RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 DSCAML1Q8TD84 2053 aa3.73□□□□□ -1.81
CCL16-206ENST00000613642 SHANK1Q9Y566 2161 aa3.73□□□□□ -1.81
CCL16-206ENST00000613642 SPTBP11277 2137 aa3.73□□□□□ -1.81
CCL16-206ENST00000613642 MYO15AQ9UKN7 3530 aa3.73□□□□□ -1.81
CCL16-206ENST00000613642 IGHV3OR16-8A0A075B7F1 116 aa3.72□□□□□ -1.81
CCL16-206ENST00000613642 KRTAP29-1A8MX34 341 aaPredicted RBP3.72□□□□□ -1.81
CCL16-206ENST00000613642 IGHV3-11P01762 117 aa3.72□□□□□ -1.81
CCL16-206ENST00000613642 CNBPP62633 177 aaKnown RBP3.72□□□□□ -1.81
CCL16-206ENST00000613642 RNASE13Q5GAN3 156 aaKnown RBP3.72□□□□□ -1.81
CCL16-206ENST00000613642 MYO7BQ6PIF6 2116 aa3.72□□□□□ -1.81
CCL16-206ENST00000613642 Q6ZQT0 140 aa3.72□□□□□ -1.81
CCL16-206ENST00000613642 CSNK1G2-AS1Q8NCQ2 148 aa3.72□□□□□ -1.81
CCL16-206ENST00000613642 MUC7Q8TAX7 377 aa3.72□□□□□ -1.81
CCL16-206ENST00000613642 FGF23Q9GZV9 251 aaPredicted RBP3.72□□□□□ -1.81
CCL16-206ENST00000613642 PLAC8Q9NZF1 115 aa3.72□□□□□ -1.81
CCL16-206ENST00000613642 TRIOO75962 3097 aa3.72□□□□□ -1.81
CCL16-206ENST00000613642 ZDBF2Q9HCK1 2354 aa3.71□□□□□ -1.81
CCL16-206ENST00000613642 FER1L5A0AVI2 2057 aa3.71□□□□□ -1.82
CCL16-206ENST00000613642 IGHV4OR15-8A0A075B7B6 117 aa3.71□□□□□ -1.82
CCL16-206ENST00000613642 IGLV5-45A0A087WSX0 123 aa3.71□□□□□ -1.82
CCL16-206ENST00000613642 A0A087WW49 117 aa3.71□□□□□ -1.82
CCL16-206ENST00000613642 IGHV3-21A0A0B4J1V1 117 aa3.71□□□□□ -1.82
CCL16-206ENST00000613642 H3BPC8 53 aa3.71□□□□□ -1.82
CCL16-206ENST00000613642 GAS8-AS1O95177 125 aa3.71□□□□□ -1.82
CCL16-206ENST00000613642 Q8NDZ9 215 aa3.71□□□□□ -1.82
CCL16-206ENST00000613642 COX7B2Q8TF08 81 aa3.71□□□□□ -1.82
CCL16-206ENST00000613642 CAMK2N2Q96S95 79 aa3.71□□□□□ -1.82
CCL16-206ENST00000613642 DPM3Q9P2X0 92 aa3.71□□□□□ -1.82
CCL16-206ENST00000613642 TECTAO75443 2155 aa3.7□□□□□ -1.82
CCL16-206ENST00000613642 IGHV3-49A0A0A0MS15 119 aa3.7□□□□□ -1.82
CCL16-206ENST00000613642 IGHV3-38A0A0C4DH36 116 aa3.7□□□□□ -1.82
CCL16-206ENST00000613642 CGB3P0DN86 165 aa3.7□□□□□ -1.82
CCL16-206ENST00000613642 CGB7P0DN87 165 aa3.7□□□□□ -1.82
CCL16-206ENST00000613642 IGHV4-38-2P0DP08 117 aa3.7□□□□□ -1.82
CCL16-206ENST00000613642 KRTAP10-9P60411 292 aa3.7□□□□□ -1.82
CCL16-206ENST00000613642 SPAG11BQ08648 103 aa3.7□□□□□ -1.82
CCL16-206ENST00000613642 C9orf129Q5T035 196 aaKnown RBP3.7□□□□□ -1.82
CCL16-206ENST00000613642 SPAG11AQ6PDA7 123 aa3.7□□□□□ -1.82
CCL16-206ENST00000613642 NPBQ8NG41 125 aa3.7□□□□□ -1.82
CCL16-206ENST00000613642 MSRB1Q9NZV6 116 aa3.7□□□□□ -1.82
CCL16-206ENST00000613642 ZNF580Q9UK33 172 aa3.7□□□□□ -1.82
CCL16-206ENST00000613642 BRWD1Q9NSI6 2320 aa3.7□□□□□ -1.82
CCL16-206ENST00000613642 ZFHX2Q9C0A1 2572 aaPredicted RBP3.69□□□□□ -1.82
CCL16-206ENST00000613642 HEATR5BQ9P2D3 2071 aa3.69□□□□□ -1.82
CCL16-206ENST00000613642 VPS13AQ96RL7 3174 aa3.69□□□□□ -1.82
CCL16-206ENST00000613642 IGKV1D-37A0A075B6S9 117 aa3.69□□□□□ -1.82
CCL16-206ENST00000613642 IGKV3D-15A0A087WSY6 115 aa3.69□□□□□ -1.82
CCL16-206ENST00000613642 A0A087WSZ3 146 aa3.69□□□□□ -1.82
CCL16-206ENST00000613642 A0A087WYN8 130 aa3.69□□□□□ -1.82
CCL16-206ENST00000613642 LECT2O14960 151 aa3.69□□□□□ -1.82
CCL16-206ENST00000613642 MIR22HGQ0VDD5 57 aa3.69□□□□□ -1.82
CCL16-206ENST00000613642 KPRPQ5T749 579 aaPredicted RBP3.69□□□□□ -1.82
CCL16-206ENST00000613642 TMEM105Q8N8V8 129 aa3.69□□□□□ -1.82
CCL16-206ENST00000613642 Q8NAQ8 132 aa3.69□□□□□ -1.82
CCL16-206ENST00000613642 WFDC10AQ9H1F0 79 aa3.69□□□□□ -1.82
CCL16-206ENST00000613642 INTS1Q8N201 2190 aaKnown RBP3.69□□□□□ -1.82
CCL16-206ENST00000613642 ZFHX4Q86UP3 3567 aa3.68□□□□□ -1.82
CCL16-206ENST00000613642 A0A1W2PNM2 257 aa3.68□□□□□ -1.82
CCL16-206ENST00000613642 IGKV2-29A2NJV5 120 aaPredicted RBP3.68□□□□□ -1.82
CCL16-206ENST00000613642 NDUFA4O00483 81 aa3.68□□□□□ -1.82
CCL16-206ENST00000613642 LINC01565O15544 149 aa3.68□□□□□ -1.82
CCL16-206ENST00000613642 IGKV3-11P04433 115 aa3.68□□□□□ -1.82
CCL16-206ENST00000613642 POLR2KP53803 58 aaKnown RBP3.68□□□□□ -1.82
CCL16-206ENST00000613642 PTPRZ1P23471 2315 aaPredicted RBP3.68□□□□□ -1.82
CCL16-206ENST00000613642 PRRC2AP48634 2157 aaKnown RBP3.68□□□□□ -1.82
CCL16-206ENST00000613642 MED12Q93074 2177 aa3.68□□□□□ -1.82
CCL16-206ENST00000613642 DNAH14Q0VDD8 3507 aa3.67□□□□□ -1.82
CCL16-206ENST00000613642 CACNA1BQ00975 2339 aa3.67□□□□□ -1.82
CCL16-206ENST00000613642 DMDP11532 3685 aa3.67□□□□□ -1.82
CCL16-206ENST00000613642 SPTBN4Q9H254 2564 aa3.67□□□□□ -1.82
CCL16-206ENST00000613642 DMXL1Q9Y485 3027 aa3.67□□□□□ -1.82
CCL16-206ENST00000613642 ETDCA0A1B0GVM5 59 aa3.67□□□□□ -1.82
CCL16-206ENST00000613642 INAFM1C9JVW0 142 aa3.67□□□□□ -1.82
CCL16-206ENST00000613642 IGLV1-47P01700 117 aa3.67□□□□□ -1.82
CCL16-206ENST00000613642 IGHV3-23P01764 117 aa3.67□□□□□ -1.82
CCL16-206ENST00000613642 IGHV3-53P01767 116 aa3.67□□□□□ -1.82
CCL16-206ENST00000613642 CMC4P56277 68 aaPredicted RBP3.67□□□□□ -1.82
CCL16-206ENST00000613642 LUZP6Q538Z0 58 aa3.67□□□□□ -1.82
CCL16-206ENST00000613642 CASC10Q5T4H9 136 aa3.67□□□□□ -1.82
CCL16-206ENST00000613642 FAM27BQ5VT28 67 aa3.67□□□□□ -1.82
CCL16-206ENST00000613642 CSAG1Q6PB30 78 aa3.67□□□□□ -1.82
CCL16-206ENST00000613642 ARFGEF3Q5TH69 2177 aa3.67□□□□□ -1.82
CCL16-206ENST00000613642 ESPL1Q14674 2120 aa3.67□□□□□ -1.82
CCL16-206ENST00000613642 IGHV7-4-1A0A0J9YVY3 117 aa3.66□□□□□ -1.82
CCL16-206ENST00000613642 H3BRN7 92 aa3.66□□□□□ -1.82
CCL16-206ENST00000613642 CLPSP04118 112 aa3.66□□□□□ -1.82
CCL16-206ENST00000613642 IGHV1-8P0DP01 117 aa3.66□□□□□ -1.82
CCL16-206ENST00000613642 EGFEM1PQ0D2K5 195 aa3.66□□□□□ -1.82
CCL16-206ENST00000613642 PRR4Q16378 134 aa3.66□□□□□ -1.82
CCL16-206ENST00000613642 NTM-AS1Q6ZSK4 140 aa3.66□□□□□ -1.82
CCL16-206ENST00000613642 SMIM11BQ8TCY0 68 aa3.66□□□□□ -1.82
CCL16-206ENST00000613642 GAFA1Q96PS6 74 aa3.66□□□□□ -1.82
CCL16-206ENST00000613642 C8orf17Q9NRJ1 99 aa3.66□□□□□ -1.82
CCL16-206ENST00000613642 MED13Q9UHV7 2174 aa3.66□□□□□ -1.82
CCL16-206ENST00000613642 FAM186AA6NE01 2351 aa3.66□□□□□ -1.82
CCL16-206ENST00000613642 KMT2BQ9UMN6 2715 aaPredicted RBP3.65□□□□□ -1.82
CCL16-206ENST00000613642 CFAP47Q6ZTR5 3102 aa3.65□□□□□ -1.82
CCL16-206ENST00000613642 CLPSL1A2RUU4 121 aa3.65□□□□□ -1.83
CCL16-206ENST00000613642 H0Y9P7 68 aa3.65□□□□□ -1.83
CCL16-206ENST00000613642 IGKV4-1P06312 121 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms