RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 NACAE9PAV3 2078 aa8.06□□□□□ -1.12
ATF3-211ENST00000613954 TRACP01848 142 aa8.05□□□□□ -1.12
ATF3-211ENST00000613954 DAND5Q8N907 189 aa8.05□□□□□ -1.12
ATF3-211ENST00000613954 C11orf72Q8NBR9 251 aa8.05□□□□□ -1.12
ATF3-211ENST00000613954 LINC01587Q99440 93 aa8.05□□□□□ -1.12
ATF3-211ENST00000613954 IGHV3-38A0A0C4DH36 116 aa8.05□□□□□ -1.12
ATF3-211ENST00000613954 RBMY1BA6NDE4 496 aaKnown RBP8.05□□□□□ -1.12
ATF3-211ENST00000613954 RBMY1EA6NEQ0 496 aaKnown RBP8.05□□□□□ -1.12
ATF3-211ENST00000613954 RBMY1DP0C7P1 496 aaKnown RBP8.05□□□□□ -1.12
ATF3-211ENST00000613954 DYNLRB2Q8TF09 96 aa8.05□□□□□ -1.12
ATF3-211ENST00000613954 Q9UF83 564 aa8.05□□□□□ -1.12
ATF3-211ENST00000613954 CSDC2Q9Y534 153 aaKnown RBP8.05□□□□□ -1.12
ATF3-211ENST00000613954 NOTCH2Q04721 2471 aa8.04□□□□□ -1.12
ATF3-211ENST00000613954 IGHV3OR16-12A0A075B7B8 117 aa8.04□□□□□ -1.12
ATF3-211ENST00000613954 TRAV25A0A0B4J276 109 aa8.04□□□□□ -1.12
ATF3-211ENST00000613954 INSP01308 110 aa8.04□□□□□ -1.12
ATF3-211ENST00000613954 LINC00242Q5T6M2 205 aa8.04□□□□□ -1.12
ATF3-211ENST00000613954 MEIG1Q5JSS6 88 aa8.03□□□□□ -1.12
ATF3-211ENST00000613954 MTORP42345 2549 aa8.03□□□□□ -1.12
ATF3-211ENST00000613954 PF4P02776 101 aa8.03□□□□□ -1.12
ATF3-211ENST00000613954 COX6A2Q02221 97 aa8.03□□□□□ -1.12
ATF3-211ENST00000613954 DEFB114Q30KQ6 69 aa8.03□□□□□ -1.12
ATF3-211ENST00000613954 LINC00643Q86TS7 51 aa8.03□□□□□ -1.12
ATF3-211ENST00000613954 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.03□□□□□ -1.12
ATF3-211ENST00000613954 SMIM1B2RUZ4 78 aa8.02□□□□□ -1.13
ATF3-211ENST00000613954 FAM222AQ5U5X8 452 aa8.02□□□□□ -1.13
ATF3-211ENST00000613954 TRBV10-1A0A0K0K1A3 114 aa8.02□□□□□ -1.13
ATF3-211ENST00000613954 ATP5G1P05496 136 aa8.02□□□□□ -1.13
ATF3-211ENST00000613954 INAFM2P0DMQ5 153 aa8.02□□□□□ -1.13
ATF3-211ENST00000613954 PRIMA1Q86XR5 153 aa8.02□□□□□ -1.13
ATF3-211ENST00000613954 CHCHD5Q9BSY4 110 aa8.02□□□□□ -1.13
ATF3-211ENST00000613954 MAP6D1Q9H9H5 199 aa8.02□□□□□ -1.13
ATF3-211ENST00000613954 PRM2P04554 102 aa8.01□□□□□ -1.13
ATF3-211ENST00000613954 RPL36AP83881 106 aaKnown RBP8.01□□□□□ -1.13
ATF3-211ENST00000613954 DAZ2Q13117 558 aaKnown RBP8.01□□□□□ -1.13
ATF3-211ENST00000613954 DAZ4Q86SG3 579 aaKnown RBP8.01□□□□□ -1.13
ATF3-211ENST00000613954 RPL36ALQ969Q0 106 aaKnown RBP8.01□□□□□ -1.13
ATF3-211ENST00000613954 ZNF625Q96I27 306 aaPredicted RBP8.01□□□□□ -1.13
ATF3-211ENST00000613954 DAZ3Q9NR90 486 aaKnown RBP8.01□□□□□ -1.13
ATF3-211ENST00000613954 OVOL2Q9BRP0 275 aa8□□□□□ -1.13
ATF3-211ENST00000613954 NF1P21359 2839 aa8□□□□□ -1.13
ATF3-211ENST00000613954 TRAV13-2A0A0B4J235 113 aa8□□□□□ -1.13
ATF3-211ENST00000613954 BAALC-AS2P0C853 105 aa8□□□□□ -1.13
ATF3-211ENST00000613954 CXCL5P42830 114 aa8□□□□□ -1.13
ATF3-211ENST00000613954 SOSTDC1Q6X4U4 206 aa8□□□□□ -1.13
ATF3-211ENST00000613954 SDIM1Q6ZPB5 146 aa8□□□□□ -1.13
ATF3-211ENST00000613954 FAM236AA0A1B0GUQ0 79 aa7.99□□□□□ -1.13
ATF3-211ENST00000613954 FAM236BA0A1B0GV22 79 aa7.99□□□□□ -1.13
ATF3-211ENST00000613954 SORL1Q92673 2214 aa7.99□□□□□ -1.13
ATF3-211ENST00000613954 A0A0U1RRA0 63 aa7.98□□□□□ -1.13
ATF3-211ENST00000613954 TRAV13-1A0A0B4J241 112 aa7.98□□□□□ -1.13
ATF3-211ENST00000613954 K7EQD1 137 aa7.98□□□□□ -1.13
ATF3-211ENST00000613954 RPL28P46779 137 aaKnown RBP7.98□□□□□ -1.13
ATF3-211ENST00000613954 KRTAP10-3P60369 221 aa7.98□□□□□ -1.13
ATF3-211ENST00000613954 CDC42SE2Q9NRR3 84 aa7.98□□□□□ -1.13
ATF3-211ENST00000613954 F5H768 121 aa7.97□□□□□ -1.13
ATF3-211ENST00000613954 LINC00694P0DN24 101 aa7.97□□□□□ -1.13
ATF3-211ENST00000613954 IL17DQ8TAD2 202 aa7.97□□□□□ -1.13
ATF3-211ENST00000613954 CUBNO60494 3623 aa7.97□□□□□ -1.13
ATF3-211ENST00000613954 HIVEP1P15822 2718 aa7.97□□□□□ -1.13
ATF3-211ENST00000613954 NSD1Q96L73 2696 aaPredicted RBP7.96□□□□□ -1.14
ATF3-211ENST00000613954 TRGV1A0A0A0MS02 117 aa7.96□□□□□ -1.14
ATF3-211ENST00000613954 CRPP02741 224 aa7.96□□□□□ -1.14
ATF3-211ENST00000613954 SMCR5Q8TEV8 140 aa7.96□□□□□ -1.14
ATF3-211ENST00000613954 UBE2L6O14933 153 aa7.95□□□□□ -1.14
ATF3-211ENST00000613954 UQCRQO14949 82 aa7.95□□□□□ -1.14
ATF3-211ENST00000613954 MALP21145 153 aa7.95□□□□□ -1.14
ATF3-211ENST00000613954 OXLD1Q5BKU9 147 aa7.95□□□□□ -1.14
ATF3-211ENST00000613954 A0A1B0GX51 115 aa7.95□□□□□ -1.14
ATF3-211ENST00000613954 SMIM9A6NGZ8 99 aa7.95□□□□□ -1.14
ATF3-211ENST00000613954 NTM-AS1Q6ZSK4 140 aa7.95□□□□□ -1.14
ATF3-211ENST00000613954 STHQ8IWL8 128 aa7.95□□□□□ -1.14
ATF3-211ENST00000613954 C3orf22Q8N5N4 141 aa7.95□□□□□ -1.14
ATF3-211ENST00000613954 OR13C6PQ8NH95 151 aa7.95□□□□□ -1.14
ATF3-211ENST00000613954 XCL2Q9UBD3 114 aa7.95□□□□□ -1.14
ATF3-211ENST00000613954 FN1P02751 2386 aaKnown RBP7.94□□□□□ -1.14
ATF3-211ENST00000613954 ODF3L2Q3SX64 289 aa7.94□□□□□ -1.14
ATF3-211ENST00000613954 C5orf38Q86SI9 138 aa7.94□□□□□ -1.14
ATF3-211ENST00000613954 FAM218AQ96MZ4 157 aa7.94□□□□□ -1.14
ATF3-211ENST00000613954 DNAL4O96015 105 aa7.93□□□□□ -1.14
ATF3-211ENST00000613954 IGLV1-51P01701 117 aa7.93□□□□□ -1.14
ATF3-211ENST00000613954 CMC4P56277 68 aaPredicted RBP7.93□□□□□ -1.14
ATF3-211ENST00000613954 TMEM243Q9BU79 118 aa7.93□□□□□ -1.14
ATF3-211ENST00000613954 SETXQ7Z333 2677 aaKnown RBP7.93□□□□□ -1.14
ATF3-211ENST00000613954 H0YGX0 51 aa7.93□□□□□ -1.14
ATF3-211ENST00000613954 J3KT08 172 aa7.93□□□□□ -1.14
ATF3-211ENST00000613954 RPS28P62857 69 aaKnown RBP7.93□□□□□ -1.14
ATF3-211ENST00000613954 C9orf153Q5TBE3 101 aa7.93□□□□□ -1.14
ATF3-211ENST00000613954 GAGE2AQ6NT46 116 aa7.93□□□□□ -1.14
ATF3-211ENST00000613954 C1orf158Q8N1D5 194 aa7.93□□□□□ -1.14
ATF3-211ENST00000613954 COX7B2Q8TF08 81 aa7.93□□□□□ -1.14
ATF3-211ENST00000613954 C22orf24Q9Y442 160 aa7.93□□□□□ -1.14
ATF3-211ENST00000613954 LINC00482Q8N8I6 264 aa7.92□□□□□ -1.14
ATF3-211ENST00000613954 LINC00526Q96FQ7 95 aa7.92□□□□□ -1.14
ATF3-211ENST00000613954 SND1-IT1Q9HBX3 110 aa7.92□□□□□ -1.14
ATF3-211ENST00000613954 BAHCC1Q9P281 2608 aa7.91□□□□□ -1.14
ATF3-211ENST00000613954 MIR7-3HGQ8N6C7 128 aa7.91□□□□□ -1.14
ATF3-211ENST00000613954 SETD2Q9BYW2 2564 aaPredicted RBP7.9□□□□□ -1.14
ATF3-211ENST00000613954 ATOX1O00244 68 aa7.9□□□□□ -1.14
ATF3-211ENST00000613954 Q6ZTI0 123 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms