UBXN1-218ENST00000616865 COX11Q9Y6N1 276 aa9.89□□□□□ -0.83
UBXN1-218ENST00000616865 IGLV10-54A0A075B6I4 117 aa9.88□□□□□ -0.83
UBXN1-218ENST00000616865 FABP4P15090 132 aa9.88□□□□□ -0.83
UBXN1-218ENST00000616865 COA6Q5JTJ3 125 aaKnown RBP9.88□□□□□ -0.83
UBXN1-218ENST00000616865 HSPB8Q9UJY1 196 aa9.88□□□□□ -0.83
UBXN1-218ENST00000616865 LINC00959A0A1B0GUT2 108 aa9.87□□□□□ -0.83
UBXN1-218ENST00000616865 IFI27L1Q96BM0 104 aa9.87□□□□□ -0.83
UBXN1-218ENST00000616865 CCL25O15444 150 aa9.86□□□□□ -0.83
UBXN1-218ENST00000616865 PRSS1P07477 247 aa9.86□□□□□ -0.83
UBXN1-218ENST00000616865 ZC2HC1BQ5TFG8 222 aa9.86□□□□□ -0.83
UBXN1-218ENST00000616865 SMR3BP02814 79 aaPredicted RBP9.85□□□□□ -0.83
UBXN1-218ENST00000616865 GCSHP23434 173 aa9.85□□□□□ -0.83
UBXN1-218ENST00000616865 S100A2P29034 98 aa9.85□□□□□ -0.83
UBXN1-218ENST00000616865 XCL1P47992 114 aa9.85□□□□□ -0.83
UBXN1-218ENST00000616865 PMVKQ15126 192 aa9.85□□□□□ -0.83
UBXN1-218ENST00000616865 BAALCQ8WXS3 180 aa9.85□□□□□ -0.83
UBXN1-218ENST00000616865 CHCHD10Q8WYQ3 142 aaPredicted RBP9.85□□□□□ -0.83
UBXN1-218ENST00000616865 AMELXQ99217 191 aa9.85□□□□□ -0.83
UBXN1-218ENST00000616865 GAGE12HA6NDE8 117 aa9.84□□□□□ -0.83
UBXN1-218ENST00000616865 FAM104AQ969W3 186 aa9.84□□□□□ -0.83
UBXN1-218ENST00000616865 TMA7Q9Y2S6 64 aaKnown RBP9.84□□□□□ -0.83
UBXN1-218ENST00000616865 H0Y8G0 127 aa9.83□□□□□ -0.84
UBXN1-218ENST00000616865 LINC00173Q6ZV60 143 aa9.83□□□□□ -0.84
UBXN1-218ENST00000616865 PACRGQ96M98 296 aaPredicted RBP9.83□□□□□ -0.84
UBXN1-218ENST00000616865 MAP1LC3CQ9BXW4 147 aa9.83□□□□□ -0.84
UBXN1-218ENST00000616865 CST9LQ9H4G1 147 aa9.83□□□□□ -0.84
UBXN1-218ENST00000616865 DNAH8Q96JB1 4490 aa9.82□□□□□ -0.84
UBXN1-218ENST00000616865 UBE2D1P51668 147 aa9.82□□□□□ -0.84
UBXN1-218ENST00000616865 SEC11AP67812 179 aa9.82□□□□□ -0.84
UBXN1-218ENST00000616865 HAMPP81172 84 aa9.82□□□□□ -0.84
UBXN1-218ENST00000616865 GEMIN7Q9H840 131 aaKnown RBP9.82□□□□□ -0.84
UBXN1-218ENST00000616865 FAM229AH3BQW9 127 aa9.81□□□□□ -0.84
UBXN1-218ENST00000616865 SNRPEP62304 92 aaKnown RBP9.81□□□□□ -0.84
UBXN1-218ENST00000616865 CD164L2Q6UWJ8 174 aa9.81□□□□□ -0.84
UBXN1-218ENST00000616865 SRRM2Q9UQ35 2752 aaKnown RBP9.8□□□□□ -0.84
UBXN1-218ENST00000616865 IGLV5-52A0A0A0MRZ9 124 aa9.8□□□□□ -0.84
UBXN1-218ENST00000616865 HIST3H2BBQ8N257 126 aa9.8□□□□□ -0.84
UBXN1-218ENST00000616865 CHTOPQ9Y3Y2 248 aaKnown RBP9.8□□□□□ -0.84
UBXN1-218ENST00000616865 FLG2Q5D862 2391 aaPredicted RBP9.8□□□□□ -0.84
UBXN1-218ENST00000616865 TRAV12-1A0A0B4J245 112 aa9.79□□□□□ -0.84
UBXN1-218ENST00000616865 A0A0J9YXV3 536 aa9.79□□□□□ -0.84
UBXN1-218ENST00000616865 COX7A2LO14548 114 aa9.79□□□□□ -0.84
UBXN1-218ENST00000616865 MALP21145 153 aa9.79□□□□□ -0.84
UBXN1-218ENST00000616865 HERVK_113P63121 156 aa9.79□□□□□ -0.84
UBXN1-218ENST00000616865 LINC00242Q5T6M2 205 aa9.79□□□□□ -0.84
UBXN1-218ENST00000616865 NTN5Q8WTR8 489 aaPredicted RBP9.79□□□□□ -0.84
UBXN1-218ENST00000616865 FOXI1Q12951 378 aa9.78□□□□□ -0.84
UBXN1-218ENST00000616865 CFAP161Q6P656 301 aa9.78□□□□□ -0.84
UBXN1-218ENST00000616865 TINCRA0A1B0GVN0 87 aa9.77□□□□□ -0.85
UBXN1-218ENST00000616865 LRCOL1A6NCL2 159 aa9.77□□□□□ -0.85
UBXN1-218ENST00000616865 LECT2O14960 151 aa9.77□□□□□ -0.85
UBXN1-218ENST00000616865 KRTDAPP60985 99 aa9.77□□□□□ -0.85
UBXN1-218ENST00000616865 KRTAP26-1Q6PEX3 210 aa9.77□□□□□ -0.85
UBXN1-218ENST00000616865 C5orf38Q86SI9 138 aa9.77□□□□□ -0.85
UBXN1-218ENST00000616865 LINC00469Q8N7U9 141 aa9.77□□□□□ -0.85
UBXN1-218ENST00000616865 C5orf52A6NGY3 159 aa9.76□□□□□ -0.85
UBXN1-218ENST00000616865 APOMO95445 188 aa9.76□□□□□ -0.85
UBXN1-218ENST00000616865 COX6A2Q02221 97 aa9.76□□□□□ -0.85
UBXN1-218ENST00000616865 FAM19A3Q7Z5A8 133 aa9.76□□□□□ -0.85
UBXN1-218ENST00000616865 CHAC1Q9BUX1 264 aa9.76□□□□□ -0.85
UBXN1-218ENST00000616865 USP17L23D6RBM5 183 aa9.75□□□□□ -0.85
UBXN1-218ENST00000616865 F8VRH5 84 aa9.75□□□□□ -0.85
UBXN1-218ENST00000616865 C14orf177Q52M58 125 aa9.75□□□□□ -0.85
UBXN1-218ENST00000616865 Q8N814 137 aa9.75□□□□□ -0.85
UBXN1-218ENST00000616865 HIST1H2BLQ99880 126 aa9.75□□□□□ -0.85
UBXN1-218ENST00000616865 IGHV3OR16-9A0A0B4J2B5 98 aa9.74□□□□□ -0.85
UBXN1-218ENST00000616865 IGHV1-58A0A0C4DH39 117 aa9.74□□□□□ -0.85
UBXN1-218ENST00000616865 H3BRM9 83 aa9.74□□□□□ -0.85
UBXN1-218ENST00000616865 SYS1-DBNDD2H3BUS1 97 aa9.74□□□□□ -0.85
UBXN1-218ENST00000616865 J3QL48 77 aa9.74□□□□□ -0.85
UBXN1-218ENST00000616865 C3orf79P0CE67 100 aa9.74□□□□□ -0.85
UBXN1-218ENST00000616865 IGLC3P0DOY3 106 aa9.74□□□□□ -0.85
UBXN1-218ENST00000616865 PET117Q6UWS5 81 aa9.74□□□□□ -0.85
UBXN1-218ENST00000616865 MRPL35Q9NZE8 188 aaKnown RBP9.74□□□□□ -0.85
UBXN1-218ENST00000616865 C20orf202A1L168 122 aa9.73□□□□□ -0.85
UBXN1-218ENST00000616865 ODF1Q14990 250 aa9.73□□□□□ -0.85
UBXN1-218ENST00000616865 TMEM170BQ5T4T1 132 aa9.73□□□□□ -0.85
UBXN1-218ENST00000616865 CDKN2A-AS1Q9UH64 79 aa9.73□□□□□ -0.85
UBXN1-218ENST00000616865 IGLV4-69A0A075B6H9 119 aa9.72□□□□□ -0.85
UBXN1-218ENST00000616865 A0A087WZ39 114 aa9.72□□□□□ -0.85
UBXN1-218ENST00000616865 DPM2O94777 84 aa9.72□□□□□ -0.85
UBXN1-218ENST00000616865 PLNP26678 52 aa9.72□□□□□ -0.85
UBXN1-218ENST00000616865 PMCHL2Q9BQD1 86 aa9.72□□□□□ -0.85
UBXN1-218ENST00000616865 FAM30AQ9NZY2 134 aa9.72□□□□□ -0.85
UBXN1-218ENST00000616865 hDV102S1A0JD36 115 aa9.71□□□□□ -0.86
UBXN1-218ENST00000616865 C11orf86A6NJI1 115 aa9.71□□□□□ -0.86
UBXN1-218ENST00000616865 HIGD2BQ4VC39 106 aa9.71□□□□□ -0.86
UBXN1-218ENST00000616865 LINC01561Q8N1V8 128 aa9.71□□□□□ -0.86
UBXN1-218ENST00000616865 ORAOV1Q8WV07 137 aa9.71□□□□□ -0.86
UBXN1-218ENST00000616865 ZNF561-AS1K7EIQ3 104 aa9.7□□□□□ -0.86
UBXN1-218ENST00000616865 IGKCP01834 107 aa9.7□□□□□ -0.86
UBXN1-218ENST00000616865 WFDC2Q14508 124 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms