RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 DYNLRB2Q8TF09 96 aa9.53□□□□□ -0.88
FOXN3-219ENST00000615335 TP53TG1Q9Y2A0 90 aa9.53□□□□□ -0.88
FOXN3-219ENST00000615335 CLEC2BQ92478 149 aa9.52□□□□□ -0.89
FOXN3-219ENST00000615335 UPK3BQ9BT76 320 aa9.52□□□□□ -0.89
FOXN3-219ENST00000615335 TIMM21Q9BVV7 248 aa9.52□□□□□ -0.89
FOXN3-219ENST00000615335 NOTCH3Q9UM47 2321 aa9.52□□□□□ -0.89
FOXN3-219ENST00000615335 TRAV8-3A0A0A6YYJ7 113 aa9.52□□□□□ -0.89
FOXN3-219ENST00000615335 NXPH4O95158 308 aa9.52□□□□□ -0.89
FOXN3-219ENST00000615335 LINC00482Q8N8I6 264 aa9.52□□□□□ -0.89
FOXN3-219ENST00000615335 TINCRA0A1B0GVN0 87 aa9.51□□□□□ -0.89
FOXN3-219ENST00000615335 KLLNB2CW77 178 aa9.51□□□□□ -0.89
FOXN3-219ENST00000615335 I3L3M4 83 aa9.51□□□□□ -0.89
FOXN3-219ENST00000615335 KIF25-AS1Q9Y6Z4 181 aa9.51□□□□□ -0.89
FOXN3-219ENST00000615335 A0A0J9YXY3 114 aa9.5□□□□□ -0.89
FOXN3-219ENST00000615335 INAFM2P0DMQ5 153 aa9.5□□□□□ -0.89
FOXN3-219ENST00000615335 LINC00315P59091 139 aa9.5□□□□□ -0.89
FOXN3-219ENST00000615335 CYSTM1Q9H1C7 97 aa9.5□□□□□ -0.89
FOXN3-219ENST00000615335 SORL1Q92673 2214 aa9.49□□□□□ -0.89
FOXN3-219ENST00000615335 RHOHQ15669 191 aa9.49□□□□□ -0.89
FOXN3-219ENST00000615335 DEFB114Q30KQ6 69 aa9.49□□□□□ -0.89
FOXN3-219ENST00000615335 TMEM61Q8N0U2 210 aa9.48□□□□□ -0.89
FOXN3-219ENST00000615335 C1orf43Q9BWL3 253 aa9.48□□□□□ -0.89
FOXN3-219ENST00000615335 MUC4Q99102 2169 aa9.48□□□□□ -0.89
FOXN3-219ENST00000615335 PFN2P35080 140 aa9.48□□□□□ -0.89
FOXN3-219ENST00000615335 MDFIQ99750 246 aa9.48□□□□□ -0.89
FOXN3-219ENST00000615335 NDUFC2O95298 119 aa9.47□□□□□ -0.89
FOXN3-219ENST00000615335 SUMO4Q6EEV6 95 aa9.47□□□□□ -0.89
FOXN3-219ENST00000615335 SPATA3Q8NHX4 192 aa9.47□□□□□ -0.89
FOXN3-219ENST00000615335 TRAV12-3A0A0B4J271 114 aa9.47□□□□□ -0.89
FOXN3-219ENST00000615335 F5H697 171 aa9.47□□□□□ -0.89
FOXN3-219ENST00000615335 A0A087WWL8 130 aa9.46□□□□□ -0.89
FOXN3-219ENST00000615335 VCYO14598 125 aa9.46□□□□□ -0.89
FOXN3-219ENST00000615335 POLR2KP53803 58 aaKnown RBP9.46□□□□□ -0.89
FOXN3-219ENST00000615335 LITAFQ99732 161 aa9.46□□□□□ -0.89
FOXN3-219ENST00000615335 MIAQ16674 131 aa9.46□□□□□ -0.9
FOXN3-219ENST00000615335 PRSS2P07478 247 aa9.45□□□□□ -0.9
FOXN3-219ENST00000615335 SEC61GP60059 68 aa9.45□□□□□ -0.9
FOXN3-219ENST00000615335 NPC2P61916 151 aa9.45□□□□□ -0.9
FOXN3-219ENST00000615335 FAM222AQ5U5X8 452 aa9.45□□□□□ -0.9
FOXN3-219ENST00000615335 IGLV1-51P01701 117 aa9.45□□□□□ -0.9
FOXN3-219ENST00000615335 DEFB104AQ8WTQ1 72 aa9.45□□□□□ -0.9
FOXN3-219ENST00000615335 K7EQG2 157 aa9.44□□□□□ -0.9
FOXN3-219ENST00000615335 SNRPD3P62318 126 aaKnown RBP9.44□□□□□ -0.9
FOXN3-219ENST00000615335 C9orf85Q96MD7 179 aa9.44□□□□□ -0.9
FOXN3-219ENST00000615335 RS1O15537 224 aa9.44□□□□□ -0.9
FOXN3-219ENST00000615335 RPL39P62891 51 aaKnown RBP9.44□□□□□ -0.9
FOXN3-219ENST00000615335 ZNF415Q09FC8 603 aa9.44□□□□□ -0.9
FOXN3-219ENST00000615335 DAZ2Q13117 558 aaKnown RBP9.44□□□□□ -0.9
FOXN3-219ENST00000615335 C9orf66Q5T8R8 295 aa9.44□□□□□ -0.9
FOXN3-219ENST00000615335 Q6JHZ5 121 aa9.44□□□□□ -0.9
FOXN3-219ENST00000615335 DAZ4Q86SG3 579 aaKnown RBP9.44□□□□□ -0.9
FOXN3-219ENST00000615335 WFDC9Q8NEX5 89 aa9.44□□□□□ -0.9
FOXN3-219ENST00000615335 DAZ3Q9NR90 486 aaKnown RBP9.44□□□□□ -0.9
FOXN3-219ENST00000615335 IGHV3-16A0A0C4DH30 117 aa9.43□□□□□ -0.9
FOXN3-219ENST00000615335 COX7A2LO14548 114 aa9.43□□□□□ -0.9
FOXN3-219ENST00000615335 FAM74A4Q5TZK3 123 aa9.43□□□□□ -0.9
FOXN3-219ENST00000615335 PKD1L1Q8TDX9 2849 aa9.43□□□□□ -0.9
FOXN3-219ENST00000615335 IGKV3-20P01619 116 aa9.43□□□□□ -0.9
FOXN3-219ENST00000615335 TRBV6-5A0A0K0K1A5 114 aa9.42□□□□□ -0.9
FOXN3-219ENST00000615335 TRBV27A0A0K0K1C4 114 aa9.42□□□□□ -0.9
FOXN3-219ENST00000615335 EPM2AB3EWF7 344 aa9.42□□□□□ -0.9
FOXN3-219ENST00000615335 TIRAPP58753 221 aa9.42□□□□□ -0.9
FOXN3-219ENST00000615335 LINC00336Q6ZUF6 198 aa9.42□□□□□ -0.9
FOXN3-219ENST00000615335 TRAV12-2A0A075B6T6 113 aa9.42□□□□□ -0.9
FOXN3-219ENST00000615335 RPL35AP18077 110 aaKnown RBP9.42□□□□□ -0.9
FOXN3-219ENST00000615335 SERP1Q9Y6X1 66 aa9.42□□□□□ -0.9
FOXN3-219ENST00000615335 V9GYY9 64 aa9.42□□□□□ -0.9
FOXN3-219ENST00000615335 ANK2Q01484 3957 aa9.41□□□□□ -0.9
FOXN3-219ENST00000615335 TIMM17BO60830 172 aa9.41□□□□□ -0.9
FOXN3-219ENST00000615335 USP17L23D6RBM5 183 aa9.4□□□□□ -0.9
FOXN3-219ENST00000615335 IGHV3-30-3P0DP02 117 aa9.4□□□□□ -0.9
FOXN3-219ENST00000615335 IGHV1OR15-1A0A075B7D0 117 aa9.4□□□□□ -0.91
FOXN3-219ENST00000615335 M0QY20 66 aa9.4□□□□□ -0.91
FOXN3-219ENST00000615335 BAALC-AS2P0C853 105 aa9.4□□□□□ -0.91
FOXN3-219ENST00000615335 DEFB131AP59861 70 aa9.4□□□□□ -0.91
FOXN3-219ENST00000615335 IGHV3-64A0A075B6Q5 118 aa9.39□□□□□ -0.91
FOXN3-219ENST00000615335 SPINK13Q1W4C9 94 aa9.39□□□□□ -0.91
FOXN3-219ENST00000615335 MAP6D1Q9H9H5 199 aa9.39□□□□□ -0.91
FOXN3-219ENST00000615335 FAM236DA0A1B0GTK5 79 aa9.38□□□□□ -0.91
FOXN3-219ENST00000615335 FAM236CP0DP71 79 aa9.38□□□□□ -0.91
FOXN3-219ENST00000615335 ADAMTSL4-AS1Q5T5F5 129 aa9.38□□□□□ -0.91
FOXN3-219ENST00000615335 NDUFA12Q9UI09 145 aa9.37□□□□□ -0.91
FOXN3-219ENST00000615335 DNAL4O96015 105 aa9.37□□□□□ -0.91
FOXN3-219ENST00000615335 ODF3L2Q3SX64 289 aa9.37□□□□□ -0.91
FOXN3-219ENST00000615335 OXLD1Q5BKU9 147 aa9.37□□□□□ -0.91
FOXN3-219ENST00000615335 PKIGQ9Y2B9 76 aa9.37□□□□□ -0.91
FOXN3-219ENST00000615335 FHL2Q14192 279 aa9.36□□□□□ -0.91
FOXN3-219ENST00000615335 BEAN1Q3B7T3 259 aa9.36□□□□□ -0.91
FOXN3-219ENST00000615335 IGHV1-58A0A0C4DH39 117 aa9.36□□□□□ -0.91
FOXN3-219ENST00000615335 MRPS36P82909 103 aaKnown RBP9.36□□□□□ -0.91
FOXN3-219ENST00000615335 TMEM243Q9BU79 118 aa9.36□□□□□ -0.91
FOXN3-219ENST00000615335 KNCNA6PVL3 124 aa9.35□□□□□ -0.91
FOXN3-219ENST00000615335 COPS9Q8WXC6 57 aa9.35□□□□□ -0.91
FOXN3-219ENST00000615335 OPRPNQ99935 248 aaPredicted RBP9.35□□□□□ -0.91
FOXN3-219ENST00000615335 CMYA5Q8N3K9 4069 aa9.35□□□□□ -0.91
FOXN3-219ENST00000615335 A0A0J9YXV3 536 aa9.35□□□□□ -0.91
FOXN3-219ENST00000615335 CMC4P56277 68 aaPredicted RBP9.35□□□□□ -0.91
FOXN3-219ENST00000615335 C20orf203Q8NBC4 194 aa9.34□□□□□ -0.91
FOXN3-219ENST00000615335 SMIM26A0A096LP01 95 aa9.34□□□□□ -0.91
FOXN3-219ENST00000615335 C1orf195Q5TG92 126 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms