RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 WFDC9Q8NEX5 89 aa9.71□□□□□ -0.85
PCDHA11-202ENST00000616325 INAFM2P0DMQ5 153 aa9.71□□□□□ -0.86
PCDHA11-202ENST00000616325 K7EQG2 157 aa9.7□□□□□ -0.86
PCDHA11-202ENST00000616325 MALP21145 153 aa9.7□□□□□ -0.86
PCDHA11-202ENST00000616325 DYNLRB2Q8TF09 96 aa9.7□□□□□ -0.86
PCDHA11-202ENST00000616325 FAM104AQ969W3 186 aa9.7□□□□□ -0.86
PCDHA11-202ENST00000616325 PSMB8P28062 276 aa9.7□□□□□ -0.86
PCDHA11-202ENST00000616325 C9orf129Q5T035 196 aaKnown RBP9.7□□□□□ -0.86
PCDHA11-202ENST00000616325 UBE2D4Q9Y2X8 147 aa9.7□□□□□ -0.86
PCDHA11-202ENST00000616325 B4DSR2 109 aa9.69□□□□□ -0.86
PCDHA11-202ENST00000616325 GCN1Q92616 2671 aaKnown RBP9.69□□□□□ -0.86
PCDHA11-202ENST00000616325 NCR3O14931 201 aa9.69□□□□□ -0.86
PCDHA11-202ENST00000616325 CRPP02741 224 aa9.68□□□□□ -0.86
PCDHA11-202ENST00000616325 PYGO1Q9Y3Y4 419 aa9.68□□□□□ -0.86
PCDHA11-202ENST00000616325 TRGV1A0A0A0MS02 117 aa9.68□□□□□ -0.86
PCDHA11-202ENST00000616325 NDUFA1O15239 70 aa9.68□□□□□ -0.86
PCDHA11-202ENST00000616325 LINC00158P58513 81 aa9.68□□□□□ -0.86
PCDHA11-202ENST00000616325 LINC01600Q96MT4 127 aa9.68□□□□□ -0.86
PCDHA11-202ENST00000616325 C11orf68Q9H3H3 251 aaKnown RBP9.68□□□□□ -0.86
PCDHA11-202ENST00000616325 H3BUA1 57 aa9.67□□□□□ -0.86
PCDHA11-202ENST00000616325 RPL18AQ02543 176 aaKnown RBP9.67□□□□□ -0.86
PCDHA11-202ENST00000616325 CHCHD7Q9BUK0 85 aa9.67□□□□□ -0.86
PCDHA11-202ENST00000616325 LINC00846Q9NV44 126 aa9.67□□□□□ -0.86
PCDHA11-202ENST00000616325 C2orf48Q96LS8 159 aa9.67□□□□□ -0.86
PCDHA11-202ENST00000616325 PFN2P35080 140 aa9.66□□□□□ -0.86
PCDHA11-202ENST00000616325 FLNAP21333 2647 aaKnown RBP9.66□□□□□ -0.86
PCDHA11-202ENST00000616325 TRAV23DV6A0A075B6W5 121 aa9.66□□□□□ -0.86
PCDHA11-202ENST00000616325 C5orf38Q86SI9 138 aa9.66□□□□□ -0.86
PCDHA11-202ENST00000616325 DPH3Q96FX2 82 aa9.66□□□□□ -0.86
PCDHA11-202ENST00000616325 K7EMT4 169 aa9.66□□□□□ -0.86
PCDHA11-202ENST00000616325 LECT2O14960 151 aa9.66□□□□□ -0.86
PCDHA11-202ENST00000616325 A0A087WYN8 130 aa9.65□□□□□ -0.86
PCDHA11-202ENST00000616325 USP17L23D6RBM5 183 aa9.65□□□□□ -0.86
PCDHA11-202ENST00000616325 CRYGAP11844 174 aa9.65□□□□□ -0.86
PCDHA11-202ENST00000616325 HILS1P60008 231 aa9.65□□□□□ -0.86
PCDHA11-202ENST00000616325 KLK9Q2XQG4 91 aa9.65□□□□□ -0.86
PCDHA11-202ENST00000616325 HIST2H2BCQ6DN03 193 aa9.64□□□□□ -0.87
PCDHA11-202ENST00000616325 MIR7-3HGQ8N6C7 128 aa9.64□□□□□ -0.87
PCDHA11-202ENST00000616325 PAX4O43316 350 aa9.64□□□□□ -0.87
PCDHA11-202ENST00000616325 RPL36AP83881 106 aaKnown RBP9.64□□□□□ -0.87
PCDHA11-202ENST00000616325 RPL36ALQ969Q0 106 aaKnown RBP9.64□□□□□ -0.87
PCDHA11-202ENST00000616325 RBMY1BA6NDE4 496 aaKnown RBP9.63□□□□□ -0.87
PCDHA11-202ENST00000616325 RBMY1EA6NEQ0 496 aaKnown RBP9.63□□□□□ -0.87
PCDHA11-202ENST00000616325 PRB1P04280 392 aa9.63□□□□□ -0.87
PCDHA11-202ENST00000616325 RBMY1DP0C7P1 496 aaKnown RBP9.63□□□□□ -0.87
PCDHA11-202ENST00000616325 CXCL5P42830 114 aa9.63□□□□□ -0.87
PCDHA11-202ENST00000616325 LINC00242Q5T6M2 205 aa9.63□□□□□ -0.87
PCDHA11-202ENST00000616325 SERP2Q8N6R1 65 aa9.63□□□□□ -0.87
PCDHA11-202ENST00000616325 SND1-IT1Q9HBX3 110 aa9.63□□□□□ -0.87
PCDHA11-202ENST00000616325 F5H768 121 aa9.63□□□□□ -0.87
PCDHA11-202ENST00000616325 ZNF415Q09FC8 603 aa9.62□□□□□ -0.87
PCDHA11-202ENST00000616325 TIMM17BO60830 172 aa9.62□□□□□ -0.87
PCDHA11-202ENST00000616325 COPS9Q8WXC6 57 aa9.62□□□□□ -0.87
PCDHA11-202ENST00000616325 SETXQ7Z333 2677 aaKnown RBP9.62□□□□□ -0.87
PCDHA11-202ENST00000616325 C20orf197Q8N268 126 aa9.61□□□□□ -0.87
PCDHA11-202ENST00000616325 C22orf24Q9Y442 160 aa9.61□□□□□ -0.87
PCDHA11-202ENST00000616325 OXTP01178 125 aa9.6□□□□□ -0.87
PCDHA11-202ENST00000616325 LINC00337Q8N6G1 96 aa9.6□□□□□ -0.87
PCDHA11-202ENST00000616325 SMIM11BQ8TCY0 68 aa9.6□□□□□ -0.87
PCDHA11-202ENST00000616325 SMIM1B2RUZ4 78 aa9.6□□□□□ -0.87
PCDHA11-202ENST00000616325 TRAV25A0A0B4J276 109 aa9.59□□□□□ -0.87
PCDHA11-202ENST00000616325 GHRHP01286 108 aa9.59□□□□□ -0.87
PCDHA11-202ENST00000616325 TRAV13-2A0A0B4J235 113 aa9.59□□□□□ -0.87
PCDHA11-202ENST00000616325 TMEM258P61165 79 aa9.59□□□□□ -0.87
PCDHA11-202ENST00000616325 BEAN1Q3B7T3 259 aa9.59□□□□□ -0.87
PCDHA11-202ENST00000616325 LINC01561Q8N1V8 128 aa9.59□□□□□ -0.87
PCDHA11-202ENST00000616325 PLA2G2AP14555 144 aa9.59□□□□□ -0.87
PCDHA11-202ENST00000616325 STHQ8IWL8 128 aa9.58□□□□□ -0.88
PCDHA11-202ENST00000616325 LINC01356Q8N9X3 169 aa9.58□□□□□ -0.88
PCDHA11-202ENST00000616325 ITPR3Q14573 2671 aa9.58□□□□□ -0.88
PCDHA11-202ENST00000616325 UBE2L6O14933 153 aa9.58□□□□□ -0.88
PCDHA11-202ENST00000616325 RPL35AP18077 110 aaKnown RBP9.57□□□□□ -0.88
PCDHA11-202ENST00000616325 Q6ZTI0 123 aa9.57□□□□□ -0.88
PCDHA11-202ENST00000616325 FAM19A1Q7Z5A9 133 aa9.57□□□□□ -0.88
PCDHA11-202ENST00000616325 WFDC10AQ9H1F0 79 aa9.57□□□□□ -0.88
PCDHA11-202ENST00000616325 AKAP9Q99996 3911 aa9.57□□□□□ -0.88
PCDHA11-202ENST00000616325 ENHOQ6UWT2 76 aa9.57□□□□□ -0.88
PCDHA11-202ENST00000616325 TMEM243Q9BU79 118 aa9.57□□□□□ -0.88
PCDHA11-202ENST00000616325 TRGV2A0A075B6R0 118 aa9.57□□□□□ -0.88
PCDHA11-202ENST00000616325 MAP6D1Q9H9H5 199 aa9.57□□□□□ -0.88
PCDHA11-202ENST00000616325 RPS28P62857 69 aaKnown RBP9.56□□□□□ -0.88
PCDHA11-202ENST00000616325 FHL2Q14192 279 aa9.56□□□□□ -0.88
PCDHA11-202ENST00000616325 NOP10Q9NPE3 64 aaKnown RBP9.56□□□□□ -0.88
PCDHA11-202ENST00000616325 INSP01308 110 aa9.56□□□□□ -0.88
PCDHA11-202ENST00000616325 LOC100131303A0A0U1RQF7 123 aa9.56□□□□□ -0.88
PCDHA11-202ENST00000616325 ZNF702PQ9H963 129 aa9.55□□□□□ -0.88
PCDHA11-202ENST00000616325 Q96MF0 132 aa9.54□□□□□ -0.88
PCDHA11-202ENST00000616325 C1orf43Q9BWL3 253 aa9.54□□□□□ -0.88
PCDHA11-202ENST00000616325 CLPSL2Q6UWE3 100 aa9.54□□□□□ -0.88
PCDHA11-202ENST00000616325 FAM222AQ5U5X8 452 aa9.54□□□□□ -0.88
PCDHA11-202ENST00000616325 ZNF469Q96JG9 3925 aaPredicted RBP9.53□□□□□ -0.88
PCDHA11-202ENST00000616325 IGLV5-39A0A0G2JS06 123 aa9.53□□□□□ -0.88
PCDHA11-202ENST00000616325 RPL28P46779 137 aaKnown RBP9.53□□□□□ -0.88
PCDHA11-202ENST00000616325 APCP25054 2843 aa9.53□□□□□ -0.88
PCDHA11-202ENST00000616325 A0A096LPF7 62 aa9.53□□□□□ -0.88
PCDHA11-202ENST00000616325 KRTAP10-9P60411 292 aa9.53□□□□□ -0.88
PCDHA11-202ENST00000616325 IGKV2-28A0A075B6P5 120 aa9.53□□□□□ -0.88
PCDHA11-202ENST00000616325 IGKV2D-28P01615 120 aa9.53□□□□□ -0.88
PCDHA11-202ENST00000616325 PKIGQ9Y2B9 76 aa9.53□□□□□ -0.88
PCDHA11-202ENST00000616325 PRR3P79522 188 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms